#%Module

module-whatis	        "A pipeline for particle detection in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Topaz also includes methods for micrograph and tomogram denoising using deep denoising models."
module-url		"https://github.com/tbepler/topaz"
module-license	        "https://github.com/tbepler/topaz/blob/master/LICENSE"
module-maintainer	"Greta Assmann  <greta.assmann@psi.ch>"

module-help	"Particle Picker for CryoEM. Used with Cryosparc"

# Check for supported shell types
set shelltype [module-info shelltype]
switch -- $shelltype {
    "sh" {
        puts stdout "conda(){ :; };"
        puts stdout "set +u"
        puts stdout "source \"${PREFIX}\"/miniconda/etc/profile.d/conda.sh;\n"
    }
    default {
        puts stderr "Shells of type '$shelltype' are NOT supported!"
    }
}


switch [module-info mode] {
    "load" {
      # Relies on the anaconda module being loaded since we need to update the path
      puts stdout "conda activate ${P}_${V};\n"
    }
    "unload" -
    "remove" {
        puts stdout "conda deactivate;\n"
    }
}