all build scripts moved to a sub-directory according their name

scripts/System/bash.build

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.add_to_family 'System'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/boost.build

@@ -0,0 +1,48 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+# :TODO: detect compiler
+TOOLSET=gcc
+
+function em.configure() {
+	cd "${MODULE_SRCDIR}"
+	"${MODULE_SRCDIR}"/bootstrap.sh \
+		--prefix="${PREFIX}" \
+		--with-toolset=${TOOLSET} \
+		--with-libraries=all \
+		--with-python-root="${PYTHON_PREFIX}" \
+		|| exit 1
+}
+
+function em.build() {
+	cd "${MODULE_SRCDIR}"
+	./b2 \
+		--build-type=minimal \
+		--build-dir="${MODULE_BUILDDIR}" \
+		--layout=system \
+		--without-mpi \
+		variant=release \
+		link=static \
+		threading=multi \
+		stage
+}
+
+function em.install() {
+	cd "${MODULE_SRCDIR}"
+	./b2 \
+		--build-type=minimal \
+		--build-dir="${MODULE_BUILDDIR}" \
+		--layout=system \
+		--without-mpi \
+		variant=release \
+		link=static \
+		threading=multi \
+		install
+}
+
+em.add_to_family 'Compiler'
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies "${COMPILER}" 'Python'
+em.make_all
+

scripts/System/filebench.build

@@ -0,0 +1,14 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.supported_os 'Linux'
+em.add_to_family 'System'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/fsstress.build

@@ -0,0 +1,24 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	:
+}
+
+function em.build() {
+        cd "${MODULE_SRCDIR}"
+
+	make -j ${JOBS}
+}
+
+function em.install() {
+        cd "${MODULE_SRCDIR}"
+	mkdir -p ${PREFIX}/bin
+	install -m 0755 fsstress "${PREFIX}/bin"
+}
+
+#em.supported_os 'Linux'
+em.add_to_family 'System'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/giflib.build

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.add_to_family 'Libraries'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/gmp.build

@@ -0,0 +1,18 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		--disable-shared \
+		|| exit 1
+}
+
+# use system gcc to compile
+declare -rx CC=gcc
+declare -rx CPP=/usr/bin/cpp
+
+em.add_to_family 'Libraries'
+em.make_all
+

scripts/System/gsl.build

@@ -0,0 +1,31 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.add_to_family 'Compiler'
+em.set_docfiles \
+	'AUTHORS' \
+	'BUGS' \
+	'COPYING' \
+	'ChangeLog' \
+	'INSTALL' \
+	'NEWS' \
+	'README' \
+	'THANKS' \
+	'TODO'
+
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies "${COMPILER}"
+em.make_all
+
+# Local Variables:
+# mode: sh
+# sh-basic-offset: 8
+# tab-width: 8
+# End:

scripts/System/hdf5.build

@@ -0,0 +1,33 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	CC=$MPICC
+	CXX=$MPICXX
+	F77=$MPIF77
+	F90=$MPIF90
+	FC=$MPIFC
+	FORTRAN=$MPIFORTRAN
+
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		--enable-shared \
+		--enable-parallel \
+		--enable-cxx \
+		--enable-unsupported \
+		--with-pic \
+		|| exit 1
+}
+
+
+em.add_to_family 'MPI'
+em.set_runtime_dependencies "${COMPILER}" "${MPI}"
+em.set_build_dependencies "${COMPILER}" "${MPI}"
+em.set_docfiles \
+		ACKNOWLEDGMENTS \
+		COPYING \
+		MANIFEST \
+		README.txt
+em.make_all
+

scripts/System/hdf5_serial.build

@@ -0,0 +1,19 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		--enable-shared \
+		--enable-cxx \
+		--enable-unsupported \
+		--with-pic \
+		|| exit 1
+}
+
+em.add_to_family 'Compiler'
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies "${COMPILER}"
+em.make_all
+

scripts/System/ippl.build

@@ -0,0 +1,26 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	CC=$MPICC
+	CXX=$MPICXX
+	F77=$MPIF77
+	F90=$MPIF90
+	FC=$MPIFC
+	FORTRAN=$MPIFORTRAN
+
+	rm -f CMakeCache.txt
+	cmake \
+		-DCMAKE_BUILD_TYPE=RELEASE \
+		-DCMAKE_INSTALL_PREFIX="${PREFIX}" \
+		"${MODULE_SRCDIR}" \
+		|| exit 1 
+}
+
+em.add_to_family 'MPI'
+em.set_runtime_dependencies "${COMPILER}" "${MPI}"
+em.set_build_dependencies 'cmake' "${COMPILER}" "${MPI}"
+em.set_docfiles LICENSE README
+em.make_all
+

scripts/System/libungif.build

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.add_to_family 'Libraries'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/mathlib.build

@@ -0,0 +1,50 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	:
+}
+
+function em.build() {
+	cd "${MODULE_SRCDIR}"
+
+
+	install -m 0755 -d "${PREFIX}/include"
+	install -m 0755 -d "${PREFIX}/lib"
+	install -m 0755 -d "${DOCDIR}/lapack"
+
+	(
+		cp make.inc.blas BLAS/make.inc
+		cd BLAS
+		make -e -j3 || exit 1
+		install -m 0644 libblas.a "${PREFIX}/lib" || exit 1
+	) || exit 1
+
+	(
+		cp make.inc.cblas CBLAS/Makefile.in
+		cd CBLAS
+		make -e || exit 1
+		install -m 0644 include/* "${PREFIX}/include" || exit 1
+		install -m 0644 lib/* "${PREFIX}/lib" || exit 1
+	) || exit 1
+	(
+		cp make.inc.lapack lapack/make.inc
+		cd lapack
+		make -e -j3 || exit 1
+		make -e -j3 lapackelib || exit 1
+		install -m 0644 lapacke/include/* "${PREFIX}/include" || exit 1
+		install -m 0644 lib*.a "${PREFIX}/lib" || exit 1
+		install -m 0444 README LICENSE "${DOCDIR}/lapack"
+	) || exit 1
+}
+
+function em.install() {
+	:
+}
+
+em.add_to_family 'Compiler'
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies "${COMPILER}"
+em.make_all
+em.cleanup_src

scripts/System/mpc.build

@@ -0,0 +1,21 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		--with-gmp=$GMP_PREFIX \
+		--with-mpfr=$MPFR_PREFIX \
+		--disable-shared \
+		|| exit 1
+}
+
+# use system gcc to compile
+declare -rx CC=gcc
+
+module use 'Libraries'
+em.add_to_family 'Libraries'
+em.set_build_dependencies 'gmp' 'mpfr'
+em.make_all
+

scripts/System/mpfr.build

@@ -0,0 +1,20 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		--with-gmp=$GMP_PREFIX \
+		--disable-shared \
+		|| exit 1
+}
+
+# use system gcc to compile
+declare -rx CC=gcc
+
+module use 'Libraries'
+
+em.add_to_family 'Libraries'
+em.set_build_dependencies 'gmp'
+em.make_all

scripts/System/nmap.build

@@ -0,0 +1,29 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	cd "${MODULE_SRCDIR}"
+	./configure \
+		--prefix="${PREFIX}" \
+		--with-libpcap=included \
+		--with-libpcre=included \
+		--with-libdnet=included \
+		--with-liblua=included \
+		--with-liblinear=included
+}
+
+function em.build() {
+	cd "${MODULE_SRCDIR}"
+	make -j "${JOBS}"
+}
+
+function em.install() {
+	cd "${MODULE_SRCDIR}"
+	make install
+}
+
+em.release 'unstable'
+em.add_to_family 'System'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/openmpi.build

@@ -0,0 +1,22 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		--enable-mpi-cxx \
+		--enable-mpi-cxx-seek \
+		--enable-mpi-f90 \
+		--enable-mpi-profile \
+		--enable-shared \
+		--enable-smp-locks \
+		|| exit 1
+}
+
+
+em.add_to_family 'Compiler'
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies "${COMPILER}"
+em.set_docfiles 'AUTHORS' 'LICENSE' 'NEWS' 'README'
+em.make_all

scripts/System/optPilot.build

@@ -0,0 +1,20 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+module use unstable
+
+# add -fopenmp to CC and CXX, if you want to compile with OpenMP
+function em.configure() {
+	cmake \
+		-DCMAKE_INSTALL_PREFIX="${PREFIX}" \
+		-DCMAKE_BUILD_TYPE=RELEASE \
+		"${MODULE_SRCDIR}"
+}
+
+em.add_to_family 'MPI'
+em.set_runtime_dependencies "${COMPILER}" "${MPI}"
+em.set_build_dependencies 'cmake' "${COMPILER}" "${MPI}" 'boost' 'hdf5' 'H5hut' 'trilinos' 'ippl' 'gsl' 'boost' 'OPAL'
+em.set_supported_compilers 'gcc/4.7' 'gcc/4.8'
+em.make_all
+

scripts/System/parmetis.build

@@ -0,0 +1,53 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	CC=$MPICC
+	CXX=$MPICXX
+	F77=$MPIF77
+	F90=$MPIF90
+	FC=$MPIFC
+	FORTRAN=$MPIFORTRAN
+}
+
+function em.build() {
+	local -ri MAJOR_VERSION=${V%%.*}
+	if (( MAJOR_VERSION == 3 )) ; then
+		cd "${MODULE_SRCDIR}"
+		make -e -j3 || exit 1
+
+		mkdir -p $PREFIX/include/metis
+		mkdir -p $PREFIX/lib
+
+		cp *.h $PREFIX/include
+		cp METISLib/*.h $PREFIX/include/metis
+		cp lib*.a $PREFIX/lib
+	elif (( MAJOR_VERSION == 4 )); then
+		cd "${MODULE_SRCDIR}"
+		make config prefix=$PREFIX || exit 1
+		make -j3 || exit 1
+		make install
+
+		LIBMETIS_A=$(find . -name libmetis.a)
+		METIS_H=$(find . -name metis.h)
+
+		install -m 0644 $METIS_H    $PREFIX/include
+		install -m 0644 $LIBMETIS_A $PREFIX/lib
+	else
+		die 42 "Unsupported version: $V"
+	fi
+}
+
+function em.install() {
+	:
+}
+
+
+em.add_to_family 'MPI'
+em.set_runtime_dependencies "${COMPILER}" "${MPI}"
+em.set_build_dependencies "${COMPILER}" "${MPI}"
+em.set_docfiles 'CHANGES' 'INSTALL' 'LICENSE.txt' 'README' 'VERSION' 
+em.make_all
+em.cleanup_src
+

scripts/System/patchelf.build

@@ -0,0 +1,14 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.supported_os 'Linux'
+em.add_to_family 'System'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/root.build

@@ -0,0 +1,72 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+case ${OS} in
+Darwin )
+	# cocoa doesn't work with GCC!?
+	#config_args='--enable-cocoa --disable-x11'
+	config_args='--with-finkdir=/opt/X11 --disable-cocoa'
+	;;
+*)
+	;;
+esac
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--disable-ldap \
+		--disable-mysql \
+		--disable-opengl \
+		--disable-python \
+		--enable-fftw3 \
+		--with-cc=${CC} \
+		--with-cxx=${CXX} \
+		--with-f77=${F77} \
+		--with-ld=${CXX} \
+		${config_args} \
+		|| exit 1
+}
+
+function em.build() {
+	make -j 4
+}
+
+function em.install() {
+	make clean
+
+	rm -f  Makefile
+	rm -rf config.*
+	rm -rf core
+	rm -rf io
+	rm -rf math
+	rm -rf net
+	rm -rf hist
+	rm -rf tree
+	rm -rf graf2d
+	rm -rf graf3d
+	rm -rf gui
+	rm -rf html
+	rm -rf montecarlo
+	rm -rf geom
+	rm -rf proof
+	rm -rf sql
+	rm -rf misc
+	rm -rf test
+	rm -rf tmva
+	rm -rf tutorials
+	rm -rf rootx
+
+	mkdir -p share
+	mv man share
+
+	mkdir -p "${PREFIX}"
+	cp -rv * "${PREFIX}"
+	mkdir -p "${DOCDIR}"
+	mv "${PREFIX}/LICENSE" "${DOCDIR}"
+	mv "${PREFIX}/README"  "${DOCDIR}"
+}
+
+em.add_to_family 'Compiler'
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/tiff.build

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	"${MODULE_SRCDIR}"/configure \
+		--prefix="${PREFIX}" \
+		|| exit 1
+}
+
+em.add_to_family 'Libraries'
+em.set_build_dependencies "${COMPILER}"
+em.make_all

scripts/System/trilinos.build

@@ -0,0 +1,71 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+declare -rx AR=ar
+
+function em.configure() {
+	BLAS_PREFIX=$OPENBLAS_PREFIX
+	LAPACK_PREFIX=$OPENBLAS_PREFIX
+
+	PARMETIS_INCLUDE_DIRS=$PARMETIS_PREFIX/include
+	PARMETIS_LIBRARIES=$PARMETIS_PREFIX/lib/libparmetis.a
+
+	METIS_INCLUDE_DIRS=$PARMETIS_PREFIX/include/metis
+	METIS_LIBRARIES=$PARMETIS_PREFIX/lib/libmetis.a
+
+	BLAS_INCLUDE_DIRS="$BLAS_PREFIX/include"
+	BLAS_LIBRARY_DIRS="$BLAS_PREFIX/lib"
+	BLAS_LIBRARY_NAMES="openblas"
+
+	LAPACK_INCLUDE_DIRS="$LAPACK_PREFIX/include"
+	LAPACK_LIBRARY_DIRS="$LAPACK_PREFIX/lib"
+	LAPACK_LIBRARY_NAMES="openblas"
+
+	cmake \
+           --prefix=$PREFIX \
+           -DCMAKE_INSTALL_PREFIX:PATH=$PREFIX \
+           -DCMAKE_CXX_FLAGS:STRING="-DMPICH_IGNORE_CXX_SEEK -fPIC -fpermissive" \
+           -DCMAKE_C_FLAGS:STRING="-DMPICH_IGNORE_CXX_SEEK -fPIC" \
+           -DCMAKE_Fortran_FLAGS:STRING="-fPIC" \
+           -D CMAKE_BUILD_TYPE:STRING=DEBUG \
+           -D TPL_ENABLE_QT:BOOL=OFF \
+           -D TPL_ENABLE_MPI:BOOL=ON \
+           -D TPL_ENABLE_BLAS:BOOL=ON \
+           -D TPL_ENABLE_LAPACK:BOOL=ON \
+           -D TPL_ENABLE_METIS:BOOL=ON \
+           -D TPL_ENABLE_ParMETIS:BOOL=ON \
+           -D BLAS_LIBRARY_DIRS:PATH="$BLAS_LIBRARY_DIRS" \
+           -D BLAS_INCLUDE_DIRS:PATH="$BLAS_LIBRARY_DIRS" \
+           -D BLAS_LIBRARY_NAMES:STRING="$BLAS_LIBRARY_NAMES" \
+           -D LAPACK_LIBRARY_DIRS:PATH="$LAPACK_LIBRARY_DIRS" \
+           -D LAPACK_INCLUDE_DIRS:PATH="$LAPACK_INCLUDE_DIRS" \
+           -D LAPACK_LIBRARY_NAMES:STRING="$LAPACK_LIBRARY_NAMES" \
+           -D TPL_METIS_INCLUDE_DIRS:PATH=$METIS_INCLUDE_DIRS \
+           -D TPL_METIS_LIBRARIES:PATH=$METIS_LIBRARIES \
+           -D TPL_ParMETIS_INCLUDE_DIRS:PATH=$PARMETIS_INCLUDE_DIRS \
+           -D TPL_ParMETIS_LIBRARIES:PATH=$PARMETIS_LIBRARIES \
+           -D Trilinos_ENABLE_Amesos:BOOL=ON \
+           -D Trilinos_ENABLE_Amesos2:BOOL=ON \
+           -D Trilinos_ENABLE_AztecOO:BOOL=ON \
+           -D Trilinos_ENABLE_Belos:BOOL=ON \
+           -D Trilinos_ENABLE_Epetra:BOOL=ON \
+           -D Trilinos_ENABLE_EpetraExt:BOOL=ON \
+           -D Trilinos_ENABLE_Galeri:BOOL=ON \
+           -D Trilinos_ENABLE_Ifpack:BOOL=ON \
+           -D Trilinos_ENABLE_Isorropia:BOOL=ON \
+           -D Trilinos_ENABLE_ML:BOOL=ON \
+           -D Trilinos_ENABLE_NOX:BOOL=ON \
+           -D Trilinos_ENABLE_Optika:BOOL=OFF \
+           -D Trilinos_ENABLE_Teuchos:BOOL=ON \
+           -D Trilinos_ENABLE_Tpetra:BOOL=ON \
+           -D Trilinos_ENABLE_TESTS:BOOL=OFF \
+           "${MODULE_SRCDIR}" || exit 1
+}
+
+em.add_to_family 'MPI'
+em.set_runtime_dependencies "${COMPILER}" "${MPI}" 'OpenBLAS' 'parmetis'
+em.set_build_dependencies 'cmake' "${COMPILER}" "${MPI}" 'OpenBLAS' 'parmetis'
+em.set_docfiles Copyright.txt LICENSE README RELEASE_NOTES
+em.make_all
+

scripts/System/vtk.build

@@ -0,0 +1,33 @@
+#!/bin/bash
+#
+# Notes:
+#   On Mac OS X VTK does not compile out of the box with self-compiled GCC.
+#   grep vor "long-branch" and "pascal-string" in the cmake configuration
+#   and remove these strings.
+#
+
+source "$(dirname $0)/../lib/libem.bash"
+
+case ${OS} in
+Darwin )
+	em.pre_configure() {
+		# for the time being: on Mac OS X we need GL/gl.h from MacPorts:
+		append_path C_INLCUDE_PATH '/opt/local/include'
+		append_path CPLUS_INCLUDE_PATH '/opt/local/include'
+	}
+	;;
+esac
+
+function em.configure() {
+	cmake -DCMAKE_INSTALL_PREFIX:PATH=$PREFIX \
+		-DVTK_INSTALL_INCLUDE_DIR:PATH=include \
+		-DVTK_INSTALL_LIB_DIR:PATH=lib \
+		-DVTK_USE_COCOA:BOOL=OFF \
+		"${MODULE_SRCDIR}"
+}
+
+em.add_to_family 'Compiler'
+em.set_runtime_dependencies "${COMPILER}"
+em.set_build_dependencies 'cmake' "${COMPILER}"
+em.make_all
+