Create initial NAMD/2.13 module
The binary build lives in Tools/NAMD; the source build will be in MPI/NAMD.
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34
Tools/NAMD/modulefile
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34
Tools/NAMD/modulefile
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#%Module1.0
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set disclaimer {NAMD is available for Non-Commercial Use only. Before using, please review the
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license (http://www.ks.uiuc.edu/Research/namd/license.html). You should also
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acknowledge the developers:
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"NAMD was developed by the Theoretical and Computational Biophysics Group
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in the Beckman Institute for Advanced Science and Technology at the
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University of Illinois at Urbana-Champaign."
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And cite the reference:
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James C. Phillips, Rosemary Braun, Wei Wang, James Gumbart, Emad
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Tajkhorshid, Elizabeth Villa, Christophe Chipot, Robert D. Skeel, Laxmikant
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Kale, and Klaus Schulten. Scalable molecular dynamics with NAMD. Journal of
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Computational Chemistry, 26:1781-1802, 2005. abstract, journal
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And link the website: http://www.ks.uiuc.edu/Research/namd/}
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module-whatis "Scalable Molecular Dynamics Software"
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module-url "http://www.ks.uiuc.edu/Research/namd/"
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module-license "NAMD Non-Commercial License (http://www.ks.uiuc.edu/Research/namd/license.html)"
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module-maintainer "Spencer Bliven <spencer.bliven@psi.ch"
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module-help "NAMD is a parallel molecular dynamics code designed for high-performance
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simulation of large biomolecular systems. Based on Charm++ parallel objects,
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NAMD scales to hundreds of cores for typical simulations and beyond 500,000
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cores for the largest simulations. NAMD uses the popular molecular graphics
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program VMD for simulation setup and trajectory analysis, but is also
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file-compatible with AMBER, CHARMM, and X-PLOR.
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${disclaimer}"
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puts stderr $disclaimer
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