use Pmodules extended commands in modulefiles (fixing issue #3)
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@@ -1,12 +1,12 @@
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#%Module1.0
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set whatis "block-structured AMR framework"
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set url "https://ccse.lbl.gov/BoxLib/index.html"
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set license "BSD"
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set licensefile "license.txt"
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set maintainer "Achim Gsell <achim.gsell@psi.ch>"
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module-whatis "block-structured AMR framework"
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module-url "https://ccse.lbl.gov/BoxLib/index.html"
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module-license "BSD"
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module-licensefile "license.txt"
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module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
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set help "
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module-help "
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BoxLib contains all the functionality needed to write a parallel,
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block-structured AMR application. The fundamental parallel abstraction is
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the MultiFab, which holds the data on the union of grids at a level. A
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@@ -32,4 +32,3 @@ of computing with fewer, larger grids in the hybrid OpenMP--MPI approach
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is that the size of the meta-data is substantially reduced.
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"
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source $env(PSI_LIBMODULES)
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+7
-8
@@ -1,14 +1,14 @@
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#%Module1.0
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# OPAL_PREFIX is also used by OpenMPI!
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set dont-setenv { OPAL_PREFIX }
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module-dont-setenv { OPAL_PREFIX }
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set whatis "Object Oriented Particle Accelerator Library"
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set url "http://amas.psi.ch/OPAL"
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set license "PSI"
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set maintainer "Achim Gsell <achim.gsell@psi.ch>"
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module-whatis "Object Oriented Particle Accelerator Library"
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module-url "http://amas.psi.ch/OPAL"
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module-license "PSI"
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module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
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set help "
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module-help "
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OPAL is a C++ framework for general particle accelerator simulations. It
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includes various beam line element descriptions and methods for single
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particle optics, namely maps up to arbitrary order, symplectic integration
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@@ -22,7 +22,6 @@ field. A new iterative solver handles arbitrary complex boundary conditions
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and benefiting from the new geometry class.
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"
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source $env(PSI_LIBMODULES)
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setenv OPAL_EXE_PATH "${PREFIX}/bin"
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set-family OPAL
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module-addgroup OPAL
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@@ -1,12 +1,12 @@
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#%Module1.0
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set whatis "SuperLU_DIST - A library for direct solution of large, sparse, nonsymmetric systems of linear equations."
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set url "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/"
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set license "BSD"
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set licensefile "README"
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set maintainer "Achim Gsell <achim.gsell@psi.ch>"
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module-whatis "A library for direct solution of large, sparse, nonsymmetric systems of linear equations."
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module-url "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/"
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module-license "BSD"
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module-licensefile "README"
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module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
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set help "
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module-help "
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SuperLU is a general purpose library for the direct solution of large,
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sparse, nonsymmetric systems of linear equations on high performance
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machines. The library is written in C and is callable from either C or
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@@ -23,4 +23,3 @@ system, estimate the condition number, calculate the relative backward
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error, and estimate error bounds for the refined solutions.
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"
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source $env(PSI_LIBMODULES)
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@@ -1,12 +1,10 @@
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#%Module1.0
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source $env(PSI_LIBMODULES)
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set whatis "GROMACS is a versatile package to perform molecular dynamics"
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set url "http://www.gromacs.org/"
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set license "See PREFIX/share/doc/COPYING"
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set maintainer "Antonio Benedetto <antonio.benedetto@psi.ch>"
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set help "
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module-whatis "GROMACS is a versatile package to perform molecular dynamics"
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module-url "http://www.gromacs.org/"
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module-license "See PREFIX/share/doc/COPYING"
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module-maintainer "Antonio Benedetto <antonio.benedetto@psi.ch>"
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module-help "
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GROMACS is a versatile package to perform molecular dynamics, i.e. simulate
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the Newtonian equations of motion for systems with hundreds to millions of
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particles.
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@@ -18,4 +16,3 @@ usually dominate simulations) many groups are also using it for research on
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non-biological systems, e.g. polymers.
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"
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set-family MPI
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+6
-8
@@ -1,10 +1,10 @@
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#%Module1.0
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set whatis "Hierachical Data Format 5"
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set url "http://www.hdfgroup.org/HDF5"
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set license "HDF license (BSD-like)"
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set maintainer "Achim Gsell <achim.gsell@psi.ch>"
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set help "
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module-whatis "Hierachical Data Format 5"
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module-url "http://www.hdfgroup.org/HDF5"
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module-license "HDF license (BSD-like)"
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module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
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module-help "
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HDF5 is a data model, library, and file format for storing and managing
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data. It supports an unlimited variety of datatypes, and is designed for
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flexible and efficient I/O and for high volume and complex data. HDF5 is
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@@ -13,7 +13,5 @@ of HDF5. The HDF5 Technology suite includes tools and applications for
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managing, manipulating, viewing, and analyzing data in the HDF5 format.
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"
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source $env(PSI_LIBMODULES)
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conflict hdf5_serial
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set-family HDF5
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module-addgroup HDF5
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+5
-6
@@ -1,11 +1,11 @@
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#%Module1.0
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set whatis "the Independent Parallel Particle Layer"
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set url "http://amas.psi.ch/IPPL"
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set license "PSI"
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set maintainer "Achim Gsell <achim.gsell@psi.ch>"
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module-whatis "the Independent Parallel Particle Layer"
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module-url "http://amas.psi.ch/IPPL"
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module-license "PSI"
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module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
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set help "
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module-help "
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IPPL is an object-oriented framework for particle based applications in
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computational science requiring high-performance parallel computers. It
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is a library of C++ classes designed to represent common abstractions in
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@@ -14,4 +14,3 @@ highest abstraction layer. Codes developed on serial workstations port
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to all supported architectures, including parallel processors.
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"
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source $env(PSI_LIBMODULES)
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@@ -1,11 +1,11 @@
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#%Module1.0
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set whatis "ParMETIS - Parallel Graph Partitioning and Fill-reducing Matrix Ordering"
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set url "http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview"
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set license "See: \$PARMETIS_DIR/share/doc/parmetis/LICENSE.txt"
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set maintainer "Achim Gsell <achim.gsell@psi.ch>"
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module-whatis "ParMETIS - Parallel Graph Partitioning and Fill-reducing Matrix Ordering"
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module-url "http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview"
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module-license "See: \$PARMETIS_DIR/share/doc/parmetis/LICENSE.txt"
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module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
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set help "
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module-help "
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ParMETIS is an MPI-based parallel library that implements a variety of
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algorithms for partitioning unstructured graphs, meshes, and for computing
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fill-reducing orderings of sparse matrices. ParMETIS extends the functioni-
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@@ -16,4 +16,3 @@ k-way graph-partitioning, adaptive repartitioning, and parallel multi-
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constrained partitioning schemes developed in our lab.
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"
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source $env(PSI_LIBMODULES)
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