From 8baf379c9f6a90007415c641001000017eeb0b35 Mon Sep 17 00:00:00 2001
From: Achim Gsell <achim.gsell@psi.ch>
Date: Mon, 12 Jan 2015 18:43:20 +0100
Subject: [PATCH 1/6] scripts/unison.build: added

---
 scripts/unison.build | 29 +++++++++++++++++++++++++++++
 1 file changed, 29 insertions(+)
 create mode 100755 scripts/unison.build

diff --git a/scripts/unison.build b/scripts/unison.build
new file mode 100755
index 0000000..0db233c
--- /dev/null
+++ b/scripts/unison.build
@@ -0,0 +1,29 @@
+#!/bin/bash
+
+source "$(dirname $0)/../lib/libem.bash"
+
+function em.configure() {
+	:
+}
+
+function em.build() {
+	cd "${MODULE_SRCDIR}"
+	make
+}
+
+function em.install() {
+	cd "${MODULE_SRCDIR}"
+	install -m 0755 -d "${PREFIX}/bin"
+	install -m 0755 unison "${PREFIX}/bin"
+}
+
+em.add_to_family 'System'
+em.set_docfiles 'BUGS.txt' 'CONTRIB' 'COPYING' 'NEWS' 'README'
+#em.set_build_dependencies "${COMPILER}"
+em.make_all
+
+# Local Variables:
+# mode: sh
+# sh-basic-offset: 8
+# tab-width: 8
+# End:

From ac1310dda71bc711eebead596bfdb8e1e46427cc Mon Sep 17 00:00:00 2001
From: Achim Gsell <achim.gsell@psi.ch>
Date: Fri, 16 Jan 2015 16:13:33 +0100
Subject: [PATCH 2/6] unison: tar-ball added


From f083ca4194faa73c0eb954f03e9141347b4f7709 Mon Sep 17 00:00:00 2001
From: Achim Gsell <achim.gsell@psi.ch>
Date: Fri, 27 Feb 2015 16:53:07 +0100
Subject: [PATCH 3/6] config/families.d/openmpi-1.8.2: added

---
 config/families.d/openmpi-1.8.2 | 5 +++++
 1 file changed, 5 insertions(+)
 create mode 100644 config/families.d/openmpi-1.8.2

diff --git a/config/families.d/openmpi-1.8.2 b/config/families.d/openmpi-1.8.2
new file mode 100644
index 0000000..d997a66
--- /dev/null
+++ b/config/families.d/openmpi-1.8.2
@@ -0,0 +1,5 @@
+MPI=openmpi
+MPI_VERSION=1.8.2
+
+OPENMPI_VERSION=${MPI_VERSION}
+

From c4003e437d574a41068d6b96b85d1805a85aeb25 Mon Sep 17 00:00:00 2001
From: Achim Gsell <achim.gsell@psi.ch>
Date: Fri, 27 Feb 2015 16:58:43 +0100
Subject: [PATCH 4/6] System/unison/build: file moved

---
 scripts/{unison.build => System/unison/build} | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
 rename scripts/{unison.build => System/unison/build} (90%)

diff --git a/scripts/unison.build b/scripts/System/unison/build
similarity index 90%
rename from scripts/unison.build
rename to scripts/System/unison/build
index 0db233c..715d2be 100755
--- a/scripts/unison.build
+++ b/scripts/System/unison/build
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-source "$(dirname $0)/../lib/libem.bash"
+source "$(dirname $0)/../../../lib/libem.bash"
 
 function em.configure() {
 	:

From 6c8e2c9fa9064e3669ca2735e91ac1a66e12072e Mon Sep 17 00:00:00 2001
From: Achim Gsell <achim.gsell@psi.ch>
Date: Fri, 27 Feb 2015 22:47:20 +0100
Subject: [PATCH 5/6] lib/libem.bash: bugfixes

---
 lib/libem.bash                                               | 4 ++--
 scripts/Bootstrap/{Modules.build => Modules/build}           | 0
 scripts/Bootstrap/{ => Pmodules}/bash                        | 0
 scripts/Bootstrap/{ => Pmodules}/bash_completion             | 0
 scripts/Bootstrap/{ => Pmodules}/dialog.bash                 | 0
 scripts/Bootstrap/{ => Pmodules}/environment.bash            | 0
 scripts/Bootstrap/{ => Pmodules}/init_local_env.bash         | 0
 scripts/Bootstrap/{ => Pmodules}/libmodules.tcl              | 0
 scripts/Bootstrap/{ => Pmodules}/modsync.bash                | 0
 scripts/Bootstrap/{ => Pmodules}/modulecmd.bash              | 0
 scripts/Bootstrap/{ => Pmodules}/profile.bash                | 0
 scripts/Bootstrap/{Tcl.build => Tcl/build}                   | 0
 scripts/Bootstrap/{bash.build => bash/build}                 | 0
 scripts/Bootstrap/{build_pmodules.sh => compile_pmodules.sh} | 0
 scripts/Bootstrap/{dialog.build => dialog/build}             | 0
 scripts/Bootstrap/{getopt.build => getopt/build}             | 0
 scripts/Bootstrap/{gettext.build => gettext/build}           | 0
 17 files changed, 2 insertions(+), 2 deletions(-)
 rename scripts/Bootstrap/{Modules.build => Modules/build} (100%)
 rename scripts/Bootstrap/{ => Pmodules}/bash (100%)
 rename scripts/Bootstrap/{ => Pmodules}/bash_completion (100%)
 rename scripts/Bootstrap/{ => Pmodules}/dialog.bash (100%)
 rename scripts/Bootstrap/{ => Pmodules}/environment.bash (100%)
 rename scripts/Bootstrap/{ => Pmodules}/init_local_env.bash (100%)
 rename scripts/Bootstrap/{ => Pmodules}/libmodules.tcl (100%)
 rename scripts/Bootstrap/{ => Pmodules}/modsync.bash (100%)
 rename scripts/Bootstrap/{ => Pmodules}/modulecmd.bash (100%)
 rename scripts/Bootstrap/{ => Pmodules}/profile.bash (100%)
 rename scripts/Bootstrap/{Tcl.build => Tcl/build} (100%)
 rename scripts/Bootstrap/{bash.build => bash/build} (100%)
 rename scripts/Bootstrap/{build_pmodules.sh => compile_pmodules.sh} (100%)
 rename scripts/Bootstrap/{dialog.build => dialog/build} (100%)
 rename scripts/Bootstrap/{getopt.build => getopt/build} (100%)
 rename scripts/Bootstrap/{gettext.build => gettext/build} (100%)

diff --git a/lib/libem.bash b/lib/libem.bash
index 51e741e..e59b0d0 100644
--- a/lib/libem.bash
+++ b/lib/libem.bash
@@ -195,7 +195,7 @@ function em.add_to_family() {
 	if [[ -z ${1} ]]; then
 		die 42 "${FUNCNAME}: Missing family argument."
 	fi
-	if [[ ! -d ${PSI_PREFIX}/${PSI_MODULES_ROOT}/${1} ]]; then
+	if [[ ! -d ${PSI_PREFIX}/${PSI_TEMPLATES_DIR}/${1} ]]; then
 		die 43 "${1}: family does not exist."
 	fi
 	MODULE_FAMILY=$1
@@ -243,7 +243,7 @@ function _load_build_dependencies() {
 		fi
 		if ! module_is_available "$m"; then
 		        debug "${m}: module not available"
-			local rels=( ${releases//: } )
+			local rels=( ${releases//:/ } )
 			for rel in "${rels[@]}"; do
 				debug "${m}: check release \"${rel}\""
 				eval $("${MODULECMD}" bash use ${rel})
diff --git a/scripts/Bootstrap/Modules.build b/scripts/Bootstrap/Modules/build
similarity index 100%
rename from scripts/Bootstrap/Modules.build
rename to scripts/Bootstrap/Modules/build
diff --git a/scripts/Bootstrap/bash b/scripts/Bootstrap/Pmodules/bash
similarity index 100%
rename from scripts/Bootstrap/bash
rename to scripts/Bootstrap/Pmodules/bash
diff --git a/scripts/Bootstrap/bash_completion b/scripts/Bootstrap/Pmodules/bash_completion
similarity index 100%
rename from scripts/Bootstrap/bash_completion
rename to scripts/Bootstrap/Pmodules/bash_completion
diff --git a/scripts/Bootstrap/dialog.bash b/scripts/Bootstrap/Pmodules/dialog.bash
similarity index 100%
rename from scripts/Bootstrap/dialog.bash
rename to scripts/Bootstrap/Pmodules/dialog.bash
diff --git a/scripts/Bootstrap/environment.bash b/scripts/Bootstrap/Pmodules/environment.bash
similarity index 100%
rename from scripts/Bootstrap/environment.bash
rename to scripts/Bootstrap/Pmodules/environment.bash
diff --git a/scripts/Bootstrap/init_local_env.bash b/scripts/Bootstrap/Pmodules/init_local_env.bash
similarity index 100%
rename from scripts/Bootstrap/init_local_env.bash
rename to scripts/Bootstrap/Pmodules/init_local_env.bash
diff --git a/scripts/Bootstrap/libmodules.tcl b/scripts/Bootstrap/Pmodules/libmodules.tcl
similarity index 100%
rename from scripts/Bootstrap/libmodules.tcl
rename to scripts/Bootstrap/Pmodules/libmodules.tcl
diff --git a/scripts/Bootstrap/modsync.bash b/scripts/Bootstrap/Pmodules/modsync.bash
similarity index 100%
rename from scripts/Bootstrap/modsync.bash
rename to scripts/Bootstrap/Pmodules/modsync.bash
diff --git a/scripts/Bootstrap/modulecmd.bash b/scripts/Bootstrap/Pmodules/modulecmd.bash
similarity index 100%
rename from scripts/Bootstrap/modulecmd.bash
rename to scripts/Bootstrap/Pmodules/modulecmd.bash
diff --git a/scripts/Bootstrap/profile.bash b/scripts/Bootstrap/Pmodules/profile.bash
similarity index 100%
rename from scripts/Bootstrap/profile.bash
rename to scripts/Bootstrap/Pmodules/profile.bash
diff --git a/scripts/Bootstrap/Tcl.build b/scripts/Bootstrap/Tcl/build
similarity index 100%
rename from scripts/Bootstrap/Tcl.build
rename to scripts/Bootstrap/Tcl/build
diff --git a/scripts/Bootstrap/bash.build b/scripts/Bootstrap/bash/build
similarity index 100%
rename from scripts/Bootstrap/bash.build
rename to scripts/Bootstrap/bash/build
diff --git a/scripts/Bootstrap/build_pmodules.sh b/scripts/Bootstrap/compile_pmodules.sh
similarity index 100%
rename from scripts/Bootstrap/build_pmodules.sh
rename to scripts/Bootstrap/compile_pmodules.sh
diff --git a/scripts/Bootstrap/dialog.build b/scripts/Bootstrap/dialog/build
similarity index 100%
rename from scripts/Bootstrap/dialog.build
rename to scripts/Bootstrap/dialog/build
diff --git a/scripts/Bootstrap/getopt.build b/scripts/Bootstrap/getopt/build
similarity index 100%
rename from scripts/Bootstrap/getopt.build
rename to scripts/Bootstrap/getopt/build
diff --git a/scripts/Bootstrap/gettext.build b/scripts/Bootstrap/gettext/build
similarity index 100%
rename from scripts/Bootstrap/gettext.build
rename to scripts/Bootstrap/gettext/build

From 7690327e9e78a8357fa624e3702fa079d6dce267 Mon Sep 17 00:00:00 2001
From: Achim Gsell <achim.gsell@psi.ch>
Date: Fri, 27 Feb 2015 22:49:18 +0100
Subject: [PATCH 6/6] Bootstrap: reorganization, bugfixes

---
 scripts/Bootstrap/Modules/build           |  2 +-
 scripts/Bootstrap/Pmodules/modulecmd.bash | 12 +++++-----
 scripts/Bootstrap/Tcl/build               | 28 ++++++++++++++++++++++-
 scripts/Bootstrap/bash/build              |  2 +-
 scripts/Bootstrap/compile_pmodules.sh     | 12 +++++-----
 scripts/Bootstrap/dialog/build            |  2 +-
 scripts/Bootstrap/getopt/build            |  4 ++--
 scripts/Bootstrap/gettext/build           |  2 +-
 scripts/Bootstrap/install_pmodules.sh     | 19 ++++++++-------
 9 files changed, 54 insertions(+), 29 deletions(-)
 mode change 120000 => 100755 scripts/Bootstrap/Tcl/build

diff --git a/scripts/Bootstrap/Modules/build b/scripts/Bootstrap/Modules/build
index be5e774..115b214 100755
--- a/scripts/Bootstrap/Modules/build
+++ b/scripts/Bootstrap/Modules/build
@@ -1,6 +1,6 @@
 #!/bin/bash
 #set -o functrace
-source "$(dirname $0)/../../lib/libem.bash"
+source "$(dirname $0)/../../../lib/libem.bash"
 
 TCL_DIR="${PSI_PREFIX}/Tools/Pmodules/0.99.0"
 
diff --git a/scripts/Bootstrap/Pmodules/modulecmd.bash b/scripts/Bootstrap/Pmodules/modulecmd.bash
index 3fb4149..6b34ea3 100755
--- a/scripts/Bootstrap/Pmodules/modulecmd.bash
+++ b/scripts/Bootstrap/Pmodules/modulecmd.bash
@@ -569,10 +569,10 @@ subcommand_avail() {
 	local dir=''
 	
 	# get number of columns of terminal
-	eval $(resize)
+	cols=$(tput cols)
 
 	output_header() {
-		let i=($COLUMNS-${#dir})/2-2
+		let i=($cols-${#dir})/2-2
 		printf -- "%0.s-" $(seq 1 $i) 1>&2
 		printf -- " %s " "${dir}" 1>&2
 		printf -- "%0.s-" $(seq 1 $i) 1>&2
@@ -618,7 +618,7 @@ subcommand_avail() {
 	human_readable_output() {
 		output_header
 
-		local -i column=$COLUMNS
+		local -i column=$cols
 		local -i colsize=16
 		for ((i=0; i<${#mods[@]}; i+=2)); do
 			if [[ ${userlvl} == 'novice' ]]; then
@@ -637,11 +637,11 @@ subcommand_avail() {
 			local -i len=${#mod}
 			local -i span=$(( len / 16 + 1 ))
 			local -i colsize=$(( span * 16 ))
-			if (( column+len >= COLUMNS )); then
+			if (( column+len >= cols )); then
 			        printf -- "\n" 1>&2
 				column=0
 			fi
-			if (( column+colsize < COLUMNS )); then
+			if (( column+colsize < cols )); then
 			        fmt="%-${colsize}s"
 			else
 				fmt="%-s"
@@ -680,7 +680,7 @@ compute_family_depth () {
 	{
 		local -r family=$1
 		cd "${modulepath_root}"
-		local -r tmp=$(find "${family}" -d -type f -o -type l | head -1)
+		local -r tmp=$(find "${family}" -depth -type f -o -type l | head -1)
 		local -ar tmp2=( ${tmp//\// } )
 		local depth=${#tmp2[@]}
 		let depth-=3
diff --git a/scripts/Bootstrap/Tcl/build b/scripts/Bootstrap/Tcl/build
deleted file mode 120000
index dfcb532..0000000
--- a/scripts/Bootstrap/Tcl/build
+++ /dev/null
@@ -1 +0,0 @@
-../Programming/Tcl.build
\ No newline at end of file
diff --git a/scripts/Bootstrap/Tcl/build b/scripts/Bootstrap/Tcl/build
new file mode 100755
index 0000000..402004d
--- /dev/null
+++ b/scripts/Bootstrap/Tcl/build
@@ -0,0 +1,27 @@
+#!/bin/bash
+
+source "$(dirname $0)/../../../lib/libem.bash"
+
+function em.configure() {
+	case ${OS} in
+	Linux )
+		srcdir="${MODULE_SRCDIR}/unix"
+		;;
+	Darwin )
+		srcdir="${MODULE_SRCDIR}/macosx"
+		;;
+	esac
+	"${srcdir}"/configure \
+		--prefix="${PREFIX}" \
+		--enable-shared=no \
+		|| exit 1
+}
+
+function em.post_install() {
+	{ cd "${PREFIX}"/bin && rm -f tclsh && ln -fs tclsh${V%.*} tclsh; };
+}
+
+em.add_to_family 'Programming'
+em.set_docfiles 'license.terms' 'README'
+em.set_build_dependencies "${COMPILER}"
+em.make_all
diff --git a/scripts/Bootstrap/bash/build b/scripts/Bootstrap/bash/build
index 122c5f9..19ef03f 100755
--- a/scripts/Bootstrap/bash/build
+++ b/scripts/Bootstrap/bash/build
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-source "$(dirname $0)/../../lib/libem.bash"
+source "$(dirname $0)/../../../lib/libem.bash"
 
 function em.configure() {
 	"${MODULE_SRCDIR}"/configure \
diff --git a/scripts/Bootstrap/compile_pmodules.sh b/scripts/Bootstrap/compile_pmodules.sh
index f36cbfc..2daebfa 100755
--- a/scripts/Bootstrap/compile_pmodules.sh
+++ b/scripts/Bootstrap/compile_pmodules.sh
@@ -8,13 +8,13 @@ source "${BASE_DIR}/config/pmodules_version.conf"
 unset PMODULES_HOME
 source "/opt/psi/config/environment.bash"
 
-${BOOTSTRAP_DIR}/gettext.build --bootstrap
-${BOOTSTRAP_DIR}/getopt.build --bootstrap
-${BOOTSTRAP_DIR}/dialog.build --bootstrap
-${BOOTSTRAP_DIR}/bash.build --bootstrap
-${BOOTSTRAP_DIR}/Tcl.build --bootstrap
+${BOOTSTRAP_DIR}/gettext/build --bootstrap
+${BOOTSTRAP_DIR}/getopt/build --bootstrap
+${BOOTSTRAP_DIR}/dialog/build --bootstrap
+${BOOTSTRAP_DIR}/bash/build --bootstrap
+${BOOTSTRAP_DIR}/Tcl/build --bootstrap
 
 # we have to remove the init directory - otherwise the next build will fail...
 rm -rf "${PMODULES_HOME}/init"
-${BOOTSTRAP_DIR}/Modules.build --bootstrap
+${BOOTSTRAP_DIR}/Modules/build --bootstrap
 mv -v "${PMODULES_HOME}/bin/modulecmd" "${PMODULES_HOME}/bin/modulecmd.tcl"
diff --git a/scripts/Bootstrap/dialog/build b/scripts/Bootstrap/dialog/build
index b5d7a1d..ae80ddd 100755
--- a/scripts/Bootstrap/dialog/build
+++ b/scripts/Bootstrap/dialog/build
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-source "$(dirname $0)/../../lib/libem.bash"
+source "$(dirname $0)/../../../lib/libem.bash"
 
 function em.configure() {
 	"${MODULE_SRCDIR}"/configure \
diff --git a/scripts/Bootstrap/getopt/build b/scripts/Bootstrap/getopt/build
index e502f0e..e910f51 100755
--- a/scripts/Bootstrap/getopt/build
+++ b/scripts/Bootstrap/getopt/build
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-source "$(dirname $0)/../../lib/libem.bash"
+source "$(dirname $0)/../../../lib/libem.bash"
 
 function em.configure() {
 	:
@@ -9,7 +9,7 @@ function em.configure() {
 function em.build() {
 	case ${OS} in
 		Linux )
-			declare -x LDFLAGS="-lintl -liconv"
+			declare -x LDFLAGS="-lintl"
 			;;
 		Darwin )
 			declare -x LDFLAGS="-lintl -liconv -framework CoreFoundation"
diff --git a/scripts/Bootstrap/gettext/build b/scripts/Bootstrap/gettext/build
index 56463f6..68d8744 100755
--- a/scripts/Bootstrap/gettext/build
+++ b/scripts/Bootstrap/gettext/build
@@ -1,6 +1,6 @@
 #!/bin/bash
 
-source "$(dirname $0)/../../lib/libem.bash"
+source "$(dirname $0)/../../../lib/libem.bash"
 
 function em.configure() {
     "${MODULE_SRCDIR}"/configure \
diff --git a/scripts/Bootstrap/install_pmodules.sh b/scripts/Bootstrap/install_pmodules.sh
index 7673c49..b540c0e 100755
--- a/scripts/Bootstrap/install_pmodules.sh
+++ b/scripts/Bootstrap/install_pmodules.sh
@@ -2,6 +2,7 @@
 
 declare -r BASE_DIR=$(cd "$(dirname $0)/../.." && pwd)
 declare -r BOOTSTRAP_DIR="${BASE_DIR}/scripts/Bootstrap"
+declare -r SRC_DIR="${BOOTSTRAP_DIR}/Pmodules"
 
 source "${BASE_DIR}/config/pmodules_version.conf"
 
@@ -11,21 +12,19 @@ source "/opt/psi/config/environment.bash"
 sed_cmd="s:@PMODULES_HOME@:${PMODULES_HOME}:g;"
 sed_cmd+="s:@PMODULES_VERSION@:${PMODULES_VERSION}:g;"
 sed_cmd+="s:@MODULES_VERSION@:${MODULES_VERSION}:g"
-sed "${sed_cmd}" "${BOOTSTRAP_DIR}/modulecmd.bash" > "${BOOTSTRAP_DIR}/modulecmd"
+sed "${sed_cmd}" "${SRC_DIR}/modulecmd.bash" > "${SRC_DIR}/modulecmd"
 
 install -d -m 0755 "${PMODULES_HOME}/bin"
 install -d -m 0755 "${PMODULES_HOME}/config"
 install -d -m 0755 "${PMODULES_HOME}/init"
 install -d -m 0755 "${PMODULES_HOME}/lib"
 
-install -m 0755 "${BOOTSTRAP_DIR}/modulecmd" "${PMODULES_HOME}/bin"
-install -m 0755 "${BOOTSTRAP_DIR}/init_local_env.bash" "${PMODULES_HOME}/bin"
-install -m 0755 "${BOOTSTRAP_DIR}/modsync.bash" "${PMODULES_HOME}/bin"
-install -m 0755 "${BOOTSTRAP_DIR}/dialog.bash" "${PMODULES_HOME}/bin"
+install -m 0755 "${SRC_DIR}/modulecmd" "${PMODULES_HOME}/bin"
+install -m 0755 "${SRC_DIR}/init_local_env.bash" "${PMODULES_HOME}/bin"
+install -m 0755 "${SRC_DIR}/modsync.bash" "${PMODULES_HOME}/bin"
+install -m 0755 "${SRC_DIR}/dialog.bash" "${PMODULES_HOME}/bin"
 
-#install -m 0644 "${BOOTSTRAP_DIR}/modulerc" "${PMODULES_HOME}/config"
+install -m 0644 "${SRC_DIR}/bash" "${PMODULES_HOME}/init"
+install -m 0644 "${SRC_DIR}/bash_completion" "${PMODULES_HOME}/init"
 
-install -m 0644 "${BOOTSTRAP_DIR}/bash" "${PMODULES_HOME}/init"
-install -m 0644 "${BOOTSTRAP_DIR}/bash_completion" "${PMODULES_HOME}/init"
-
-install -m 0644 "${BOOTSTRAP_DIR}/libmodules.tcl" "${PMODULES_HOME}/lib"
+install -m 0644 "${SRC_DIR}/libmodules.tcl" "${PMODULES_HOME}/lib"