Sync new-module skill with current practice; README agent caveats

Skill (local + repo copy): --tmpdir/--distdir now part of the standard
recipe (never write big files to /var/tmp — small and shared on the
login node), env-contamination and slow-shared-storage guardrails
added, ccp4 archetype 5b updated to the wget --continue + gzip -t prep
that is actually in ccp4/build.

Main README: agent section notes the skill can be buggy (use with
caution, corrections welcome, reading along is a good way to learn) and
that new software or a new download site needs the vendor install page
given as context; /var/tmp warning made explicit here and in
ccp4/README.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
This commit is contained in:
2026-08-18 22:29:13 +02:00
co-authored by Claude Fable 5
parent c3c38856b3
commit 1c8a83aa94
4 changed files with 74 additions and 44 deletions
+3 -3
View File
@@ -18,9 +18,9 @@ macromolecular crystallography. https://www.ccp4.ac.uk/
## Build on Ra
Build tmp and download cache MUST be on /das, not the defaults
(/var/tmp is too small, the tarball alone blows the $HOME quotaa
download dying with "Failure writing output to destination" means
exactly that). Pass both dirs explicitly on the command line so there
(/var/tmp is small and **shared with everyone on the login nodedo
not fill it**; the tarball alone blows the $HOME quota — a download
dying with "Failure writing output to destination" means exactly that). Pass both dirs explicitly on the command line so there
is no doubt where things land — **adapt the p-group path
(`p21/p21515`) to your own**: