From 221f141241ae8f4592a4558adc1516daba8eabcd Mon Sep 17 00:00:00 2001 From: Spencer Bliven Date: Fri, 5 Mar 2021 15:17:44 +0100 Subject: [PATCH] Relion 3.1.2 and 3.1.1-1 3.1.1-1 is compiled against cuda-aware openmpi/4.0.5_slurm (CUDA 11.0.3), which fixes some bugs --- EM/relion/README.md | 2 ++ EM/relion/files/variants | 4 +++- 2 files changed, 5 insertions(+), 1 deletion(-) diff --git a/EM/relion/README.md b/EM/relion/README.md index 33c92ee..259faaa 100644 --- a/EM/relion/README.md +++ b/EM/relion/README.md @@ -9,3 +9,5 @@ admin account. Currently only gcc/7.4.0 is used. Better performance is reported with intel icc and MKL, but this would require additional openmpi variants. +After running ./build, install relion scripts from the repository at +https://git.psi.ch/lsm-hpce/relion-scripts diff --git a/EM/relion/files/variants b/EM/relion/files/variants index d8c4123..6f2db52 100644 --- a/EM/relion/files/variants +++ b/EM/relion/files/variants @@ -6,4 +6,6 @@ relion/3.0.8-1 stable gcc/9.3.0 openmpi/4.0.5_slurm cuda/11.0.3 b:cmake/3.15.5 b relion/3.1-beta deprecated gcc/7.4.0 openmpi/3.1.4_merlin6 cuda/9.2.148 b:cmake/3.14.0 b:tiff/4.0.9 relion/3.1.0 deprecated gcc/7.5.0 openmpi/4.0.4_slurm cuda/10.0.130 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0 relion/3.1.0-1 stable gcc/7.5.0 openmpi/4.0.4_slurm cuda/10.1.105 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0 -relion/3.1.1 stable gcc/9.3.0 openmpi/4.0.4_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0 +relion/3.1.1 deprecated gcc/9.3.0 openmpi/4.0.4_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0 +relion/3.1.1-1 stable gcc/9.2.0 openmpi/4.0.5_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0 +relion/3.1.2 stable gcc/9.2.0 openmpi/4.0.5_slurm cuda/11.0.3 b:cmake/3.15.5 b:tiff/4.0.9 b:git/2.22.0