59 lines
1.8 KiB
C++
59 lines
1.8 KiB
C++
// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
|
|
// SPDX-License-Identifier: GPL-3.0-only
|
|
|
|
#ifndef JUNGFRAUJOCH_HDF5DATAFILEPLUGINMX_H
|
|
#define JUNGFRAUJOCH_HDF5DATAFILEPLUGINMX_H
|
|
|
|
#include "HDF5DataFilePlugin.h"
|
|
#include "../common/AutoIncrVector.h"
|
|
|
|
class HDF5DataFilePluginMX : public HDF5DataFilePlugin {
|
|
const size_t max_spots;
|
|
|
|
// spots
|
|
std::vector<float> spot_x;
|
|
std::vector<float> spot_y;
|
|
std::vector<float> spot_int;
|
|
std::vector<int8_t> spot_indexed;
|
|
std::vector<int8_t> spot_ice_ring;
|
|
std::vector<int32_t> spot_h;
|
|
std::vector<int32_t> spot_k;
|
|
std::vector<int32_t> spot_l;
|
|
std::vector<float> spot_dist_ewald;
|
|
|
|
AutoIncrVector<float> beam_corr_x;
|
|
AutoIncrVector<float> beam_corr_y;
|
|
|
|
AutoIncrVector<uint32_t> npeaks;
|
|
AutoIncrVector<uint32_t> strong_pixel_count;
|
|
|
|
AutoIncrVector<uint32_t> spot_count_total;
|
|
AutoIncrVector<uint32_t> spot_count_ice;
|
|
AutoIncrVector<uint32_t> spot_count_indexed;
|
|
AutoIncrVector<uint32_t> spot_count_low_res;
|
|
|
|
// indexing
|
|
AutoIncrVector<uint8_t> indexed;
|
|
std::vector<float> indexed_lattice;
|
|
|
|
// crystal
|
|
AutoIncrVector<float> profile_radius;
|
|
AutoIncrVector<float> b_factor;
|
|
|
|
// bkg_estimate
|
|
AutoIncrVector<float> bkg_estimate;
|
|
|
|
// resolution_estimation
|
|
AutoIncrVector<float> resolution_estimate;
|
|
|
|
AutoIncrVector<uint32_t> niggli_class;
|
|
AutoIncrVector<std::string> bravais_lattice;
|
|
public:
|
|
explicit HDF5DataFilePluginMX(const StartMessage& msg);
|
|
void OpenFile(HDF5File &data_file, const DataMessage& msg) override;
|
|
void Write(const DataMessage& msg, uint64_t image_number) override;
|
|
void WriteFinal(HDF5File &data_file) override;
|
|
};
|
|
|
|
#endif //JUNGFRAUJOCH_HDF5DATAFILEPLUGINMX_H
|