A TimingMark (common/Logger.h) logs "TIMING <section> <seconds>" at debug level when a section
ends, so the lines go to <prefix>_log.txt and stay off the terminal. Marked: each pass of
RunPipeline (pre-pass, probe, output) and its first-pass indexing, image pass, scale/merge/symmetry
phase, output files and census wait; inside the scale/merge phase every merge (labelled by its
role: P1, P1 space-group search, P1 all observations, the adopted group, P1 cross-check, quality
guard), the post-refinement, the space-group search and its two SearchSpaceGroup arms, adoption,
analyses, the P1 cross-check wait, model validation and writing; inside RotationScaleMerge the
ingest and, per arm, partial scaling, combine and fulls scaling, correction surfaces and the merge;
the console's steps; and the results report. tools/rugnux_timing.py tabulates the tail of a log.
Only the log changes: the outputs are byte-identical.
Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01SVmAWnzCmRKAXVUCdc4iNi
leonarski_fandClaude Opus 5.5
5421c569ed