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Jungfraujoch/receiver/JFJochReceiver.h
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leonarski_f 8261b7354e
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v1.0.0-rc.176 (#86)
* jfjoch_broker: Optional live Rugnux analysis of DECTRIS rotation collections inside the broker, with merged data, maps and the placed model written beside the master file, the rotation lattice in the scan result, and a "Rugnux live" tab and dashboard row in the web frontend.
* Rugnux: Faster processing, with molecular replacement and model validation spread over several GPUs and run on the Apple GPU on macOS.
* Rugnux: The polarization stated in miniCBF and d*TREK headers is used, twinned crystals' space groups are decided more reliably, and a run that finds no lattice still reports every image.

Reviewed-on: #86
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
2026-10-19 07:03:28 +02:00

130 lines
4.3 KiB
C++

// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#pragma once
#include <mutex>
#include <atomic>
#include <chrono>
#include "../common/DiffractionExperiment.h"
#include "../image_analysis/spot_finding/SpotFindingSettings.h"
#include "JFJochReceiverOutput.h"
#include "../image_puller/ZMQImagePuller.h"
#include "../common/ImageBuffer.h"
#include "../image_pusher/ImagePusher.h"
#include "../preview/ZMQPreviewSocket.h"
#include "../preview/ZMQMetadataSocket.h"
#include "../preview/PreviewImage.h"
#include "../common/JFJochReceiverPlots.h"
#include "LossyFilter.h"
#include "../common/MovingAverage.h"
#include "../common/ScanResultGenerator.h"
#include "../image_analysis/indexing/IndexerThreadPool.h"
#include "../image_analysis/IndexAndRefine.h"
class JFJochReceiver {
protected:
Logger &logger;
DiffractionExperiment experiment;
SpotFindingSettings spot_finding_settings;
std::mutex spot_finding_settings_mutex;
SpotFindingSettings GetSpotFindingSettings();
std::atomic<bool> writer_queue_full{false};
std::atomic<bool> cancelled{false};
bool push_images_to_writer;
std::atomic<size_t> compressed_size{0};
std::atomic<uint64_t> uncompressed_size{0};
std::atomic<size_t> images_sent{0};
std::atomic<size_t> images_collected{0};
std::atomic<size_t> images_skipped{0};
std::chrono::time_point<std::chrono::system_clock> start_time;
std::chrono::time_point<std::chrono::system_clock> end_time;
// After END, how long the image pusher may take to return every image buffer it still holds
constexpr static auto SendFinalizeTimeout = std::chrono::seconds(30);
int64_t max_image_number_sent = 0;
std::mutex max_image_number_sent_mutex;
void UpdateMaxImageSent(int64_t image_number);
int64_t max_image_number_received = 0;
std::mutex max_image_number_received_mutex;
void UpdateMaxImageReceived(int64_t image_number);
ImageBuffer &image_buffer;
ImagePusher &image_pusher;
ZMQPreviewSocket *zmq_preview_socket;
ZMQMetadataSocket *zmq_metadata_socket;
JFJochReceiverCurrentStatus &current_status;
JFJochReceiverPlots &plots;
ScanResultGenerator scan_result;
LossyFilter serialmx_filter;
MovingAverage saturated_pixels{1000};
MovingAverage error_pixels{1000};
MovingAverage roi_beam_npixel{1000};
MovingAverage roi_beam_sum{1000};
std::optional<int64_t> images_written;
std::vector<std::unique_ptr<ADUHistogram>> adu_histogram_module;
PixelMask pixel_mask;
std::unique_ptr<AzimuthalIntegrationMapping> az_int_mapping;
std::optional<uint64_t> max_delay;
std::mutex max_delay_mutex;
IndexAndRefine indexer;
std::optional<CrystalLattice> rotation_indexing_lattice;
std::optional<LatticeMessage> rotation_indexing_lattice_type;
std::string writer_error;
void UpdateMaxDelay(uint64_t delay);
JFJochReceiverStatus GetStatus() const;
void SendStartMessage();
void SendEndMessage();
void SaveStartMessageToImageBuffer(const StartMessage &msg);
// The last word on the end message before it is sent: a receiver whose analysis is not the
// per-image one fills in what it found.
virtual void AddToEndMessage(EndMessage &message) {}
virtual void Cancel(const JFJochException &e);
public:
JFJochReceiver(const DiffractionExperiment& experiment,
ImageBuffer &image_buffer,
ImagePusher &image_pusher,
JFJochReceiverCurrentStatus &current_status,
JFJochReceiverPlots &plots,
const SpotFindingSettings &spot_finding_settings,
Logger &logger,
const PixelMask &pixel_mask,
ZMQPreviewSocket *zmq_preview_socket = nullptr,
ZMQMetadataSocket *zmq_metadata_socket = nullptr,
IndexerThreadPool *indexing_thread_pool = nullptr);
virtual ~JFJochReceiver();
virtual void StopReceiver() = 0;
virtual float GetEfficiency() const = 0;
virtual void Cancel(bool silent);
virtual float GetProgress() const = 0;
virtual void SetSpotFindingSettings(const SpotFindingSettings &spot_finding_settings) = 0;
virtual JFJochReceiverOutput GetFinalStatistics() const;
};