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Jungfraujoch/tools/XdsIntegrateParser.h

53 lines
1.4 KiB
C++

// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#pragma once
#include <algorithm>
#include <string>
#include <vector>
#include <unordered_map>
#include <cstdint>
#include "../common/CrystalLattice.h"
struct CcHalfByResolutionResult {
std::vector<double> cc;
std::vector<int32_t> pairs;
std::vector<float> shell_mean_one_over_d2;
};
inline uint64_t hkl_key_16(int64_t h, int64_t k, int64_t l) {
const uint16_t bias = 512; // maps -512..512 -> 0..1024
uint64_t uh = static_cast<uint16_t>(std::clamp(h + bias, int64_t(0), int64_t(1024)));
uint64_t uk = static_cast<uint16_t>(std::clamp(k + bias, int64_t(0), int64_t(1024)));
uint64_t ul = static_cast<uint16_t>(std::clamp(l + bias, int64_t(0), int64_t(1024)));
return uh | (uk << 16) | (ul << 32);
}
struct HKLData {
int64_t h ,k,l;
double I = 0.0;
double sigma = 0.0;
int32_t last_image = 0;
int32_t count = 0;
float rlp = 0.0;
float image_number = -100;
std::vector<double> tail; // any remaining numeric columns
};
using IntegrateMap = std::unordered_map<uint64_t, std::vector<HKLData>>;
IntegrateMap ParseXdsIntegrateHkl(const std::string& filename);
CcHalfByResolutionResult ComputeCcByResolution(
const CrystalLattice& lattice,
const IntegrateMap& ours,
const IntegrateMap& xds,
float d_min,
float d_max,
int32_t nshells);