leonarski_fandClaude Opus 4.8
0c1babd0ca
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Revert Eigen from the FetchContent OVERRIDE_FIND_PACKAGE vendoring (cd394c52,d4d2d0d8) back to an external find_package(Eigen3) dependency, like zlib. The OVERRIDE_FIND_PACKAGE mechanism makes the Visual-Studio-bundled CMake (4.x "-msvc") intermittently segfault during configure -- ~1/3 of fresh configures, and 100% with Ceres CUDA enabled. The fault is in CMake's own FetchContent variable-stack cleanup, reached when Ceres' find_package(Eigen3) resolves the override through a nested FetchContent_MakeAvailable. Stock Kitware CMake runs the identical scripts fine, so it is a bug in the VS-bundled cmake binary; providing Eigen externally avoids that path entirely and is stable with Ceres CUDA both on and off (verified 0 crashes; full CUDA build + NSIS installer succeed under the VS-bundled cmake). Also fix CPACK_NSIS_INSTALLED_ICON_NAME: the backslash value was written verbatim into CPackConfig.cmake, where "\j" is an invalid escape that cmake 4.x (CMP0010 strict) rejects when cpack re-parses it, so cpack failed under the VS-bundled cmake (older/Kitware cpack only warned). Use a forward slash. - image_analysis: keep Ceres USE_CUDA OFF (Jungfraujoch does not use Ceres' GPU solvers) but drop the now-obsolete "required to avoid the Windows cmake crash" rationale from the comment. - docs: Eigen is a required external dependency again (SOFTWARE.md); the Windows viewer build provides zlib + Eigen externally (JFJOCH_VIEWER.md). - THIRD_PARTY_NOTICES: move Eigen from the fetched-and-linked table to the external runtime-libraries table. Docker images still need Eigen re-added (5.0.1, source build) -- to follow. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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Third-party software notices
Jungfraujoch is licensed under GPL-3.0 (see LICENSE); the FPGA design is
licensed under CERN-OHL-S-2.0 (see fpga/LICENSE). It builds on a number of
third-party components, acknowledged below as required by their licenses.
This file is the human-readable manifest. The verbatim license texts live in the
licenses/ directory (regenerate with bash licenses/COLLECT.sh). The frontend's
bundled JavaScript dependencies are listed separately in
frontend/dist/THIRD_PARTY_LICENSES.txt, generated at build time (npm run licenses).
All licenses below are GPL-3.0-compatible.
Fetched at build time and statically linked into the C++ binaries
These are downloaded by CMake (FetchContent / ExternalProject) during the first configure and
linked into the Jungfraujoch executables.
| Component | Version | Copyright | License (SPDX) | License text |
|---|---|---|---|---|
| spdlog | 1.17.0 | Gabi Melman | MIT | spdlog.txt |
| Zstandard | (pinned) | Meta Platforms, Inc. | BSD-3-Clause | zstd.txt |
| HDF5 | 2.1.0 | The HDF Group; UIUC | BSD-3-Clause-style | hdf5.txt |
| slsDetectorPackage | 8.0.2 / 9.2.0 | PSI | LGPL-3.0-or-later | LGPL, GPL |
| cpp-httplib | 0.39.0 | Yuji Hirose | MIT | cpp-httplib.txt |
| libzmq (ZeroMQ) | 4.3.5 | iMatix and contributors | MPL-2.0 | libzmq.txt |
| libtiff | 4.7.1 | Sam Leffler; SGI | libtiff (BSD-like) | libtiff.txt |
| FFTW | 3.3.10 | Matteo Frigo; MIT | GPL-2.0-or-later | fftw.txt |
| Ceres Solver | (pinned) | Google Inc. and contributors | BSD-3-Clause | ceres-solver.txt |
| fast-feedback-indexer | (pinned) | PSI | BSD-3-Clause | fast-feedback-indexer.txt |
| libjpeg-turbo | (pinned) | D. R. Commander and others; IJG | IJG + BSD-3-Clause + Zlib | libjpeg-turbo.txt |
| Catch2 | 3.13.0 | Catch2 Authors | BSL-1.0 | catch2.txt |
Catch2 is used only to build the test binary (jfjoch_test) and is not part of any shipped
artifact; it is listed here for completeness.
Vendored directly in the repository
These are copied into the source tree (see the path) rather than fetched.
| Component | Path | Copyright | License (SPDX) | License text |
|---|---|---|---|---|
| nlohmann/json | include/nlohmann/ |
Niels Lohmann | MIT | nlohmann-json.txt |
| Macaron Base64 | include/base64/ |
tomykaira | MIT | base64-macaron.txt |
| TinyCBOR | frame_serialize/tinycbor/ |
Intel Corporation | MIT | tinycbor.txt |
| Bitshuffle | compression/bitshuffle/ |
Kiyoshi Masui | MIT | bitshuffle.txt |
| Bitshuffle (h-perf) | compression/bitshuffle_hperf/ |
Kal Cutter (DECTRIS) | Apache-2.0 | bitshuffle-hperf.txt |
| LZ4 | compression/lz4/ |
Yann Collet | BSD-2-Clause | lz4.txt |
| HLS arbitrary-precision types | fpga/include/ |
Xilinx, Inc. | Apache-2.0 | xilinx-hls-headers.txt |
| GEMMI | gemmi_gph/ |
Global Phasing Ltd. | MPL-2.0 | gemmi.txt |
| xbflash.qspi | tools/xbflash.qspi/ |
Xilinx / AMD | Apache-2.0 | xbflash-qspi.txt |
| wingetopt | tools/wingetopt/ |
Todd C. Miller; The NetBSD Foundation | ISC AND BSD-2-Clause | wingetopt.txt |
Runtime libraries and SDKs (shipped in binaries, not in the source tree)
| Component | Used by | License | Notice |
|---|---|---|---|
| Qt 6 | jfjoch_viewer |
LGPL-3.0 | notice, LGPL-3.0 |
| NVIDIA CUDA Toolkit (cudart, cuFFT) | CUDA builds | NVIDIA CUDA EULA | notice, EULA |
| zlib | everywhere (compression) | Zlib | zlib.txt |
| Eigen | analysis libs, Ceres, ffbidx (header-only) | MPL-2.0 (+ BSD parts) | eigen.txt, README |
Frontend (npm) dependencies
The React/TypeScript frontend (frontend/) bundles a large transitive tree of npm packages,
overwhelmingly MIT/ISC/BSD/Apache-2.0 licensed. Their full notices are generated automatically:
cd frontend && npm run licenses # writes dist/THIRD_PARTY_LICENSES.txt
The generated file is produced as part of the frontend build target and installed alongside the
served frontend, so the shipped web UI carries its own attribution.
Notes on weak-copyleft and attribution-sensitive components
- MPL-2.0 (Eigen, GEMMI, libzmq): file-level copyleft. GEMMI is vendored in
gemmi_gph/in trimmed form; libzmq is fetched at build time; Eigen is provided externally (header-only). The corresponding source is available from each project upstream. - FFTW is GPL-2.0-or-later — compatible with, and absorbed by, this project's GPL-3.0 license.
- Apache-2.0 components: where upstream ships a
NOTICEfile, it is reproduced in the correspondinglicenses/text. - Qt (LGPL-3.0) and NVIDIA CUDA (EULA) carry redistribution conditions beyond a copyright
notice; see their dedicated notice files. The verbatim LGPL-3.0 and CUDA EULA texts are bundled
(
licenses/Qt6-LGPL-3.0.txt,licenses/NVIDIA-CUDA-EULA.txt); the CUDA EULA is the one shipped with CUDA Toolkit 12.8 — replace it if you build against a different toolkit version.