671 lines
27 KiB
C++
671 lines
27 KiB
C++
// Copyright (2019-2024) Paul Scherrer Institute
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#include "JFJochReceiver.h"
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#include <thread>
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#include "../jungfrau/JFPedestalCalc.h"
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#include "../image_analysis/MXAnalyzer.h"
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#include "../common/DiffractionGeometry.h"
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#include "ImageMetadata.h"
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#include "../common/time_utc.h"
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#include "../common/PixelMask.h"
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#include "../common/CUDAWrapper.h"
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JFJochReceiver::JFJochReceiver(const DiffractionExperiment& in_experiment,
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const PixelMask &pixel_mask,
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const JFCalibration *in_calibration,
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AcquisitionDeviceGroup &in_aq_device,
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ImagePusher &in_image_sender,
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Logger &in_logger, int64_t in_forward_and_sum_nthreads,
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const NUMAHWPolicy &in_numa_policy,
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const SpotFindingSettings &in_spot_finding_settings,
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PreviewImage &in_preview_image,
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PreviewImage &in_preview_image_indexed,
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JFJochReceiverCurrentStatus &in_current_status,
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JFJochReceiverPlots &in_plots,
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SendBuffer &buf,
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ZMQPreviewSocket *in_zmq_preview_socket) :
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experiment(in_experiment),
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calibration(nullptr),
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send_buf_ctrl(experiment, buf),
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acquisition_device(in_aq_device),
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logger(in_logger),
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image_pusher(in_image_sender),
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pedestal_nthreads((experiment.GetStorageCellNumber() > 2) ? 1 : 4),
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frame_transformation_nthreads(in_forward_and_sum_nthreads),
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ndatastreams(experiment.GetDataStreamsNum()),
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data_acquisition_ready(ndatastreams),
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frame_transformation_ready((experiment.GetImageNum() > 0) ? frame_transformation_nthreads : 0),
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numa_policy(in_numa_policy),
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adu_histogram_module(experiment.GetModulesNum()),
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az_int_mapping(experiment),
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spot_finding_settings(in_spot_finding_settings),
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preview_image(in_preview_image),
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preview_image_indexed(in_preview_image_indexed),
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current_status(in_current_status),
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plots(in_plots),
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serialmx_filter(experiment),
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user_mask_raw_coord(pixel_mask.GetUserMask(experiment, false)),
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zmq_preview_socket(in_zmq_preview_socket)
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{
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current_status.SetProgress(0);
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current_status.SetStatus(GetStatus());
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current_status.SetEfficiency({});
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plots.Setup(experiment, az_int_mapping);
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if (experiment.GetDetectorSetup().GetDetectorType() == DetectorType::JUNGFRAU)
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calibration = in_calibration;
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push_images_to_writer = (experiment.GetImageNum() > 0) && (!experiment.GetFilePrefix().empty());
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if (acquisition_device.size() < ndatastreams)
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throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
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"Number of acquisition devices has to match data streams");
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if (frame_transformation_nthreads <= 0)
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throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
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"Number of threads must be more than zero");
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logger.Info("NUMA policy: {}", numa_policy.GetName());
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#ifdef JFJOCH_USE_CUDA
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if (get_gpu_count() == 0)
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logger.Warning("GPU absent, indexing is not possible");
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#endif
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for (int d = 0; d < ndatastreams; d++) {
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acquisition_device[d].PrepareAction(experiment);
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acquisition_device[d].SetSpotFinderParameters(spot_finding_settings);
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logger.Debug("Acquisition device {} prepared", d);
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}
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logger.Info("Data acquisition devices ready");
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if ((experiment.GetDetectorMode() == DetectorMode::PedestalG0)
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|| (experiment.GetDetectorMode() == DetectorMode::PedestalG1)
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|| (experiment.GetDetectorMode() == DetectorMode::PedestalG2)) {
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if (experiment.GetImageNum() > 0) {
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throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
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"Saving and calculating pedestal is not supported for the time being");
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}
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switch (experiment.GetDetectorMode()) {
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case DetectorMode::PedestalG1:
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only_2nd_sc_pedestal = !experiment.IsFixedGainG1() && (experiment.GetStorageCellNumber() == 2);
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break;
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case DetectorMode::PedestalG2:
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only_2nd_sc_pedestal = (experiment.GetStorageCellNumber() == 2);
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break;
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default:
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only_2nd_sc_pedestal = false;
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break;
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}
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int64_t pedestal_count = (only_2nd_sc_pedestal) ? experiment.GetModulesNum()
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: experiment.GetModulesNum() * experiment.GetStorageCellNumber();
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for (int i = 0; i < pedestal_count; i++)
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pedestal.emplace_back(std::make_unique<JFPedestalCalc>(experiment));
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for (int s = 0; s < experiment.GetStorageCellNumber(); s++) {
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bool ignore = only_2nd_sc_pedestal && (s == 0);
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for (int d = 0; d < ndatastreams; d++)
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for (int m = 0; m < experiment.GetModulesNum(d); m++)
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for (int n = 0; n < pedestal_nthreads; n++)
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frame_transformation_futures.emplace_back(std::async(std::launch::async,
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&JFJochReceiver::MeasurePedestalThread,
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this, d, m, s, n, ignore));
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}
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logger.Info("Pedestal threads ready ({} threads/module*SC)", pedestal_nthreads);
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} else if (experiment.GetImageNum() > 0) {
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SendStartMessage(pixel_mask);
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SendCalibration();
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for (int i = 0; i < experiment.GetImageNum(); i++)
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images_to_go.Put(i);
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// Setup frames summation and forwarding
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for (uint32_t i = 0; i < frame_transformation_nthreads; i++) {
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auto handle = std::async(std::launch::async, &JFJochReceiver::FrameTransformationThread,
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this, i);
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frame_transformation_futures.emplace_back(std::move(handle));
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}
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logger.Info("Image compression/forwarding threads started");
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frame_transformation_ready.wait();
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logger.Info("Image compression/forwarding threads ready");
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}
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for (int d = 0; d < ndatastreams; d++)
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data_acquisition_futures.emplace_back(std::async(std::launch::async, &JFJochReceiver::AcquireThread,
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this, d));
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data_acquisition_ready.wait();
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start_time = std::chrono::system_clock::now();
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measurement = std::async(std::launch::async, &JFJochReceiver::FinalizeMeasurement, this);
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logger.Info("Receiving data started");
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}
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void JFJochReceiver::SendStartMessage(const PixelMask &pixel_mask) {
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if (!push_images_to_writer)
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return;
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StartMessage message{};
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experiment.FillMessage(message);
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message.arm_date = time_UTC(std::chrono::system_clock::now());
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message.az_int_bin_number = az_int_mapping.GetBinNumber();
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message.az_int_bin_to_q = az_int_mapping.GetBinToQ();
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message.writer_notification_zmq_addr = image_pusher.GetWriterNotificationSocketAddress();
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std::vector<uint32_t> nexus_mask;
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nexus_mask = pixel_mask.GetMask(experiment);
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size_t xpixel = experiment.GetXPixelsNum();
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size_t ypixel = experiment.GetYPixelsNum();
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CompressedImage image{
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.data = (uint8_t *) nexus_mask.data(),
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.size = nexus_mask.size() * sizeof(nexus_mask[0]),
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.xpixel = xpixel,
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.ypixel = ypixel,
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.pixel_depth_bytes = sizeof(nexus_mask[0]),
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.pixel_is_signed = false,
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.pixel_is_float = false,
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.algorithm = CompressionAlgorithm::NO_COMPRESSION,
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.channel = "default"
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};
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message.AddPixelMask(image);
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image_pusher.StartDataCollection(message);
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}
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void JFJochReceiver::SendPedestal(const std::string &prefix, const std::vector<uint8_t> &v, int gain, int sc) {
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size_t xpixel = RAW_MODULE_COLS;
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size_t ypixel = experiment.GetModulesNum() * RAW_MODULE_LINES;
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std::string channel;
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if (experiment.GetStorageCellNumber() > 1)
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channel = fmt::format("{:s}_g{:d}_sc{:d}", prefix, gain, sc);
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else
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channel = fmt::format("{:s}_g{:d}", prefix, gain);
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CompressedImage image{
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.data = v.data(),
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.size = v.size(),
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.xpixel = (size_t) xpixel,
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.ypixel = (size_t) ypixel,
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.pixel_depth_bytes = 2,
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.pixel_is_signed = false,
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.pixel_is_float = false,
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.algorithm = CompressionAlgorithm::BSHUF_LZ4,
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.channel = channel
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};
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image_pusher.SendCalibration(image);
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}
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void JFJochReceiver::SendCalibration() {
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if ((calibration == nullptr) || !experiment.GetSaveCalibration() || !push_images_to_writer)
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return;
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JFJochBitShuffleCompressor compressor(CompressionAlgorithm::BSHUF_LZ4);
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for (int sc = 0; sc < experiment.GetStorageCellNumber(); sc++) {
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for (int gain = 0; gain < 3; gain++) {
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if (experiment.IsFixedGainG1() && (gain != 1))
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continue;
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SendPedestal("pedestal", compressor.Compress(calibration->GetPedestal(gain, sc)), gain, sc);
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SendPedestal("pedestal_rms", compressor.Compress(calibration->GetPedestalRMS(gain, sc)), gain, sc);
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}
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}
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}
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void JFJochReceiver::AcquireThread(uint16_t data_stream) {
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try {
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NUMAHWPolicy::RunOnNode(acquisition_device[data_stream].GetNUMANode());
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} catch (const JFJochException &e) {
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logger.Warning("NUMA bind error {} for device thread {} - continuing without binding", e.what(), data_stream);
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}
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try {
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LoadCalibrationToFPGA(data_stream);
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frame_transformation_ready.wait();
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logger.Debug("Device thread {} start FPGA action", data_stream);
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acquisition_device[data_stream].StartAction(experiment);
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} catch (const JFJochException &e) {
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Cancel(e);
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data_acquisition_ready.count_down();
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logger.ErrorException(e);
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logger.Warning("Device thread {} done due to an error", data_stream);
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return;
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}
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data_acquisition_ready.count_down();
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try {
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logger.Debug("Device thread {} wait for FPGA action complete", data_stream);
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acquisition_device[data_stream].WaitForActionComplete();
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} catch (const JFJochException &e) {
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logger.ErrorException(e);
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Cancel(e);
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logger.ErrorException(e);
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logger.Warning("Device thread {} done due to an error", data_stream);
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return;
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}
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logger.Info("Device thread {} done", data_stream);
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}
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void JFJochReceiver::MeasurePedestalThread(uint16_t data_stream, uint16_t module_number, uint16_t storage_cell,
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uint32_t threadid, bool ignore) {
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try {
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NUMAHWPolicy::RunOnNode(acquisition_device[data_stream].GetNUMANode());
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} catch (const JFJochException &e) {
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logger.Error("HW bind error {}", e.what());
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}
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JFPedestalCalc pedestal_calc(experiment);
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uint64_t starting_frame = storage_cell + threadid * experiment.GetStorageCellNumber();
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uint64_t frame_stride = experiment.GetStorageCellNumber() * pedestal_nthreads;
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uint32_t storage_cell_header = UINT32_MAX;
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try {
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for (size_t frame = starting_frame; frame < experiment.GetFrameNum(); frame += frame_stride) {
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// Frame will be processed only if one already collects frame+2
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acquisition_device[data_stream].Counters().WaitForFrame(frame + 2, module_number);
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if (acquisition_device[data_stream].Counters().IsFullModuleCollected(frame, module_number) && !ignore) {
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auto output = acquisition_device[data_stream].GetDeviceOutput(frame, module_number);
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// Partial packets will bring more problems, than benefit
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pedestal_calc.AnalyzeImage((uint16_t *) output->pixels);
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storage_cell_header = (output->module_statistics.debug >> 8) & 0xF;
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}
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acquisition_device[data_stream].FrameBufferRelease(frame, module_number);
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UpdateMaxDelay(acquisition_device[data_stream].Counters().CalculateDelay(frame, module_number));
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}
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uint64_t offset = experiment.GetFirstModuleOfDataStream(data_stream) + module_number;
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if (!only_2nd_sc_pedestal)
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offset += experiment.GetModulesNum() * storage_cell;
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if (!ignore)
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*pedestal[offset] += pedestal_calc;
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current_status.SetProgress(GetProgress());
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current_status.SetStatus(GetStatus());
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} catch (const JFJochException &e) {
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Cancel(e);
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}
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logger.Debug("Pedestal calculation thread for data stream {} module {} storage cell {} -> header {} done",
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data_stream, module_number, storage_cell, storage_cell_header);
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}
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void JFJochReceiver::FrameTransformationThread(uint32_t threadid) {
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std::unique_ptr<MXAnalyzer> analyzer;
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try {
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numa_policy.Bind(threadid);
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analyzer = std::make_unique<MXAnalyzer>(experiment);
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} catch (const JFJochException &e) {
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frame_transformation_ready.count_down();
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logger.Error("Thread setup error {}", e.what());
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Cancel(e);
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return;
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}
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FrameTransformation transformation(experiment);
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frame_transformation_ready.count_down();
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uint16_t az_int_min_bin = std::floor(az_int_mapping.QToBin(experiment.GetLowQForBkgEstimate_recipA()));
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uint16_t az_int_max_bin = std::ceil(az_int_mapping.QToBin(experiment.GetHighQForBkgEstimate_recipA()));
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uint64_t image_number;
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while (images_to_go.Get(image_number) != 0) {
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try {
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logger.Debug("Frame transformation thread - trying to get image {}", image_number);
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// If data acquisition is finished and fastest frame for the first device is behind
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acquisition_device[0].Counters().WaitForFrame(image_number + 1);
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logger.Debug("Frame transformation thread - frame arrived {}", image_number + 1);
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if (acquisition_device[0].Counters().IsAcquisitionFinished() &&
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(acquisition_device[0].Counters().GetFastestFrameNumber() < image_number)) {
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logger.Debug("Frame transformation thread - skipping image {}", image_number);
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continue;
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}
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DataMessage message{};
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message.number = image_number;
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message.original_number = image_number;
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message.user_data = experiment.GetImageAppendix();
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message.run_number = experiment.GetRunNumber();
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message.run_name = experiment.GetRunName();
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ImageMetadata metadata(experiment);
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AzimuthalIntegrationProfile az_int_profile_image(az_int_mapping);
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auto local_spot_finding_settings = GetSpotFindingSettings();
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logger.Debug("Frame transformation thread - processing image from FPGA {}", image_number);
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for (int d = 0; d < ndatastreams; d++) {
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for (int m = 0; m < experiment.GetModulesNum(d); m++) {
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acquisition_device[d].Counters().WaitForFrame(image_number + 1, m);
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if (acquisition_device[d].Counters().IsAnyPacketCollected(image_number, m)) {
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const DeviceOutput* output = acquisition_device[d].GetDeviceOutput(image_number, m);
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metadata.Process(output);
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size_t module_abs_number = experiment.GetFirstModuleOfDataStream(d) + m;
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adu_histogram_module[module_abs_number].Add(*output);
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az_int_profile_image.Add(*output);
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analyzer->ReadFromFPGA(output, local_spot_finding_settings, module_abs_number);
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transformation.ProcessModule(output, d);
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} else
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transformation.FillNotCollectedModule(m, d);
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acquisition_device[d].FrameBufferRelease(image_number, m);
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}
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auto delay = acquisition_device[d].Counters().CalculateDelay(image_number);
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UpdateMaxDelay(delay);
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if (delay > message.receiver_aq_dev_delay)
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message.receiver_aq_dev_delay = delay;
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}
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metadata.Export(message, 256 * experiment.GetModulesNum() * experiment.GetSummation());
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if (message.image_collection_efficiency == 0.0f) {
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plots.AddEmptyImage(message);
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continue;
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}
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analyzer->Process(message, local_spot_finding_settings);
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message.receiver_free_send_buf = send_buf_ctrl.GetAvailBufLocations();
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message.az_int_profile = az_int_profile_image.GetResult();
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message.bkg_estimate = az_int_profile_image.GetMeanValueOfBins(az_int_min_bin, az_int_max_bin);
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plots.Add(message, az_int_profile_image);
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preview_image.UpdateImage(transformation.GetImage(), message.spots);
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if (message.indexing_result)
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preview_image_indexed.UpdateImage(transformation.GetImage(), message.spots);
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images_collected++;
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if (!serialmx_filter.ApplyFilter(message))
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images_skipped++;
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else {
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auto loc = send_buf_ctrl.GetBufLocation();
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if (loc == nullptr) // No free buffer locations - continue
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continue;
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auto writer_buffer = (uint8_t *) loc->get_ptr();
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CBORStream2Serializer serializer(writer_buffer, experiment.GetSendBufferLocationSize());
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PrepareCBORImage(message, experiment, nullptr, 0);
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serializer.SerializeImage(message);
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if (experiment.GetSendBufferLocationSize() - serializer.GetImageAppendOffset()
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< experiment.GetMaxCompressedSize())
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throw JFJochException(JFJochExceptionCategory::ArrayOutOfBounds,
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"Not enough memory to save image");
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size_t image_size = transformation.CompressImage(writer_buffer + serializer.GetImageAppendOffset());
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serializer.AppendImage(image_size);
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compressed_size += image_size;
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if (zmq_preview_socket != nullptr)
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zmq_preview_socket->SendImage(writer_buffer, serializer.GetBufferSize());
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if (push_images_to_writer) {
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image_pusher.SendImage(writer_buffer, serializer.GetBufferSize(), message.number, loc);
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images_sent++; // Handle case when image not sent properly
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} else
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loc->release();
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UpdateMaxImage(message.number);
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}
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logger.Debug("Frame transformation thread - done sending image {} / {}", image_number, message.number);
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current_status.SetProgress(GetProgress());
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current_status.SetStatus(GetStatus());
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} catch (const JFJochException &e) {
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logger.ErrorException(e);
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Cancel(e);
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}
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}
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logger.Debug("Sum&compression thread done");
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}
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float JFJochReceiver::GetEfficiency() const {
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uint64_t expected_packets = 0;
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uint64_t received_packets = 0;
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for (int d = 0; d < ndatastreams; d++) {
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expected_packets += acquisition_device[d].Counters().GetExpectedPackets();
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received_packets += acquisition_device[d].Counters().GetTotalPackets();
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}
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if ((expected_packets == received_packets) || (expected_packets == 0))
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return 1.0;
|
|
else
|
|
return received_packets / static_cast<double>(expected_packets);
|
|
}
|
|
|
|
void JFJochReceiver::Cancel(bool silent) {
|
|
if (!silent) {
|
|
// Remote abort: This tells FPGAs to stop, but doesn't do anything to CPU code
|
|
logger.Warning("Cancelling on request");
|
|
cancelled = true;
|
|
}
|
|
|
|
for (int d = 0; d < ndatastreams; d++)
|
|
acquisition_device[d].Cancel();
|
|
}
|
|
|
|
void JFJochReceiver::Cancel(const JFJochException &e) {
|
|
logger.Error("Cancelling data collection due to exception");
|
|
logger.ErrorException(e);
|
|
// Error abort: This tells FPGAs to stop and also prevents deadlock in CPU code, by setting abort to 1
|
|
cancelled = true;
|
|
|
|
for (int d = 0; d < ndatastreams; d++)
|
|
acquisition_device[d].Cancel();
|
|
}
|
|
|
|
float JFJochReceiver::GetProgress() const {
|
|
int64_t frames = experiment.GetImageNum();
|
|
if (frames == 0)
|
|
frames = experiment.GetFrameNum();
|
|
if ((frames == 0) || (acquisition_device[0].Counters().IsAcquisitionFinished()))
|
|
return 1.0;
|
|
else
|
|
return static_cast<float>(acquisition_device[0].Counters().GetSlowestFrameNumber()) / static_cast<float>(frames);
|
|
}
|
|
|
|
void JFJochReceiver::FinalizeMeasurement() {
|
|
if (!frame_transformation_futures.empty()) {
|
|
for (auto &future: frame_transformation_futures)
|
|
future.get();
|
|
|
|
logger.Info("All processing threads done");
|
|
}
|
|
|
|
current_status.SetProgress(100.0);
|
|
current_status.SetStatus(GetStatus());
|
|
|
|
if (push_images_to_writer) {
|
|
EndMessage message{};
|
|
message.max_image_number = max_image_number_sent;
|
|
message.images_collected_count = images_collected;
|
|
message.images_sent_to_write_count = images_sent;
|
|
|
|
message.max_receiver_delay = max_delay;
|
|
message.efficiency = GetEfficiency();
|
|
message.end_date = time_UTC(std::chrono::system_clock::now());
|
|
message.run_number = experiment.GetRunNumber();
|
|
message.run_name = experiment.GetRunName();
|
|
|
|
message.az_int_result["dataset"] = plots.GetAzIntProfile();
|
|
|
|
for (int i = 0; i < adu_histogram_module.size(); i++)
|
|
message.adu_histogram["module" + std::to_string(i)] = adu_histogram_module[i].GetHistogram();
|
|
|
|
if (!image_pusher.EndDataCollection(message))
|
|
logger.Error("End message not sent via ZeroMQ (time-out)");
|
|
|
|
logger.Info("Disconnected from writers");
|
|
}
|
|
|
|
if (experiment.GetImageNum() > 0) {
|
|
for (int d = 0; d < ndatastreams; d++)
|
|
acquisition_device[d].Cancel();
|
|
}
|
|
|
|
end_time = std::chrono::system_clock::now();
|
|
|
|
for (auto &future : data_acquisition_futures)
|
|
future.get();
|
|
|
|
logger.Info("Devices stopped");
|
|
|
|
if (!send_buf_ctrl.CheckIfBufferReturned(std::chrono::seconds(10))) {
|
|
logger.Error("Send commands not finalized in 10 seconds");
|
|
throw JFJochException(JFJochExceptionCategory::ZeroMQ, "Send commands not finalized in 10 seconds");
|
|
}
|
|
logger.Info("Receiving data done");
|
|
|
|
if (push_images_to_writer)
|
|
image_pusher.Finalize();
|
|
|
|
current_status.SetProgress({});
|
|
current_status.SetStatus(GetStatus());
|
|
|
|
logger.Info("Writing process finalized");
|
|
}
|
|
|
|
void JFJochReceiver::SetSpotFindingSettings(const SpotFindingSettings &in_spot_finding_settings) {
|
|
std::unique_lock<std::mutex> ul(spot_finding_settings_mutex);
|
|
DiffractionExperiment::CheckDataProcessingSettings(in_spot_finding_settings);
|
|
spot_finding_settings = in_spot_finding_settings;
|
|
for (int i = 0; i < ndatastreams; i++)
|
|
acquisition_device[i].SetSpotFinderParameters(spot_finding_settings);
|
|
}
|
|
|
|
void JFJochReceiver::StopReceiver() {
|
|
if (measurement.valid()) {
|
|
measurement.get();
|
|
logger.Info("Receiver stopped");
|
|
}
|
|
}
|
|
|
|
JFJochReceiver::~JFJochReceiver() {
|
|
if (measurement.valid())
|
|
measurement.get();
|
|
}
|
|
|
|
SpotFindingSettings JFJochReceiver::GetSpotFindingSettings() {
|
|
std::unique_lock<std::mutex> ul(spot_finding_settings_mutex);
|
|
return spot_finding_settings;
|
|
}
|
|
|
|
void JFJochReceiver::UpdateMaxImage(uint64_t image_number) {
|
|
std::unique_lock<std::mutex> ul(max_image_number_sent_mutex);
|
|
if (image_number + 1 > max_image_number_sent)
|
|
max_image_number_sent = image_number + 1;
|
|
}
|
|
|
|
void JFJochReceiver::UpdateMaxDelay(uint64_t delay) {
|
|
std::unique_lock<std::mutex> ul(max_delay_mutex);
|
|
if (delay > max_delay)
|
|
max_delay = delay;
|
|
}
|
|
|
|
|
|
JFJochReceiverOutput JFJochReceiver::GetFinalStatistics() const {
|
|
JFJochReceiverOutput ret;
|
|
|
|
for (int d = 0; d < ndatastreams; d++) {
|
|
for (int m = 0; m < acquisition_device[d].Counters().GetModuleNumber(); m++) {
|
|
ret.expected_packets.push_back(acquisition_device[d].Counters().GetExpectedPacketsPerModule());
|
|
ret.received_packets.push_back(acquisition_device[d].Counters().GetTotalPackets(m));
|
|
}
|
|
}
|
|
ret.efficiency = GetEfficiency();
|
|
|
|
ret.start_time_ms = std::chrono::duration_cast<std::chrono::milliseconds>(start_time.time_since_epoch()).count();
|
|
ret.end_time_ms = std::chrono::duration_cast<std::chrono::milliseconds>(end_time.time_since_epoch()).count();
|
|
RetrievePedestal(ret.pedestal_result);
|
|
|
|
ret.status = GetStatus();
|
|
return ret;
|
|
}
|
|
|
|
JFJochReceiverStatus JFJochReceiver::GetStatus() const {
|
|
JFJochReceiverStatus ret;
|
|
|
|
ret.indexing_rate = plots.GetIndexingRate();
|
|
ret.bkg_estimate = plots.GetBkgEstimate();
|
|
|
|
if ((experiment.GetImageNum() > 0) && (compressed_size > 0)) {
|
|
ret.compressed_ratio = static_cast<double> ((images_sent + images_skipped)
|
|
* experiment.GetByteDepthImage()
|
|
* experiment.GetModulesNum()
|
|
* RAW_MODULE_SIZE)
|
|
/ static_cast<double> (compressed_size);
|
|
}
|
|
|
|
ret.compressed_size = compressed_size;
|
|
ret.max_receive_delay = max_delay;
|
|
ret.max_image_number_sent = max_image_number_sent;
|
|
ret.images_collected = images_collected;
|
|
ret.images_sent = images_sent;
|
|
ret.images_skipped = images_skipped;
|
|
ret.cancelled = cancelled;
|
|
ret.efficiency = GetEfficiency();
|
|
|
|
return ret;
|
|
}
|
|
|
|
void JFJochReceiver::RetrievePedestal(std::vector<JFModulePedestal> &output) const {
|
|
time_t curr_time = std::chrono::system_clock::to_time_t(start_time);
|
|
for (const auto &pc: pedestal) {
|
|
JFModulePedestal mp;
|
|
if (experiment.GetDetectorMode() == DetectorMode::PedestalG0)
|
|
pc->Export(mp, PEDESTAL_G0_WRONG_GAIN_ALLOWED_COUNT, experiment.GetPedestalG0RMSLimit());
|
|
else
|
|
pc->Export(mp);
|
|
mp.SetCollectionTime(curr_time);
|
|
output.emplace_back(std::move(mp));
|
|
}
|
|
}
|
|
|
|
void JFJochReceiver::LoadCalibrationToFPGA(uint16_t data_stream) {
|
|
if (experiment.IsPedestalRun())
|
|
return; // No calibration loaded for pedestal
|
|
|
|
if (calibration != nullptr)
|
|
acquisition_device[data_stream].InitializeCalibration(experiment, *calibration);
|
|
|
|
// Initialize roi_map
|
|
acquisition_device[data_stream].InitializeROIMap(experiment);
|
|
|
|
size_t m0 = experiment.GetFirstModuleOfDataStream(data_stream);
|
|
std::vector<float> tmp(RAW_MODULE_SIZE);
|
|
for (int m = 0; m < experiment.GetModulesNum(data_stream); m++) {
|
|
// Mask pixels for spot finding based on resolution and user mask
|
|
CalcSpotFinderResolutionMap(tmp.data(), experiment, m0 + m);
|
|
for (int i = 0; i < RAW_MODULE_SIZE; i++) {
|
|
if (user_mask_raw_coord[(m0 + m) * RAW_MODULE_SIZE + i] != 0)
|
|
tmp[i] = 0.0f;
|
|
}
|
|
acquisition_device[data_stream].InitializeSpotFinderResolutionMap(tmp.data(), m);
|
|
|
|
CalcAzIntCorrRawCoord(tmp.data(), experiment, m0 + m);
|
|
acquisition_device[data_stream].InitializeIntegrationMap(az_int_mapping.GetPixelToBinMappingRaw().data()
|
|
+ (m0 + m) * RAW_MODULE_SIZE, tmp.data(), m);
|
|
}
|
|
}
|