Filip Leonarski
06949caf1a
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This is an UNSTABLE release and not recommended for production use (please use rc.11 instead). * jfjoch_broker: Experimental rotation (3D) indexing * jfjoch_broker: Minor fix to error in optimizer potentially returning NaN values Reviewed-on: #18 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
37 lines
1.4 KiB
C++
37 lines
1.4 KiB
C++
// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#ifndef JFJOCH_SPOTANALYSIS_H
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#define JFJOCH_SPOTANALYSIS_H
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#include "../../common/DiffractionSpot.h"
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void GenerateSpotPlot(DataMessage &msg, float d_min_A);
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void CountSpots(DataMessage &msg,
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const DiffractionExperiment& experiment,
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const std::vector<DiffractionSpot> &spots,
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float d_min_A);
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void CountSpots(DataMessage &msg,
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const std::vector<SpotToSave> &spots,
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float d_min_A);
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void MarkIceRings(std::vector<SpotToSave> &spots, float tolerance_q_recipA);
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void FilterSpotsByCount(std::vector<SpotToSave> &input, int64_t count);
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void FilterSpuriousHighResolutionSpots(std::vector<SpotToSave> &spots, float threshold);
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// Ignore high res. spots if there is a gap in (1/d) between two spots of dist_threshold (default: 0.25 A^-1)
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// For less than 4 spots - don't provide resolution estimation
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// For less than 20 spots - take the third best high resolution
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// For 20 spots or more - take the 95% percentile best high resolution spot
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std::optional<float> GetResolution(const std::vector<SpotToSave> &spots);
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void SpotAnalyze(const DiffractionExperiment &experiment,
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const SpotFindingSettings &settings,
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const std::vector<DiffractionSpot> &spots,
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DataMessage &message);
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#endif //JFJOCH_SPOTANALYSIS_H
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