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Jungfraujoch/image_analysis/bragg_prediction/BraggPredictionRot.cpp

141 lines
5.3 KiB
C++

// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#include "BraggPredictionRot.h"
#include "../bragg_integration/SystematicAbsence.h"
int BraggPredictionRot::Calc(const DiffractionExperiment &experiment, const CrystalLattice &lattice,
const BraggPredictionSettings &settings) {
const auto geom = experiment.GetDiffractionGeometry();
const auto det_width_pxl = static_cast<float>(experiment.GetXPixelsNum());
const auto det_height_pxl = static_cast<float>(experiment.GetYPixelsNum());
const float one_over_dmax = 1.0f / settings.high_res_A;
const float one_over_dmax_sq = one_over_dmax * one_over_dmax;
float one_over_wavelength = 1.0f / geom.GetWavelength_A();
const Coord Astar = lattice.Astar();
const Coord Bstar = lattice.Bstar();
const Coord Cstar = lattice.Cstar();
const Coord S0 = geom.GetScatteringVector();
std::vector<float> rot = geom.GetPoniRotMatrix().transpose().arr();
// Precompute detector geometry constants
float beam_x = geom.GetBeamX_pxl();
float beam_y = geom.GetBeamY_pxl();
float det_distance = geom.GetDetectorDistance_mm();
float pixel_size = geom.GetPixelSize_mm();
float F = det_distance / pixel_size;
const auto gon_opt = experiment.GetGoniometer();
if (!gon_opt.has_value())
throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
"BraggPredictionRotationCPU requires a goniometer axis");
const GoniometerAxis& gon = *gon_opt;
const Coord m2 = gon.GetAxis().Normalize();
const Coord m1 = (m2 % S0).Normalize();
const Coord m3 = (m1 % m2).Normalize();
const float m2_S0 = m2 * S0;
const float m3_S0 = m3 * S0;
int i = 0;
const float max_angle_rad = settings.max_angle * static_cast<float>(M_PI) / 180.f;
for (int h = -settings.max_hkl; h <= settings.max_hkl; h++) {
// Precompute A* h contribution
for (int k = -settings.max_hkl; k <= settings.max_hkl; k++) {
// Accumulate B* k contribution
for (int l = -settings.max_hkl; l <= settings.max_hkl; l++) {
if (systematic_absence(h, k, l, settings.centering))
continue;
if (i >= max_reflections)
continue;
Coord p0 = Astar * h + Bstar * k + Cstar * l;
float p0_sq = p0 * p0;
if (p0_sq <= 0.0f || p0_sq > one_over_dmax_sq)
continue;
const float p0_m1 = p0 * m1;
const float p0_m2 = p0 * m2;
const float p0_m3 = p0 * m3;
const float rho_sq = p0_sq - (p0_m2 * p0_m2);
const float p_m3 = (- p0_sq / 2 - p0_m2 * m2_S0) / m3_S0;
const float p_m2 = p0_m2;
const float p_m1_opt[2] = {
std::sqrt(rho_sq - p_m3 * p_m3),
-std::sqrt(rho_sq - p_m3 * p_m3)
};
// No solution for Laue equations
if ((rho_sq < p_m3 * p_m3) || (p0_sq > 4 * S0 * S0))
continue;
for (const auto& p_m1 : p_m1_opt) {
if (i >= max_reflections)
continue;
const float cosphi = (p_m1 * p0_m1 + p_m3 * p0_m3) / rho_sq;
const float sinphi = (p_m1 * p0_m3 - p_m3 * p0_m1) / rho_sq;
Coord p = m1 * p_m1 + m2 * p_m2 + m3 * p_m3; // p0 vector "rotated" to diffracting condition
Coord S = S0 + p;
float phi = -1.0f * std::atan2(sinphi, cosphi) * 180.0f / static_cast<float>(M_PI);
if (phi > max_angle_rad || phi < -max_angle_rad)
continue;
const float lorentz_reciprocal = std::fabs(m2 * (S % S0))/(S*S0);
Coord S_local = S0 + p0;
// Inlined RecipToDector with rot1 and rot2 (rot3 = 0)
// Apply rotation matrix transpose
float S_rot_x = rot[0] * S_local.x + rot[1] * S_local.y + rot[2] * S_local.z;
float S_rot_y = rot[3] * S_local.x + rot[4] * S_local.y + rot[5] * S_local.z;
float S_rot_z = rot[6] * S_local.x + rot[7] * S_local.y + rot[8] * S_local.z;
if (S_rot_z <= 0)
continue;
float x = beam_x + F * S_rot_x / S_rot_z;
float y = beam_y + F * S_rot_y / S_rot_z;
if ((x < 0) || (x >= det_width_pxl) || (y < 0) || (y >= det_height_pxl))
continue;
float dist_ewald_sphere = std::fabs(p0_sq - one_over_wavelength);
float d = 1.0f / sqrtf(p0_sq);
reflections[i] = Reflection{
.h = h,
.k = k,
.l = l,
.predicted_x = x,
.predicted_y = y,
.d = d,
.dist_ewald = dist_ewald_sphere,
.lp = lorentz_reciprocal,
.S_x = S.x,
.S_y = S.y,
.S_z = S.z
};
i++;
}
}
}
}
return i;
}