leonarski_fandClaude Opus 5.5 9f6bb00b61 Merge branch 'long-axis' into rc175: FFT indexer unfolds lattice rows the histogram sampling aliased ...

Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01SVmAWnzCmRKAXVUCdc4iNi

2026-10-10 00:52:02 +02:00

..

azint

GPU azimuthal profile: sum the corrected values in fixed point

2026-10-08 12:33:34 +02:00

beam_stop

Thread count from the CPUs the process may use, not the machine's

2026-10-08 11:15:29 +02:00

bragg_integration

rugnux: background clip scaled by the CCD gain measured in the pre-scan

2026-10-09 21:18:12 +02:00

bragg_prediction

BraggPredictionRot: walk only the l of each column that can pass the phi test

2026-10-08 06:46:28 +02:00

dark_mask_analysis

v1.0.0-rc.148 (#58)

2026-06-08 08:30:35 +02:00

geom_refinement

Thread count from the CPUs the process may use, not the machine's

2026-10-08 11:15:29 +02:00

hot_pixels

HotPixelFinder: mask dead pixels, and run on CCD sweeps too

2026-10-08 06:53:40 +02:00

image_preprocessing

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

indexing

FFTIndexer: unfold lattice rows the histogram sampling aliased

2026-10-09 23:07:42 +02:00

lattice_search

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

roi

v1.0.0-rc.170 (#80)

2026-09-16 18:17:46 +02:00

rotation_indexer

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

scale_merge

Merge branch 'sg-arms' into rc175: every merge starts from G = 1; the all-observation arm merged and searched beside the first

2026-10-10 00:42:14 +02:00

spot_finding

GPU azimuthal profile: sum the corrected values in fixed point

2026-10-08 12:33:34 +02:00

structure_refinement

rugnux --model: score the twin hypothesis too, and take the maps from the merge the model prefers

2026-10-09 19:40:22 +02:00

CMakeLists.txt

Move the atomic-model code to image_analysis/structure_refinement/ and WriteModel to writer/

2026-10-07 14:05:37 +02:00

IndexAndRefine.cpp

Revert "rugnux: a rotation frame the sweep's cell refuses is tried on that cell scaled"

2026-10-09 09:13:49 +02:00

IndexAndRefine.h

Revert "rugnux: a rotation frame the sweep's cell refuses is tried on that cell scaled"

2026-10-09 09:13:49 +02:00

IntegrationOutcome.h

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

LoadFCalcFromMtz.cpp

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

LoadFCalcFromMtz.h

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

MXAnalysisAfterFPGA.cpp

1.0.0-rc.174 (#84)

2026-10-06 14:03:18 +02:00

MXAnalysisAfterFPGA.h

v1.0.0-rc.156 (#66)

2026-07-03 19:18:56 +02:00

MXAnalysisWithoutFPGA.cpp

rugnux report: count overloads and overlapping spots, warn with advice

2026-10-09 18:36:25 +02:00

MXAnalysisWithoutFPGA.h

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

ReflectionArena.h

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

SensorAbsorption.h

v1.0.0-rc.173 (#83)

2026-09-29 15:57:32 +02:00

UpdateReflectionResolution.cpp

v1.0.0-rc.167 (#77)

2026-09-09 07:25:13 +02:00

UpdateReflectionResolution.h

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

WriteReflections.cpp

GitInfo: a source tree without its own git history builds, reporting commit "unknown"

2026-10-09 19:04:22 +02:00

WriteReflections.h

Merged mmCIF: drop the scaled unmerged block

2026-10-09 18:51:56 +02:00