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Jungfraujoch/image_puller/ReceiveRingBuffer.h
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leonarski_fandFilip Leonarski 19b135186d
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v1.0.0-rc.175 (#85)
* Rugnux: Processes a collection live while jfjoch_broker writes it (`rugnux <master.h5> <broker URL>`).
* Rugnux: Processing starts on the first images and confirms its choices once all are in, so analysis can begin during collection.
* Rugnux: Faster processing, especially on servers with several GPUs and CPU sockets and on computers without a GPU (`--no-gpu`, macOS).
* Rugnux: Uses much less GPU memory, so large data sets stay on the GPU of smaller cards, and a data set too large for the card is processed on the CPU instead.
* Rugnux: On macOS, Bragg integration runs on the Apple GPU.
* Rugnux: Better handling of twinning and pseudo-symmetry, with the twin hypothesis written as `<prefix>_twin_<SG>.mtz`, and a wrong `--model` no longer confirms the data or decides the hand.
* Rugnux: `--model` accepts predicted (AlphaFold) models and falls back to molecular replacement when the model is not placed as a rigid body (experimental `--mr` forces it), settling space group, hand and twinning and writing a different answer as `<prefix>_mr.mtz`.
* Rugnux: Molecular replacement is faster and settles the space group in more cases with several copies in the asymmetric unit.
* Rugnux: Deposition-ready mmCIF, a richer report, and numbered steps on the terminal with the full log in `<prefix>_log.txt`; `_P1.mtz`, `--estimate-beam-center` and `--beam-center-search` are removed.
* Rugnux: The beam-stop shadow is found correctly on tilted detectors.
* Rugnux: Stills files that record a stationary goniometer axis get the default stills geometry refinement.
* jfjoch_viewer: "Analyze dataset" uses the same defaults as a bare `rugnux <file>`, and shows the results of processed CBF, marCCD and SMV sweeps.
* jfjoch_viewer: The Files panel refreshes on F5 and every few seconds, and the plot type and other selections stay put during live collection.
* jfjoch_writer: Memory stays bounded and old data files are closed efficiently on long runs, any failure ends the run in an error state the broker is told about, and the master file appears only after its data files; the ZeroMQ pusher logs when a stalled writer makes it drop images.
* Fixes: The TCP image pusher no longer blocks the broker's receiver, GPU out-of-memory failures stop with a clear message, and the XDS plugin masks module and chip edges.

---------

Co-authored-by: Filip Leonarski <jungfrau@filips-mac-mini.home>
Reviewed-on: #85
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
2026-10-16 15:34:43 +02:00

53 lines
2.3 KiB
C++

// SPDX-FileCopyrightText: 2026 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#pragma once
#include <condition_variable>
#include <cstdint>
#include <deque>
#include <memory>
#include <mutex>
// A received message lives here from the moment it comes off the socket until the last consumer is
// done with it - the writer has stored the image and the republish thread has sent it. Both consumers
// hold a shared_ptr to the region, and the region's destructor is what gives the bytes back.
struct ReceiveBufferRegion {
uint8_t *data = nullptr;
size_t size = 0;
};
// Bounds the memory a puller holds in received, not yet consumed, messages - by bytes, which is the
// quantity that matters, where the queues in front of and behind it count messages. One image of a
// large detector is tens of megabytes, so a queue of a thousand of them is a quantity of memory nobody
// chose.
//
// Regions are handed out in arrival order and the space is taken back in arrival order too, which is
// what makes it a ring: the writer and the republish thread may finish with messages out of order, so
// a region released early is only remembered, and the space is reclaimed once everything received
// before it is released as well. Republish holds at most its queue's worth of messages, so that is as
// far as the reclaim can lag.
//
// A message larger than the whole ring goes on the heap instead, so an oversized START or END message
// cannot wedge the receiver; everything else waits for space, which is the back-pressure that keeps the
// sender from running ahead.
class ReceiveRingBuffer {
struct State;
std::shared_ptr<State> state;
public:
explicit ReceiveRingBuffer(size_t capacity);
// Blocks until the bytes are available; returns nullptr once Stop() has been called. A request
// larger than the capacity (so every request of a ring of capacity 0) is served from the heap,
// at once and whether stopped or not.
std::shared_ptr<ReceiveBufferRegion> Allocate(size_t size);
// Releases every waiter in Allocate; the regions already handed out stay valid.
void Stop();
size_t GetCapacity() const;
// Bytes held in live regions right now / at most since construction (heap fallbacks included).
size_t GetUtilization() const;
size_t GetMaxUtilization() const;
};