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Jungfraujoch/broker/JFJochServices.cpp
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leonarski_f 84228bf8be
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v1.0.0-rc.173 (#83)
* jfjoch_broker: Optional per-dataset authentication - statistics, images and plots can require a bearer token, which jfjoch_viewer supports.
* jfjoch_viewer: Dark mode and a theme-matched colour scheme, a magnifier panel, and simpler contrast and background controls.
* Rugnux: Multiple performance improvements on GPU and CPU (CPU-only processing up to 40% faster, faster image decoding on ARM), with unchanged results.
* Rugnux: `--model` rigid-body refinement runs on the GPU, and the model-validation check is faster and more reliable.
* Rugnux: Improved scaling and merging - error model, outlier rejection, absorption correction and French-Wilson amplitudes now agree more closely with XDS and ctruncate.
* Rugnux: Improved integration - radial background on powder and ice rings, crowded rotation data keep their reflections, and CPU-only builds integrate large unit cells as GPU builds do.
* Rugnux: More robust detector geometry - measured beam centre, X-ray bandwidth and goniometer rate, and geometry refinement accepted only on significant evidence.
* Rugnux: Merged files are written in the standard setting, or in the setting of a reference MTZ, structure-factor mmCIF or model, with its free-R flags.
* Rugnux: Richer report - ice and powder rings, further lattices, superstructure candidates and mosaicity, with warnings worded as prompts to check.
* Rugnux: Clear error messages when a data set needs more GPU or host memory than is available.

Reviewed-on: #83
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
2026-09-29 15:57:32 +02:00

377 lines
14 KiB
C++

// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#include "JFJochServices.h"
#include "../common/JFJochException.h"
#include "../detector_control/SLSDetectorWrapper.h"
#include "../detector_control/DectrisDetectorWrapper.h"
JFJochServices::JFJochServices(Logger &in_logger) : logger(in_logger) {}
void JFJochServices::Preflight(const DiffractionExperiment& experiment) {
if (receiver == nullptr)
return;
receiver->Preflight(experiment);
}
void JFJochServices::Start(const DiffractionExperiment& experiment,
const PixelMask &pixel_mask,
const JFCalibration *calibration) {
logger.Info("Measurement start for: {}", experiment.GetFilePrefix());
cannot_stop_detector = false;
if (receiver == nullptr) {
logger.Info(" Done!");
return;
}
logger.Info(" ... receiver start");
if (image_puller)
image_puller->ResumeAndClear();
receiver->Start(experiment, pixel_mask, calibration, image_puller);
// From here the receiver is running asynchronously. If starting the detector fails, stop the
// receiver again so the service returns to idle and the run can be retried without
// re-initialising. The detector failure is then propagated (a critical detector error stays
// critical, so the broker still goes to the Error state).
try {
std::shared_lock ul(detector_mutex);
if (detector && !experiment.IsUsingInternalPacketGen()) {
logger.Info(" ... detector start");
detector->Start(experiment);
}
} catch (const std::exception &e) {
logger.Error(" ... detector failed to start ({}) - stopping detector and receiver", e.what());
// Best-effort cleanup - it must not replace the original detector exception (which may be
// critical), so swallow anything it throws and let the throw below re-raise e. The detector
// may have partially armed before failing, so stop it too; otherwise it lingers in a BUSY
// state and the next start fails with "detector busy" until a manual re-initialisation.
try {
{
std::shared_lock ul(detector_mutex);
if (detector)
detector->Stop();
}
receiver->Cancel(false);
receiver->Stop();
} catch (const std::exception &stop_error) {
logger.Warning("Stop after failed start reported: {}", stop_error.what());
}
throw;
}
logger.Info(" Done!");
}
void JFJochServices::Off() {
// Disconnect explicitly rather than relying on the destructor: the receiver service keeps its
// own shared_ptr to the puller of the last run, so dropping this one does not necessarily close
// the socket, and a puller left connected keeps taking its share of the detector stream.
if (image_puller)
image_puller->Disconnect();
image_puller.reset();
std::unique_ptr<DetectorWrapper> old_detector;
{
std::unique_lock ul(detector_mutex);
old_detector = std::move(detector);
}
if (old_detector) {
old_detector->Deactivate();
// destroyed here, outside lock
}
}
void JFJochServices::On(DiffractionExperiment &x) {
if (x.IsUsingInternalPacketGen() || (receiver == nullptr)) {
std::unique_lock ul(detector_mutex);
detector.reset();
} else {
logger.Info("Detector on");
// The previous puller has to be disconnected before the new one connects. Dropping the
// shared_ptr is not enough: the receiver service keeps its own reference to the puller of
// the last run, so the socket would stay open - and two PULL sockets on the same DECTRIS
// stream share the messages round-robin, so the old one silently swallows half of the
// stream, the start message included. The run then never starts and the receiver waits for
// a start message that has already been thrown away.
if (image_puller)
image_puller->Disconnect();
std::unique_ptr<DetectorWrapper> new_detector;
switch (x.GetDetectorType()) {
case DetectorType::EIGER:
case DetectorType::JUNGFRAU:
new_detector = std::make_unique<SLSDetectorWrapper>();
image_puller.reset();
break;
case DetectorType::DECTRIS:
new_detector = std::make_unique<DectrisDetectorWrapper>();
image_puller = std::make_shared<ZMQImagePuller>(x.GetDetectorSetup().GetDECTRISStream2Addr());
image_puller->Suspend();
break;
}
new_detector->Initialize(x, receiver->GetNetworkConfig());
{
std::unique_lock ul(detector_mutex);
detector = std::move(new_detector);
}
logger.Info(" ... done");
}
}
JFJochServicesOutput JFJochServices::Stop() {
JFJochServicesOutput ret;
// Captured as an exception_ptr (not a copied JFJochException) so the dynamic type survives: a
// critical hardware fault (e.g. PCIeDeviceException) must stay critical when re-thrown, otherwise
// slicing it to a plain JFJochException would send the state machine to Idle instead of Error.
std::exception_ptr exception;
bool detector_error = false;
if (receiver != nullptr) {
try {
{
std::shared_lock ul(detector_mutex);
if (detector) {
logger.Info("Wait for detector idle");
DetectorState state = detector->GetState();
while ((!cannot_stop_detector)
&& ((state == DetectorState::WAITING) || (state == DetectorState::BUSY))) {
// check detector state every 5 ms
std::this_thread::sleep_for(std::chrono::milliseconds(5));
state = detector->GetState();
}
if (state == DetectorState::IDLE) {
logger.Info(" ... detector idle");
receiver->Cancel(true); // cancel silently
} else {
logger.Error(" ... detector in error state");
receiver->Cancel(false);
detector_error = true;
}
}
}
logger.Info("Wait for receiver done");
ret.receiver_output = receiver->Stop();
if (image_puller)
image_puller->Suspend();
logger.Info(" ... Receiver efficiency: {} % Max delay: {} Compression ratio {}x",
static_cast<int>(ret.receiver_output.efficiency * 100.0),
ret.receiver_output.status.max_receive_delay.value_or(0),
static_cast<int>(std::round(ret.receiver_output.status.compressed_ratio.value_or(1))));
if (ret.receiver_output.efficiency < 1.0) {
for (int i = 0; i < ret.receiver_output.received_packets.size(); i++) {
if (ret.receiver_output.received_packets[i] != ret.receiver_output.expected_packets[i])
logger.Info(" ... Module: {} Packets received: {} out of {}", i,
ret.receiver_output.received_packets[i], ret.receiver_output.expected_packets[i]);
}
}
// A writer that broke mid-run (e.g. a lost connection) leaves a truncated file. This is
// reported to the caller via receiver_output.writer_err (the state machine surfaces it as
// an error message) - it is not a detector fault, so it does not need re-initialisation.
logger.Info(" ... finished with success");
} catch (const JFJochException &e) {
logger.Error(" ... finished with error {}", e.what());
exception = std::current_exception();
}
} else {
logger.Info("No receiver - sleeping for 30 seconds");
std::this_thread::sleep_for(std::chrono::seconds(30));
logger.Info("Sleep done");
}
// A detector fault must win over an ordinary receiver/writer error: it needs re-initialisation,
// so raise the critical exception first. If only the receiver failed, the run can be retried from
// Idle, so that ordinary error is raised second.
if (detector_error)
throw JFJochCriticalException("Error in detector operation");
if (exception)
std::rethrow_exception(exception);
return ret;
}
void JFJochServices::Cancel() {
std::shared_lock ul(detector_mutex);
if (detector) {
// Best effort - if detector cannot be stopped, this is OK, important to still stop receiver
try {
detector->Stop();
} catch (...) {
cannot_stop_detector = true;
}
}
if (receiver != nullptr)
receiver->Cancel(false);
}
JFJochServices &JFJochServices::Receiver(JFJochReceiverService *input) {
receiver = input;
return *this;
}
std::optional<JFJochReceiverStatus> JFJochServices::GetReceiverStatus() const {
if (receiver == nullptr)
return {};
return receiver->GetStatus();
}
std::optional<float> JFJochServices::GetReceiverProgress() const {
if (receiver == nullptr)
return {};
return receiver->GetProgress();
}
MultiLinePlot JFJochServices::GetPlots(const PlotRequest &request) {
if (receiver == nullptr)
return {};
return receiver->GetDataProcessingPlot(request);
}
void JFJochServices::GetPlotRaw(std::vector<float> &v, PlotType type, const std::string &roi) {
if (receiver != nullptr)
receiver->GetPlotRaw(v, type, roi);
}
void JFJochServices::SetSpotFindingSettings(const SpotFindingSettings &settings) {
if (receiver)
receiver->SetSpotFindingSettings(settings);
}
void JFJochServices::Trigger() {
std::shared_lock ul(detector_mutex);
if (detector && (receiver != nullptr))
detector->Trigger();
}
std::optional<DetectorStatus> JFJochServices::GetDetectorStatus() const {
std::shared_lock ul(detector_mutex, std::defer_lock);
if (ul.try_lock_for(std::chrono::milliseconds(500)) && detector)
return detector->GetStatus();
return {};
}
std::string JFJochServices::GetPreviewJPEG(const PreviewImageSettings &settings, int64_t image_number) const {
if (receiver != nullptr)
return receiver->GetJPEGFromBuffer(settings, image_number);
else
return {};
}
std::string JFJochServices::GetPreviewTIFF(int64_t image_number) const {
if (receiver != nullptr)
return receiver->GetTIFFFromBuffer(image_number);
else
return "";
}
void JFJochServices::ConfigureDetector(const DiffractionExperiment &experiment) {
std::unique_lock ul(detector_mutex); // While configuring detector ensure exclusive access (even though pointer is not modified here)
if (detector)
detector->Configure(experiment);
}
void JFJochServices::LoadInternalGeneratorImage(const DiffractionExperiment &experiment,
const std::vector<uint16_t> &image,
uint64_t image_number) {
if (receiver)
receiver->LoadInternalGeneratorImage(experiment, image, image_number);
}
void JFJochServices::GetXFELPulseID(std::vector<uint64_t> &v) const {
if (receiver)
receiver->GetXFELPulseID(v);
}
void JFJochServices::GetXFELEventCode(std::vector<uint64_t> &v) const {
if (receiver)
receiver->GetXFELEventCode(v);
}
std::vector<DeviceStatus> JFJochServices::GetDeviceStatus() const {
std::vector<DeviceStatus> ret;
if (receiver)
ret = receiver->GetDeviceStatus();
return ret;
}
ZMQPreviewSettings JFJochServices::GetPreviewSocketSettings() {
if (receiver)
return receiver->GetPreviewSocketSettings();
return {};
}
ZMQMetadataSettings JFJochServices::GetMetadataSocketSettings() {
if (receiver)
return receiver->GetMetadataSocketSettings();
return {};
}
void JFJochServices::SetPreviewSocketSettings(const ZMQPreviewSettings &input) {
if (receiver)
receiver->PreviewSocketSettings(input);
}
void JFJochServices::SetMetadataSocketSettings(const ZMQMetadataSettings &input) {
if (receiver)
receiver->MetadataSocketSettings(input);
}
void JFJochServices::GetStartMessageFromBuffer(std::vector<uint8_t> &v) {
if (receiver)
return receiver->GetStartMessageFromBuffer(v);
}
bool JFJochServices::GetImageFromBuffer(std::vector<uint8_t> &v, int64_t image_number) {
if (receiver)
return receiver->GetImageFromBuffer(v, image_number);
return false;
}
ImageBufferStatus JFJochServices::GetImageBufferStatus() const {
if (receiver)
return receiver->GetImageBufferStatus();
else return ImageBufferStatus{.total_slots = 0, .available_slots = 0};
}
void JFJochServices::ClearImageBuffer() const {
if (receiver)
receiver->ClearImageBuffer();
}
void JFJochServices::ClearResults() const {
if (receiver)
receiver->ClearResults();
}
void JFJochServices::LoadDetectorPixelMask(PixelMask &mask) {
std::shared_lock ul(detector_mutex);
if (detector)
detector->LoadPixelMask(mask);
}
void JFJochServices::SetupIndexing(const IndexingSettings &input) {
if (receiver)
receiver->Indexing(input);
}
ImagePusherStatus JFJochServices::GetImagePusherStatus() const {
if (receiver)
return receiver->GetImagePusherStatus();
return {
.pusher_type = ImagePusherType::None,
.address = {},
.connected_writers = 0
};
}