leonarski_f
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This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. jfjoch_process: Generate a dedicated file (_process.h5), which can be used as a replacement for the _master.h5 file for a reanalyzed dataset. jfjoch_process: Improve the performance of scaling and merging, implement on the fly scaling. jfjoch_writer: All final data analysis results are repopulated in the _master.h5 file. jfjoch_scale: Dedicated tool for rescaling/merging existing data. jfjoch_viewer: Fix bugs where pixel labels where displayed on a wrong pixel. WARNING! Scaling and merging are experimental at the moment, and may not provide reasonable results for the time being. Reviewed-on: #56
78 lines
3.3 KiB
C++
78 lines
3.3 KiB
C++
// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#ifndef JFJOCH_INDEXINGSETTINGS_H
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#define JFJOCH_INDEXINGSETTINGS_H
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#include <cstdint>
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enum class IndexingAlgorithmEnum {FFBIDX, FFT, FFTW, Auto, None};
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enum class GeomRefinementAlgorithmEnum {None, OrientationOnly, BeamCenter};
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class IndexingSettings {
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IndexingAlgorithmEnum algorithm;
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int64_t fft_num_vectors = 16*1024;
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float fft_max_unit_cell_A = 500.0;
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float fft_min_unit_cell_A = 10.0;
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float fft_max_angle_deg = 150.0;
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float fft_min_angle_deg = 30.0;
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float fft_high_resolution_A = 2.0;
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float indexing_tolerance = 0.1;
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float max_angle_from_ewald_deg = 2.0;
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float unit_cell_dist_tolerance_vs_reference = 0.05; // relative
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static constexpr float unit_cell_angle_tolerance_deg = 5.0; // degree
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int64_t indexing_threads = 4;
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int64_t viable_cell_min_spots = 9;
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bool blocking_behavior = true;
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bool index_ice_rings = false;
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bool enable_rotation_indexing = false;
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float rotation_indexing_min_angular_range_deg = 20.0;
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float rotation_indexing_angular_stride_deg = 0.5;
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GeomRefinementAlgorithmEnum refinement = GeomRefinementAlgorithmEnum::BeamCenter;
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public:
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IndexingSettings();
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IndexingSettings& ViableCellMinSpots(int64_t input);
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IndexingSettings& Algorithm(IndexingAlgorithmEnum input);
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IndexingSettings& FFT_MaxUnitCell_A(float input);
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IndexingSettings& FFT_MinUnitCell_A(float input);
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IndexingSettings& FFT_MaxAngle_deg(float input);
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IndexingSettings& FFT_MinAngle_deg(float input);
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IndexingSettings& FFT_NumVectors(int64_t input);
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IndexingSettings& FFT_HighResolution_A(float input);
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IndexingSettings& Tolerance(float input);
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IndexingSettings& IndexingThreads(int64_t input);
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IndexingSettings& UnitCellDistTolerance(float input);
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IndexingSettings& GeomRefinementAlgorithm(GeomRefinementAlgorithmEnum input);
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IndexingSettings& IndexIceRings(bool input);
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IndexingSettings& RotationIndexing(bool input);
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IndexingSettings& RotationIndexingMinAngularRange_deg(float input);
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IndexingSettings& RotationIndexingAngularStride_deg(float input);
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IndexingSettings& BlockingBehavior(bool input);
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[[nodiscard]] int64_t GetViableCellMinSpots() const;
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[[nodiscard]] IndexingAlgorithmEnum GetAlgorithm() const;
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[[nodiscard]] GeomRefinementAlgorithmEnum GetGeomRefinementAlgorithm() const;
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[[nodiscard]] float GetFFT_MaxUnitCell_A() const;
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[[nodiscard]] float GetFFT_MinUnitCell_A() const;
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[[nodiscard]] int64_t GetFFT_NumVectors() const;
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[[nodiscard]] float GetFFT_HighResolution_A() const;
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[[nodiscard]] float GetTolerance() const;
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[[nodiscard]] float GetFFT_MinAngle_deg() const;
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[[nodiscard]] float GetFFT_MaxAngle_deg() const;
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[[nodiscard]] int64_t GetIndexingThreads() const;
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[[nodiscard]] float GetUnitCellDistTolerance() const;
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[[nodiscard]] float GetUnitCellAngleTolerance_deg() const;
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[[nodiscard]] bool GetIndexIceRings() const;
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[[nodiscard]] bool GetRotationIndexing() const;
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[[nodiscard]] float GetRotationIndexingMinAngularRange_deg() const;
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[[nodiscard]] float GetRotationIndexingAngularStride_deg() const;
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[[nodiscard]] bool GetBlockingBehavior() const;
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};
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#endif //JFJOCH_INDEXINGSETTINGS_H
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