leonarski_fandClaude Opus 5.5 7e1be959a6 BraggIntegrationEngineCPU: the background clip walks the ring pixels pass A read ...

The sigma-clip pass recomputed the stencil distances over the whole box to find the same background
ring pixels pass A had just summed. Pass A now keeps their values and radial offsets in its own
order, and the clip runs over them - the same pixels, the same sums.

Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01D1G8gJVAy6gp1K5Dz3NE5C

2026-09-26 22:56:29 +02:00

..

azint

v1.0.0-rc.170 (#80)

2026-09-16 18:17:46 +02:00

beam_stop

ShadowFinder: the element-wise full-detector mask updates on all threads

2026-09-26 22:55:17 +02:00

bragg_integration

BraggIntegrationEngineCPU: the background clip walks the ring pixels pass A read

2026-09-26 22:56:29 +02:00

bragg_prediction

BraggPredictionRot: reject solutions far from the frame before the rest of the arithmetic

2026-09-26 22:47:12 +02:00

dark_mask_analysis

v1.0.0-rc.148 (#58)

2026-06-08 08:30:35 +02:00

geom_refinement

BeamCenterFromBackground: skip pixels clearly outside the band before sqrt and atan2

2026-09-26 22:54:37 +02:00

image_preprocessing

v1.0.0-rc.170 (#80)

2026-09-16 18:17:46 +02:00

indexing

CPU FFT indexer and beam-centre shortlist: less serial work

2026-09-26 20:48:08 +02:00

lattice_search

Rugnux: test angle promotions of the metric symmetry; score model frames at the data's best indexing

2026-09-26 13:43:58 +02:00

roi

v1.0.0-rc.170 (#80)

2026-09-16 18:17:46 +02:00

rotation_indexer

RotationIndexer: keep 1024 indexing outcomes, keyed by a digest of the input

2026-09-26 22:46:20 +02:00

scale_merge

ScaledObservations: sample each image on its own thread

2026-09-26 22:52:09 +02:00

spot_finding

CPU analysis: take the azimuthal profile in the adaptive finder's ring pass

2026-09-26 21:18:04 +02:00

CMakeLists.txt

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

IndexAndRefine.cpp

Report the strongest index-2 superstructure class and the cell it doubles to

2026-09-25 08:57:28 +02:00

IndexAndRefine.h

Report the strongest index-2 superstructure class and the cell it doubles to

2026-09-25 08:57:28 +02:00

IntegrationOutcome.h

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

LoadFCalcFromMtz.cpp

rugnux: accept a PDB structure-factor mmCIF as the -z reference

2026-09-25 20:17:03 +02:00

LoadFCalcFromMtz.h

rugnux: accept a PDB structure-factor mmCIF as the -z reference

2026-09-25 20:17:03 +02:00

MXAnalysisAfterFPGA.cpp

v1.0.0-rc.156 (#66)

2026-07-03 19:18:56 +02:00

MXAnalysisAfterFPGA.h

v1.0.0-rc.156 (#66)

2026-07-03 19:18:56 +02:00

MXAnalysisWithoutFPGA.cpp

CPU analysis: take the azimuthal profile in the adaptive finder's ring pass

2026-09-26 21:18:04 +02:00

MXAnalysisWithoutFPGA.h

CPU analysis: take the azimuthal profile in the adaptive finder's ring pass

2026-09-26 21:18:04 +02:00

ReflectionArena.h

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

SensorAbsorption.h

rugnux: measure the X-ray bandwidth from the pre-scan's spot shapes (reported only)

2026-09-23 20:42:46 +02:00

UpdateReflectionResolution.cpp

v1.0.0-rc.167 (#77)

2026-09-09 07:25:13 +02:00

UpdateReflectionResolution.h

v1.0.0-rc.172 (#82)

2026-09-22 06:48:37 +02:00

WriteReflections.cpp

Rugnux: build the unmerged MTZ beside the P1 cross-check merge

2026-09-26 22:45:48 +02:00

WriteReflections.h

Rugnux: build the unmerged MTZ beside the P1 cross-check merge

2026-09-26 22:45:48 +02:00