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Jungfraujoch/image_analysis/image_preprocessing/ImagePreprocessorBuffer.cpp
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v1.0.0-rc.179 (#90)
* Rugnux: Stills processing needs only the unit cell and space group beyond what the file records - detector distance, beam centre, tilt, panel placement, saturation level, gain and polarisation plane are found from the images - and is up to twice as fast.
* Rugnux: Stills can be indexed without a GPU, with a CPU implementation of the fast-feedback indexer (macOS, computers without a GPU).
* Rugnux: Rotation and stills data are integrated in the detector's own units with one gain model, improving data from CCD detectors.
* Web frontend: The Rugnux live page shows the placed model with its electron density and anomalous difference map in a Mol* viewer.

Reviewed-on: #90
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
2026-10-24 14:52:29 +02:00

51 lines
1.9 KiB
C++

// SPDX-FileCopyrightText: 2026 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#include "ImagePreprocessorBuffer.h"
ImagePreprocessorBuffer::ImagePreprocessorBuffer(size_t npixels, bool host_mirror)
: npixels(npixels), buffer(host_mirror ? npixels : 0) {}
ImagePreprocessorBuffer::ImagePreprocessorBuffer(size_t npixels)
: ImagePreprocessorBuffer(npixels, true) {}
void ImagePreprocessorBuffer::Gather(const std::vector<uint32_t> &npixel, std::vector<int32_t> &values) const {
values.resize(npixel.size());
for (size_t i = 0; i < npixel.size(); i++)
values[i] = buffer[npixel[i]];
}
int32_t *ImagePreprocessorBuffer::getGPUBuffer() {
return nullptr;
}
const int32_t *ImagePreprocessorBuffer::getGPUBuffer() const {
return nullptr;
}
PanelBox ImagePreprocessorBuffer::TileBox(int32_t x, int32_t y, int width) const {
for (const auto &p: panels)
if (x >= p.x0 && x < p.x1 && y >= p.y0 && y < p.y1)
return p;
return PanelBox{0, 0, width, static_cast<int32_t>(npixels / width), -1};
}
const int32_t *ImagePreprocessorBuffer::GatherTiles(const std::vector<int32_t> &x, const std::vector<int32_t> &y,
int width, int half) {
const int side = 2 * half + 1;
tiles.resize(x.size() * side * side);
int32_t *out = tiles.data();
for (size_t i = 0; i < x.size(); i++) {
const PanelBox b = TileBox(x[i], y[i], width);
for (int py = y[i] - half; py <= y[i] + half; py++)
for (int px = x[i] - half; px <= x[i] + half; px++)
*out++ = (px < b.x0 || py < b.y0 || px >= b.x1 || py >= b.y1)
? INT32_MIN : buffer[static_cast<size_t>(py) * width + px];
}
return tiles.data();
}
const int32_t *ImagePreprocessorBuffer::HostImage() {
return buffer.data();
}