Files
Jungfraujoch/common/AzimuthalIntegrationMapping.cpp
T

228 lines
8.3 KiB
C++

// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#include <cmath>
#include <thread>
#include <future>
#include "AzimuthalIntegrationMapping.h"
#include "JFJochException.h"
#include "DiffractionGeometry.h"
#include "RawToConvertedGeometry.h"
AzimuthalIntegrationMapping::AzimuthalIntegrationMapping(const DiffractionExperiment &experiment,
const PixelMask& mask,
size_t in_nthreads)
: settings(experiment.GetAzimuthalIntegrationSettings()),
wavelength(experiment.GetWavelength_A()),
width(experiment.GetXPixelsNumConv()),
height(experiment.GetYPixelsNumConv()) {
if (width <= 0)
throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
"Detector width must be above 0");
if (height <= 0)
throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
"Detector height must be above 0");
if (settings.GetBinCount() >= UINT16_MAX)
throw JFJochException(JFJochExceptionCategory::InputParameterInvalid,
"Cannot handle more than 65534 az. int. bins");
polarization_factor = experiment.GetPolarizationFactor();
if (in_nthreads == 0)
nthreads = std::thread::hardware_concurrency();
else
nthreads = in_nthreads;
nthreads = std::clamp<size_t>(nthreads, 1, 64);
if (!experiment.IsGeometryTransformed())
SetupRawGeom(experiment, mask.GetMaskRaw(experiment), nthreads);
else
SetupConvGeom(experiment.GetDiffractionGeometry(),mask.GetMask(), nthreads);
UpdateMaxBinNumber();
}
void AzimuthalIntegrationMapping::SetupConvGeomRows(const DiffractionGeometry &geom, const std::vector<uint32_t> &mask,
size_t row0, size_t row_end) {
for (size_t row = row0; row < row_end && row < height; row++) {
for (size_t col = 0; col < width; col++)
SetupPixel(geom, mask, row * width + col, col, row);
}
}
void AzimuthalIntegrationMapping::SetupConvGeom(const DiffractionGeometry &geom,
const std::vector<uint32_t> &mask,
size_t nthreads) {
pixel_to_bin.resize(width * height, UINT16_MAX);
pixel_resolution.resize(width * height, 0);
corrections.resize(width * height, 0);
if (mask.size() != width * height)
throw JFJochException(JFJochExceptionCategory::InputParameterInvalid, "Mask size invalid");
if (nthreads <= 1) {
SetupConvGeomRows(geom, mask, 0, height);
} else {
nthreads = std::min(nthreads, height);
std::vector<std::future<void>> futures;
for (size_t t = 0; t < nthreads; ++t)
futures.emplace_back(std::async(std::launch::async,
&AzimuthalIntegrationMapping::SetupConvGeomRows,
this, std::cref(geom), std::cref(mask), t * height / nthreads, (t + 1) * height / nthreads));
for (auto &f: futures)
f.get();
}
}
void AzimuthalIntegrationMapping::SetupRawGeom(const DiffractionExperiment &experiment,
const std::vector<uint32_t> &mask, size_t nthreads) {
if (mask.size() != RAW_MODULE_SIZE * experiment.GetModulesNum())
throw JFJochException(JFJochExceptionCategory::InputParameterInvalid, "Mask size invalid");
pixel_to_bin.resize(RAW_MODULE_SIZE * experiment.GetModulesNum(), UINT16_MAX);
pixel_resolution.resize(RAW_MODULE_SIZE * experiment.GetModulesNum(), 0);
corrections.resize(RAW_MODULE_SIZE * experiment.GetModulesNum(), 0);
auto geom = experiment.GetDiffractionGeometry();
if (nthreads <= 1) {
for (int m = 0; m < experiment.GetModulesNum(); m++) {
for (int pxl = 0; pxl < RAW_MODULE_SIZE; pxl++) {
auto [x,y] = RawToConvertedCoordinate(experiment, m, pxl);
SetupPixel(geom, mask, m * RAW_MODULE_SIZE + pxl, x, y);
}
}
} else {
nthreads = std::min<size_t>(nthreads, experiment.GetModulesNum());
std::vector<std::future<void>> futures;
futures.reserve(nthreads);
for (size_t t = 0; t < nthreads; ++t) {
const size_t module_begin = t * experiment.GetModulesNum() / nthreads;
const size_t module_end = (t + 1) * experiment.GetModulesNum() / nthreads;
futures.emplace_back(std::async(std::launch::async, [&, module_begin, module_end] {
for (size_t m = module_begin; m < module_end; ++m) {
for (int pxl = 0; pxl < RAW_MODULE_SIZE; ++pxl) {
auto [x, y] = RawToConvertedCoordinate(experiment, m, pxl);
SetupPixel(geom, mask, m * RAW_MODULE_SIZE + pxl, x, y);
}
}
}));
}
for (auto &f: futures)
f.get();
}
}
void AzimuthalIntegrationMapping::SetupPixel(const DiffractionGeometry &geom,
const std::vector<uint32_t> &mask,
uint32_t pxl, uint32_t col, uint32_t row) {
if (mask[pxl] != 0)
return;
auto x = static_cast<float>(col);
auto y = static_cast<float>(row);
float d = geom.PxlToRes(x, y);
float phi_rad = geom.Phi_rad(x, y);
pixel_resolution[pxl] = d;
float corr = 1.0;
if (settings.IsSolidAngleCorrection())
corr /= geom.CalcAzIntSolidAngleCorr(x, y);
if (settings.IsPolarizationCorrection() && polarization_factor)
corr /= geom.CalcAzIntPolarizationCorr(x, y, polarization_factor.value());
corrections[pxl] = corr;
if (d > 0) {
float q = 2.0f * static_cast<float>(M_PI) / d;
pixel_to_bin[pxl] = settings.GetBin(q, phi_rad * 180.0 / M_PI);
}
}
uint16_t AzimuthalIntegrationMapping::GetBinNumber() const {
return settings.GetBinCount();
}
const std::vector<uint16_t> &AzimuthalIntegrationMapping::GetPixelToBin() const {
return pixel_to_bin;
}
const std::vector<float> &AzimuthalIntegrationMapping::GetBinToQ() const {
return bin_to_q;
}
const std::vector<float> &AzimuthalIntegrationMapping::GetBinToD() const {
return bin_to_d;
}
const std::vector<float> &AzimuthalIntegrationMapping::GetBinToTwoTheta() const {
return bin_to_2theta;
}
const std::vector<float> &AzimuthalIntegrationMapping::GetBinToPhi() const {
return bin_to_phi;
}
uint16_t AzimuthalIntegrationMapping::QToBin(float q) const {
return settings.QToBin(q);
}
void AzimuthalIntegrationMapping::UpdateMaxBinNumber() {
bin_to_q.resize(settings.GetBinCount());
bin_to_d.resize(settings.GetBinCount());
bin_to_2theta.resize(settings.GetBinCount());
bin_to_phi.resize(settings.GetBinCount());
for (int j = 0; j < settings.GetAzimuthalBinCount(); j++) {
for (int i = 0; i < settings.GetQBinCount(); i++) {
bin_to_q[j * settings.GetQBinCount() + i] = static_cast<float>(settings.GetQSpacing_recipA() * (i + 0.5) + settings.GetLowQ_recipA());
bin_to_d[j * settings.GetQBinCount() + i] = 2.0f * static_cast<float>(M_PI) / bin_to_q[j * settings.GetQBinCount() + i];
bin_to_2theta[j * settings.GetQBinCount() + i] = 2.0f * asinf(bin_to_q[i] * wavelength / (4.0f * static_cast<float>(M_PI))) * 180.0f /
static_cast<float>(M_PI);
bin_to_phi[j * settings.GetQBinCount() + i] = static_cast<float>(j) * 360.0f / static_cast<float>(settings.GetAzimuthalBinCount());
}
}
}
const std::vector<float> &AzimuthalIntegrationMapping::Corrections() const {
return corrections;
}
const std::vector<float> &AzimuthalIntegrationMapping::Resolution() const {
return pixel_resolution;
}
const AzimuthalIntegrationSettings &AzimuthalIntegrationMapping::Settings() const {
return settings;
}
size_t AzimuthalIntegrationMapping::GetWidth() const {
return width;
}
size_t AzimuthalIntegrationMapping::GetHeight() const {
return height;
}
int32_t AzimuthalIntegrationMapping::GetAzimuthalBinCount() const {
return settings.GetAzimuthalBinCount();
}
int32_t AzimuthalIntegrationMapping::GetQBinCount() const {
return settings.GetQBinCount();
}
size_t AzimuthalIntegrationMapping::GetNThreads() const {
return nthreads;
}