Filip Leonarski
8b356a7001
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This is an UNSTABLE release. * Fixes in CI pipeline * jfjoch_broker: Remove PNG preview, no dependency on libpng * jfjoch_writer: Fix UTC timestamp being generated wrong (mix between milli- and microseconds) * jfjoch_viewer: Show data collection time in dataset tooltip * jfjoch_viewer: Allow to choose the calibrant (presets for LaB6 and silver behenate) * jfjoch_viewer: Auto foreground value * Use external libjpeg-turbo and libtiff: simpler build stack, these are built and linked statically in automated Docker builds * Remove OpenBLAS dependency Reviewed-on: #1 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
65 lines
2.2 KiB
C++
65 lines
2.2 KiB
C++
// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#ifndef JFJOCH_JFJOCHREADERIMAGE_H
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#define JFJOCH_JFJOCHREADERIMAGE_H
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#include <vector>
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#include <unordered_set>
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#include <map>
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#include <mutex>
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#include "JFJochReaderDataset.h"
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#include "../common/CrystalLattice.h"
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constexpr static int32_t GAP_PXL_VALUE = INT32_MIN + 1;
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constexpr static int32_t ERROR_PXL_VALUE = INT32_MIN;
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constexpr static int32_t SATURATED_PXL_VALUE = INT32_MAX;
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class JFJochReaderImage {
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std::shared_ptr<const JFJochReaderDataset> dataset;
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std::vector<int32_t> image; // Image in the reader must be 32-bit signed, uncompressed
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DataMessage message;
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std::unordered_set<int64_t> saturated_pixel;
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std::unordered_set<int64_t> error_pixel;
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std::vector<std::pair<int32_t, int32_t>> valid_pixel;
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std::optional<ROIMessage> roi;
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mutable std::mutex roi_mutex;
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constexpr static float auto_foreground_range = 0.001f;
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int32_t auto_foreground;
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void CalcAutoContrast();
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template <class T>
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void ProcessInputImage(const void* image, size_t npixel, int64_t sat_value, int64_t special_value);
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void ProcessInputImage(const CompressedImage& image);
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public:
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JFJochReaderImage(const DataMessage &msg, const std::shared_ptr<const JFJochReaderDataset> &dataset);
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JFJochReaderImage(const JFJochReaderImage &other);
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const DataMessage &ImageData() const;
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DataMessage &ImageData();
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const std::vector<int32_t> &Image() const;
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const std::unordered_set<int64_t> &SaturatedPixels() const;
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const std::unordered_set<int64_t> &ErrorPixels() const;
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const std::vector<std::pair<int32_t, int32_t>> &ValidPixels() const;
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const JFJochReaderDataset &Dataset() const;
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const std::optional<ROIMessage> &GetROI() const;
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void AddImage(const JFJochReaderImage& other);
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std::vector<float> GetAzInt1D() const;
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std::vector<float> GetAzInt1D_BinToQ() const;
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// Functions that change the content
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void CalcROI(const ROIElement *input);
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std::shared_ptr<JFJochReaderDataset> CreateMutableDataset();
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int32_t GetAutoContrastValue() const;
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};
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#endif //JFJOCH_JFJOCHREADERIMAGE_H
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