leonarski_f 36a082c2f8 Merge branch 'worktree-agent-aa55c81220288558b' into grid-scan-integration ...

# Conflicts:
#	common/ScanResultGenerator.cpp
#	docs/CBOR.md
#	docs/HDF5.md
#	frame_serialize/CBORStream2Deserializer.cpp
#	frame_serialize/CBORStream2Serializer.cpp
#	writer/HDF5DataFilePluginMX.cpp
#	writer/HDF5DataFilePluginMX.h
#	writer/HDF5NXmx.cpp

2026-09-08 07:54:46 +02:00

..

azint

v1.0.0.rc-162 (#72)

2026-08-25 08:21:39 +02:00

beam_stop

v1.0.0.rc-162 (#72)

2026-08-25 08:21:39 +02:00

bragg_integration

Revert "integration: the background is fitted over the ring that survives, not averaged over it"

2026-09-07 16:30:22 +02:00

bragg_prediction

integration: the flight path between the sample and the detector is corrected for, and named

2026-09-05 17:55:43 +02:00

dark_mask_analysis

v1.0.0-rc.148 (#58)

2026-06-08 08:30:35 +02:00

geom_refinement

merge: bridge a rocking event by an angle rather than by a frame count

2026-09-04 10:09:08 +02:00

grid_scan_analysis

grid scan: a crystal is grown out of its seeds, so one weak grid point no longer splits it

2026-09-08 07:34:36 +02:00

image_preprocessing

v1.0.0-rc.166 (#76)

2026-09-02 21:17:31 +02:00

indexing

rugnux: a cell given with -C is matched in any equivalent description

2026-09-06 20:26:38 +02:00

lattice_search

symmetry: a metric two-fold the lattice search refused is asked of the intensities

2026-09-06 07:21:41 +02:00

roi

v1.0.0.rc-162 (#72)

2026-08-25 08:21:39 +02:00

rotation_indexer

rotation indexing: drive the winning candidate to the fit's fixed point

2026-09-03 18:54:53 +02:00

scale_merge

symmetry: absence evidence overrides the violation count, one zone at a time

2026-09-06 20:26:23 +02:00

spot_finding

image analysis: two per-image detection scores say whether there is protein and whether there is ice

2026-09-07 23:59:46 +02:00

CMakeLists.txt

Merge branch 'worktree-agent-aa55c81220288558b' into worktree-agent-ab3a3e173261a95d8

2026-09-08 00:01:07 +02:00

IceScore.cpp

image analysis: the ice score takes the pipeline's own band width, and the ice quantities are named for what kind of number they are

2026-09-08 07:19:03 +02:00

IceScore.h

image analysis: the ice score takes the pipeline's own band width, and the ice quantities are named for what kind of number they are

2026-09-08 07:19:03 +02:00

IndexAndRefine.cpp

spindle: the severity no longer rides on the indexing seed or on which indexer is configured

2026-09-04 10:59:05 +02:00

IndexAndRefine.h

v1.0.0-rc.166 (#76)

2026-09-02 21:17:31 +02:00

IntegrationOutcome.h

merge: bridge a rocking event by an angle rather than by a frame count

2026-09-04 10:09:08 +02:00

LoadFCalcFromMtz.cpp

v1.0.0-rc.160 (#70)

2026-07-19 09:39:28 +02:00

LoadFCalcFromMtz.h

v1.0.0-rc.159 (#69)

2026-07-13 13:54:03 +02:00

MXAnalysisAfterFPGA.cpp

v1.0.0-rc.156 (#66)

2026-07-03 19:18:56 +02:00

MXAnalysisAfterFPGA.h

v1.0.0-rc.156 (#66)

2026-07-03 19:18:56 +02:00

MXAnalysisWithoutFPGA.cpp

image analysis: the ice score takes the pipeline's own band width, and the ice quantities are named for what kind of number they are

2026-09-08 07:19:03 +02:00

MXAnalysisWithoutFPGA.h

v1.0.0-rc.164 (#74)

2026-08-26 22:47:00 +02:00

SensorAbsorption.h

integration: the flight path between the sample and the detector is corrected for, and named

2026-09-05 17:55:43 +02:00

UpdateReflectionResolution.cpp

integration: the flight path between the sample and the detector is corrected for, and named

2026-09-05 17:55:43 +02:00

UpdateReflectionResolution.h

v1.0.0-rc.153 (#63)

2026-06-23 20:29:49 +02:00

WriteReflections.cpp

integration: the flight path between the sample and the detector is corrected for, and named

2026-09-05 17:55:43 +02:00

WriteReflections.h

rugnux: the unmerged MTZ carries the sensor efficiency in its own column, not inside LP

2026-09-05 14:29:45 +02:00