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Jungfraujoch/common/CrystalLattice.h
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v1.0.0-rc.135 (#44)
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.

* Multiple small bug fixes scattered across the whole code base. (detected with GPT-5.4)
* jfjoch_viewer: Improve image render performance

Reviewed-on: #44
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>
2026-04-16 11:59:59 +02:00

44 lines
1.5 KiB
C++

// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only
#ifndef JUNGFRAUJOCH_CRYSTALLATTICE_H
#define JUNGFRAUJOCH_CRYSTALLATTICE_H
#include "../symmetry/gemmi/math.hpp"
#include <vector>
#include <array>
#include "Coord.h"
#include "UnitCell.h"
#include "../symmetry/gemmi/symmetry.hpp"
class CrystalLattice {
Coord vec[3];
void FixHandedness();
public:
void ReorderABEqual();
void ReorderMonoclinic();
CrystalLattice() = default;
explicit CrystalLattice(const UnitCell &cell);
explicit CrystalLattice(const std::vector<float>& input);
CrystalLattice(float a, float b, float c, float alpha, float beta, float gamma);
CrystalLattice(const Coord &a, const Coord &b, const Coord &c);
[[nodiscard]] float CalcVolume() const;
[[nodiscard]] const Coord &Vec0() const;
[[nodiscard]] const Coord &Vec1() const;
[[nodiscard]] const Coord &Vec2() const;
[[nodiscard]] Coord Astar() const;
[[nodiscard]] Coord Bstar() const;
[[nodiscard]] Coord Cstar() const;
[[nodiscard]] UnitCell GetUnitCell() const;
[[nodiscard]] std::vector<float> GetVector() const;
CrystalLattice FromPrimitive(char centering) const;
CrystalLattice ToPrimitive(char centering) const;
CrystalLattice Multiply(const RotMatrix &input) const;
CrystalLattice Multiply(const gemmi::Mat33 &input) const;
void Sort();
void Regularize(const gemmi::CrystalSystem &input);
};
#endif //JUNGFRAUJOCH_CRYSTALLATTICE_H