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Jungfraujoch/tests/xds/XDS.INP
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v1.0.0-rc.134 (#43)
This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.

* jfjoch_broker: Add better locking for detector object - should help, when detector initialization takes too long
* jfjoch_writer: Enable writing single, integrated HDF5 file with both data and metadata
* XDS plugin: Add generation of Jungfraujoch plugin for XDS
* CI: Add tests with XDS and DIALS (`xia2.ssx`)

Reviewed-on: #43
2026-04-09 13:30:47 +02:00

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!Settings for EIGER16M @ X06SA SLS
!job control
JOB=XYCORR INIT COLSPOT IDXREF DEFPIX INTEGRATE CORRECT
MAXIMUM_NUMBER_OF_JOBS=1
MAXIMUM_NUMBER_OF_PROCESSORS=1
! for this experiment:
ORGX= 1097
ORGY= 1130
DETECTOR_DISTANCE= 75
OSCILLATION_RANGE= 0.088
X-RAY_WAVELENGTH= 1.0
NAME_TEMPLATE_OF_DATA_FRAMES=writing_test_??????.h5
DATA_RANGE= 1 25
!DATA_RANGE_FIXED_SCALE_FACTOR= 1900 6000 1.0
SPOT_RANGE= 1 25
!BACKGROUND_RANGE= 1 11
!REFERENCE_DATA_SET=
SPACE_GROUP_NUMBER=96
UNIT_CELL_CONSTANTS= 78.95 78.95 36.91 90.000 90.000 90.000
!REIDX= 0 0 -1 0 0 -1 0 0 -1 0 0 0
REFINE(IDXREF)=BEAM AXIS ORIENTATION POSITION !CELL
REFINE(INTEGRATE)=POSITION BEAM ORIENTATION CELL AXIS
REFINE(CORRECT)=POSITION BEAM ORIENTATION CELL AXIS
FRIEDEL'S_LAW=FALSE
STRICT_ABSORPTION_CORRECTION=FALSE ! but read Tips_and_Tricks in XDSwiki
! parameters with changes wrt default values:
TRUSTED_REGION=0.00 1.21
VALUE_RANGE_FOR_TRUSTED_DETECTOR_PIXELS=4000. 30000.
!MINIMUM_ZETA=0.05
CORRECTIONS=DECAY MODULATION ABSORP !default value
INCLUDE_RESOLUTION_RANGE=50 0.0
! parameters specifically for this detector and beamline:
DETECTOR=EIGER NX=2068 NY=2164 QX=0.075 QY=0.075 !EIGER 16M
! Defines path to the Dectris neggia library (to use H5ToXds comment this line out)
LIB=../../build/xds-plugin/libjfjoch_xds_plugin.so
MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD=30000
DIRECTION_OF_DETECTOR_X-AXIS=1 0 0
DIRECTION_OF_DETECTOR_Y-AXIS=0 1 0
INCIDENT_BEAM_DIRECTION=0 0 1
ROTATION_AXIS=1 0 0
FRACTION_OF_POLARIZATION=0.99
POLARIZATION_PLANE_NORMAL=0 1 0
SENSOR_THICKNESS=0.32
!EXCLUSION OF HORIZONTAL DEAD AREAS OF THE EIGER 16M DETECTOR + ONE PIXEL ON EACH SIDE
! UNTRUSTED_RECTANGLE= 0 4151 513 553
! UNTRUSTED_RECTANGLE= 0 4151 1064 1104
! UNTRUSTED_RECTANGLE= 0 4151 1615 1655
! UNTRUSTED_RECTANGLE= 0 4151 2166 2206
! UNTRUSTED_RECTANGLE= 0 4151 2717 2757
! UNTRUSTED_RECTANGLE= 0 4151 3268 3308
! UNTRUSTED_RECTANGLE= 0 4151 3819 3859
!EXCLUSION OF VERTICAL DEAD AREAS OF THE EIGER 16M DETECTOR + ONE PIXEL ON EACH SIDE
! UNTRUSTED_RECTANGLE= 1029 1042 0 4372
! UNTRUSTED_RECTANGLE= 2069 2082 0 4372
! UNTRUSTED_RECTANGLE= 3109 3122 0 4372
UNTRUSTED_RECTANGLE=1036 2017 1082 1637
NUMBER_OF_PROFILE_GRID_POINTS_ALONG_ALPHA/BETA=21 !used by: INTEGRATE
!MINIMUM_NUMBER_OF_PIXELS_IN_A_SPOT=
MINIMUM_FRACTION_OF_INDEXED_SPOTS=0.2
SEPMIN=4 CLUSTER_RADIUS=2
SIGNAL_PIXEL=6