One page listing the CUDA engines by pipeline stage - decode and preprocessing, per-image analysis
(azimuthal and ROI integration, spot finders, extractor), pre-scan accumulators, indexing,
prediction and integration, the scaling engine, model validation and molecular replacement - each
with what it computes, how closely it agrees with the CPU, and a link to the section describing the
method. Added to the toctree after CPU_DATA_ANALYSIS_DECISIONS.
Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01EizBKhTqrAYago9KJG3dA3