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leonarski_fandClaude Opus 4.8 f0dc61ef58 rugnux: write refined geometry (beam, tilt, axis) to _process.h5 
The master-file geometry is written from the StartMessage at file open, before
indexing/refinement - the file is streamed per image, so it cannot wait for the
refined values. rugnux therefore stored the nominal beam centre / detector tilt /
rotation axis, not the geometry its own refinement found (jfjoch_broker, by
contrast, deliberately keeps the user-provided values).

Add optional refined geometry to EndMessage; at finalization the writer overwrites
the beam_center_x/y, PONI rot1/2/3 and rotation-axis datasets in place with these.
The broker leaves them empty, so its output is unchanged.

For EcwtCQ244-E3 the _process.h5 now reports the refined beam 761.6/847.7 (nominal
764/850, matching XDS's 760.2) plus the refined tilt and rotation axis.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-07-10 14:17:56 +02:00
..
ADUHistogram.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ADUHistogram.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
AutoIncrVector.h
v1.0.0-rc.139 (#49)
2026-04-29 09:50:50 +02:00
AzimuthalIntegrationMapping.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
AzimuthalIntegrationMapping.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
AzimuthalIntegrationProfile.cpp
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
AzimuthalIntegrationProfile.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
AzimuthalIntegrationSettings.cpp
v1.0.0-rc.152 (#62)
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AzimuthalIntegrationSettings.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
BraggIntegrationSettings.cpp
v1.0.0-rc.155 (#65)
2026-06-25 22:01:48 +02:00
BraggIntegrationSettings.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
BrokerStatus.h
v1.0.0-rc.129 (#36)
2026-03-05 22:13:12 +01:00
CheckPath.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
CMakeLists.txt
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ColorScale.cpp
v1.0.0-rc.124 (#31)
2026-02-01 13:29:33 +01:00
ColorScale.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
CompressedImage.cpp
v1.0.0-rc.40
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CompressedImage.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
Coord.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
Coord.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
CorrelationCoefficient.cpp
v1.0.0-rc.146 (#56)
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CorrelationCoefficient.h
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
CrystalLattice.cpp
v1.0.0-rc.153 (#63)
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CrystalLattice.h
v1.0.0-rc.148 (#58)
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CUDAWrapper.cpp
v1.0.0-rc.153 (#63)
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CUDAWrapper.cu
v1.0.0-rc.153 (#63)
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CUDAWrapper.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
DarkMaskSettings.cpp
v1.0.0-rc.139 (#49)
2026-04-29 09:50:50 +02:00
DarkMaskSettings.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
DatasetSettings.cpp
v1.0.0-rc.156 (#66)
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DatasetSettings.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
Definitions.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
DetectorGeometry.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
DetectorGeometryFixed.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
DetectorGeometryFixed.h
v1.0.0-rc.148 (#58)
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DetectorGeometryModular.cpp
v1.0.0-rc.135 (#44)
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DetectorGeometryModular.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
DetectorModuleGeometry.cpp
v1.0.0-rc.103 (#8)
2025-11-19 09:40:50 +01:00
DetectorModuleGeometry.h
v1.0.0-rc.148 (#58)
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DetectorSettings.cpp
v1.0.0-rc.139 (#49)
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DetectorSettings.h
v1.0.0-rc.148 (#58)
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DetectorSetup.cpp
v1.0.0-rc.153 (#63)
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DetectorSetup.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
DiffractionExperiment.cpp
v1.0.0-rc.156 (#66)
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DiffractionExperiment.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
DiffractionGeometry.cpp
v1.0.0-rc.153 (#63)
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DiffractionGeometry.h
v1.0.0-rc.148 (#58)
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DiffractionSpot.cpp
v1.0.0-rc.148 (#58)
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DiffractionSpot.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
FileWriterSettings.cpp
v1.0.0-rc.135 (#44)
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FileWriterSettings.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
GitInfo.cpp.in
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
GitInfo.h
v1.0.0-rc.148 (#58)
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GoniometerAxis.cpp
v1.0.0-rc.153 (#63)
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GoniometerAxis.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
GridScanSettings.cpp
v1.0.0-rc.104 (#9)
2025-11-19 17:28:10 +01:00
GridScanSettings.h
v1.0.0-rc.148 (#58)
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Histogram.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
hkl_key.h
v1.0.0-rc.124 (#31)
2026-02-01 13:29:33 +01:00
ImageBuffer.cpp
v1.0.0-rc.153 (#63)
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ImageBuffer.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ImageFormatSettings.cpp
v1.0.0-rc.139 (#49)
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ImageFormatSettings.h
v1.0.0-rc.148 (#58)
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IndexingSettings.cpp
v1.0.0-rc.148 (#58)
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IndexingSettings.h
v1.0.0-rc.155 (#65)
2026-06-25 22:01:48 +02:00
InstrumentMetadata.cpp
version 1.0.0-rc.27
2024-12-02 21:17:14 +01:00
InstrumentMetadata.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
JFJochException.h
Fix acquisition error-handling and rugnux CLI issues from branch review
2026-07-08 15:48:01 +02:00
JFJochMath.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
JFJochMessages.h
rugnux: write refined geometry (beam, tilt, axis) to _process.h5
2026-07-10 14:17:56 +02:00
JFJochReceiverPlots.cpp
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
JFJochReceiverPlots.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
JfjochTCP.h
v1.0.0-rc.153 (#63)
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Logger.cpp
v1.0.0-rc.82
2025-09-22 19:49:39 +02:00
Logger.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ModuleSummation.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
ModuleSummation.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
MovingAverage.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
MovingAverage.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
MultiLinePlot.cpp
v1.0.0-rc.40
2025-05-28 18:49:27 +02:00
MultiLinePlot.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
NetworkAddressConvert.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
NetworkAddressConvert.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
PixelMask.cpp
v1.0.0-rc.153 (#63)
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PixelMask.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
Plot.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
print_license.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
RawToConvertedGeometry.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
RawToConvertedGeometryCore.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
Reflection.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
ResolutionShells.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
ResolutionShells.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ROIAzimuthal.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIAzimuthal.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIBox.cpp
v1.0.0-rc.153 (#63)
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ROIBox.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROICircle.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROICircle.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIDefinition.cpp
version 1.0.0-rc.29
2024-12-08 13:26:13 +01:00
ROIDefinition.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ROIElement.cpp
v1.0.0-rc.153 (#63)
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ROIElement.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIMap.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIMap.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ScalingSettings.cpp
rugnux: automatic CC1/2-logistic high-resolution cutoff
2026-07-09 17:34:49 +02:00
ScalingSettings.h
rugnux: automatic CC1/2-logistic high-resolution cutoff
2026-07-09 17:34:49 +02:00
ScanResult.cpp
v1.0.0-rc.44
2025-06-15 17:46:46 +02:00
ScanResult.h
v1.0.0-rc.156 (#66)
2026-07-03 19:18:56 +02:00
ScanResultGenerator.cpp
Drop uncollected placeholder rows from scan_result
2026-07-08 20:25:20 +02:00
ScanResultGenerator.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
SpotToSave.cpp
v1.0.0-rc.72
2025-09-08 20:28:59 +02:00
SpotToSave.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
StatusVector.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
StatusVector.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ThreadSafeFIFO.h
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
time_utc.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
TopPixels.cpp
v1.0.0-rc.121 (#28)
2025-12-12 21:24:20 +01:00
TopPixels.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
UnitCell.cpp
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
UnitCell.h
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
XrayFluorescenceSpectrum.cpp
v1.0.0-rc.81
2025-09-21 19:27:51 +02:00
XrayFluorescenceSpectrum.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ZeroCopyReturnValue.cpp
v1.0.0-rc.128 (#35)
2026-03-03 22:24:44 +01:00
ZeroCopyReturnValue.h
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
ZMQWrappers.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
ZMQWrappers.h
v1.0.0-rc.148 (#58)
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