56 lines
2.2 KiB
C++
56 lines
2.2 KiB
C++
// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#include "HDF5DataFilePluginAzInt.h"
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#define RESERVE_IMAGES 1000
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HDF5DataFilePluginAzInt::HDF5DataFilePluginAzInt(const StartMessage &message) :
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az_int_bin_to_q(message.az_int_bin_to_q),
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az_int_bin_to_two_theta(message.az_int_bin_to_two_theta),
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az_int_bin_to_phi(message.az_int_bin_to_phi),
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azimuthal_bins(message.az_int_phi_bin_count.value_or(1)),
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q_bins(message.az_int_q_bin_count.value_or(1)){
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}
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void HDF5DataFilePluginAzInt::OpenFile(HDF5File &data_file, const DataMessage &msg) {
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if (az_int_bin_to_q.empty() || q_bins <= 0 || azimuthal_bins <= 0)
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return;
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std::vector<hsize_t> dim = {azimuthal_bins, q_bins};
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HDF5Group(data_file, "/entry/azint").NXClass("NXcollection");
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data_file.SaveVector("/entry/azint/bin_to_q", az_int_bin_to_q, dim);
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if (!az_int_bin_to_two_theta.empty())
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data_file.SaveVector("/entry/azint/bin_to_two_theta", az_int_bin_to_two_theta, dim);
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if (!az_int_bin_to_phi.empty())
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data_file.SaveVector("/entry/azint/bin_to_phi", az_int_bin_to_phi, dim);
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max_image_number = msg.number;
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HDF5DataType data_type(0.0f);
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HDF5DataSpace data_space = HDF5DataSpace({max_image_number+1, azimuthal_bins, q_bins},
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{H5S_UNLIMITED, azimuthal_bins, q_bins});
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HDF5Dcpl dcpl;
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dcpl.SetChunking({1, azimuthal_bins, q_bins});
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dataset = std::make_unique<HDF5DataSet>(data_file, "/entry/azint/image", data_type, data_space, dcpl);
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}
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void HDF5DataFilePluginAzInt::Write(const DataMessage &msg, uint64_t image_number) {
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if (az_int_bin_to_q.empty() || q_bins <= 0 || azimuthal_bins <= 0)
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return;
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if (static_cast<int64_t>(image_number) > max_image_number) {
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max_image_number = image_number;
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dataset->SetExtent({max_image_number+1, azimuthal_bins, q_bins});
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}
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if (!msg.az_int_profile.empty() && (msg.az_int_profile.size() == az_int_bin_to_q.size())) {
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dataset->SetExtent({max_image_number+1, azimuthal_bins, q_bins});
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dataset->WriteVec(msg.az_int_profile, {image_number, 0, 0}, {1, azimuthal_bins, q_bins});
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}
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}
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void HDF5DataFilePluginAzInt::WriteFinal(HDF5File &data_file) {
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}
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