A single per-image ice_ring_score - the strongest hexagonal-ice ring band/shoulder intensity ratio from the azimuthal profile (1 = no ice) - computed in the CPU and FPGA analysis paths and the offline azint worker, then plumbed through every layer: DataMessage/EndMessage, CBOR (frame_serialize), HDF5 (/entry/MX/iceRingScore), ScanResult, receiver plots (PlotType::IceRingScore), the OpenAPI spec (plot_type + scan_result schema, with regenerated broker/gen and frontend client) and OpenAPIConvert, the reader + Qt viewer, and the React frontend plot. Documented in docs/CBOR.md, docs/HDF5.md and docs/CPU_DATA_ANALYSIS.md, with the general "add a per-image quantity" recipe added to CLAUDE.md. Verified in HDF5: lysoC (weak ice) mean 1.23, EP_cs_01-17 (heavy ice) mean 1.67 / max 2.23. This is a monitoring quantity - it does not gate scaling (which already excludes all ice rings) or merging (handled by the CC1/2 ring mask). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
134 lines
7.3 KiB
TypeScript
134 lines
7.3 KiB
TypeScript
import {memo, useState} from 'react';
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import Paper from '@mui/material/Paper';
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import {Box, Checkbox, FormControlLabel, Grid} from "@mui/material";
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import DataProcessingPlot from "./DataProcessingPlot";
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import Toolbar from "@mui/material/Toolbar";
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import MenuItem from "@mui/material/MenuItem";
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import FormControl from "@mui/material/FormControl";
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import Select, {SelectChangeEvent} from "@mui/material/Select";
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import {azint_unit, plot_type} from "../client";
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type MyProps = {
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type: plot_type,
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height: number
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}
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function DataProcessingPlots({type: initialType, height}: MyProps) {
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const [type, setType] = useState<plot_type>(initialType);
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const [binning, setBinning] = useState("0");
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const [tab, setTab] = useState<String>(initialType);
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const [angleUnits, setAngleUnits] = useState(true);
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const [azintUnit, setAzintUnit] = useState<azint_unit>(azint_unit.Q_RECIP_A);
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const plotTypeChange = (event : SelectChangeEvent<String>) => {
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let val = String(event.target.value).toString();
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setTab(val);
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setType(val as plot_type);
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};
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const handleChange = (event : SelectChangeEvent<String>) => {
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setBinning(String(event.target.value).toString());
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};
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return <Paper style={{textAlign: 'center'}} sx={{ height: height, width: "100%" }}>
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<Toolbar>
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<Grid container sx={{ minWidth: 500 }} >
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<FormControl variant="standard" sx={{ m: 1, minWidth: 500 }}>
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<Select
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value={tab}
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onChange={plotTypeChange}
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label="Plot category"
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sx={{fontWeight: "bold"}}
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>
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<MenuItem value={plot_type.INDEXING_RATE}>Indexing rate</MenuItem>
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<MenuItem value={plot_type.INDEXING_UNIT_CELL_LENGTH}>Indexing unit cell (length)</MenuItem>
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<MenuItem value={plot_type.INDEXING_UNIT_CELL_ANGLE}>Indexing unit cell (angle)</MenuItem>
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<MenuItem value={plot_type.SPOT_COUNT}>Spot count</MenuItem>
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<MenuItem value={plot_type.SPOT_COUNT_LOW_RES}>Spot count low res.</MenuItem>
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<MenuItem value={plot_type.SPOT_COUNT_INDEXED}>Spot count indexed</MenuItem>
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<MenuItem value={plot_type.SPOT_COUNT_ICE}>Spot count ice ring</MenuItem>
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<MenuItem value={plot_type.ICE_RING_SCORE}>Ice ring score</MenuItem>
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<MenuItem value={plot_type.AZINT}>Azimuthal integration profile</MenuItem>
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<MenuItem value={plot_type.AZINT_1D}>Azimuthal integration profile (1D)</MenuItem>
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<MenuItem value={plot_type.BKG_ESTIMATE}>Background estimate</MenuItem>
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<MenuItem value={plot_type.RESOLUTION_ESTIMATE}>Diffraction resolution estimate</MenuItem>
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<MenuItem value={plot_type.ROI_SUM}>ROI area sum</MenuItem>
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<MenuItem value={plot_type.ROI_MEAN}>ROI area mean</MenuItem>
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<MenuItem value={plot_type.ROI_WEIGHTED_X}>ROI area weighted X position</MenuItem>
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<MenuItem value={plot_type.ROI_WEIGHTED_Y}>ROI area weighted Y position</MenuItem>
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<MenuItem value={plot_type.ROI_MAX_COUNT}>ROI area max count</MenuItem>
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<MenuItem value={plot_type.ERROR_PIXELS}>Error pixels</MenuItem>
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<MenuItem value={plot_type.SATURATED_PIXELS}>Saturated pixels</MenuItem>
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<MenuItem value={plot_type.STRONG_PIXELS}>Strong pixels (for spot finding)</MenuItem>
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<MenuItem value={plot_type.MAX_PIXEL_VALUE}>Maximum pixel value (excl. overloads)</MenuItem>
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<MenuItem value={plot_type.PROFILE_RADIUS}>Profile radius</MenuItem>
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<MenuItem value={plot_type.B_FACTOR}>Wilson B-factor</MenuItem>
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<MenuItem value={plot_type.BEAM_CENTER_X}>Beam center X (post-indexing geometry refinement)</MenuItem>
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<MenuItem value={plot_type.BEAM_CENTER_Y}>Beam center Y (post-indexing geometry refinement)</MenuItem>
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<MenuItem value={plot_type.INDEXING_LATTICE_COUNT}>Indexed lattice count</MenuItem>
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<MenuItem value={plot_type.INTEGRATED_REFLECTIONS}>Integrated reflections</MenuItem>
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<MenuItem value={plot_type.IMAGE_COLLECTION_EFFICIENCY}>Image collection efficiency</MenuItem>
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<MenuItem value={plot_type.COMPRESSION_RATIO}>Compression ratio</MenuItem>
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<MenuItem value={plot_type.PROCESSING_TIME}> Processing time</MenuItem>
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<MenuItem value={plot_type.RECEIVER_DELAY}>Receiver delay (internal debugging)</MenuItem>
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<MenuItem value={plot_type.RECEIVER_FREE_SEND_BUF}>Receiver free send buffers (internal debugging)</MenuItem>
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</Select>
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</FormControl>
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</Grid>
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<Grid container justifyContent="flex-end">
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<FormControl variant="standard" sx={{ m: 1, minWidth: 120 }}>
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<FormControlLabel
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control={
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<Checkbox
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checked={angleUnits}
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onChange={(e) => setAngleUnits(e.target.checked)}
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/>
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}
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label="X-axis exp. units"
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/></FormControl>
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<FormControl variant="standard" sx={{ m: 1, minWidth: 120 }}>
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<FormControlLabel
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control={
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<Checkbox
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checked={azintUnit == azint_unit.TWO_THETA_DEG}
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onChange={(e) => setAzintUnit(
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e.target.checked ? azint_unit.TWO_THETA_DEG : azint_unit.Q_RECIP_A
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)}
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/>
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}
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label="2θ (az. int.)"
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/>
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</FormControl>
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<FormControl variant="standard" sx={{ m: 1, minWidth: 120 }}>
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<Select
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value={binning}
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onChange={handleChange}
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label="Binning"
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>
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<MenuItem value={0}>
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<em>Auto binning</em>
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</MenuItem>
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<MenuItem value={1}>1 image</MenuItem>
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<MenuItem value={10}>10 images</MenuItem>
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<MenuItem value={100}>100 images</MenuItem>
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<MenuItem value={500}>500 images</MenuItem>
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<MenuItem value={1000}>1000 images</MenuItem>
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<MenuItem value={5000}>5000 images</MenuItem>
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<MenuItem value={10000}>10000 images</MenuItem>
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</Select>
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</FormControl>
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</Grid>
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</Toolbar>
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<Box sx={{width:"95%", height: height - 150}} >
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<DataProcessingPlot type={type} binning={Number(binning)} angle={angleUnits}
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azint={azintUnit}/>
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</Box>
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</Paper>
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}
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export default memo(DataProcessingPlots);
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