leonarski_f
afbe844b20
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* Rugnux: Processes serial crystallography data from XFELs - SACLA (MPCCD), PAL-XFEL and European XFEL (CXI), LCLS (XTC) and SwissFEL Alvra (JUNGFRAU with a CrystFEL module geometry) - with several files or Jungfraujoch master files merged in one run (`rugnux *_master.h5`). * Rugnux: Stills processing takes a known unit cell and space group as a starting point, finds the beam centre (and, with a cell, the detector distance) from the images, detects the saturation level in other facilities' files and refines the placement of individual detector panels. * Rugnux: The stills report gives R_split and CC1/2 from frame half-sets, comparable with CrystFEL. * jfjoch_viewer: Opens the same XFEL file formats. * Validation: A stills battery checks Rugnux against deposited structures from SACLA, PAL-XFEL, LCLS, European XFEL and SwissFEL. * Rugnux: More reliable convergence of rotation scaling, and live molecular replacement starts as soon as the model is uploaded. * jfjoch_broker: Initialize clears the previous dataset's bearer tokens, image buffer and live Rugnux status, and a slow CUDA JIT cache is reported at start. Reviewed-on: #88 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
1.1 KiB
1.1 KiB
RugnuxLiveStep
Properties
| Name | Type | Description | Notes |
|---|---|---|---|
| title | str | ||
| started_s | float | Start of the step, since the first image (negative if before it) | |
| duration_s | float | Set once the next step starts or the run ends | [optional] |
| notes | List[str] | What the step found (e.g. lattice, space group) |
Example
from jfjoch_client.models.rugnux_live_step import RugnuxLiveStep
# TODO update the JSON string below
json = "{}"
# create an instance of RugnuxLiveStep from a JSON string
rugnux_live_step_instance = RugnuxLiveStep.from_json(json)
# print the JSON string representation of the object
print(RugnuxLiveStep.to_json())
# convert the object into a dict
rugnux_live_step_dict = rugnux_live_step_instance.to_dict()
# create an instance of RugnuxLiveStep from a dict
rugnux_live_step_from_dict = RugnuxLiveStep.from_dict(rugnux_live_step_dict)