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leonarski_fandClaude Opus 5 beae384bb7
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scale/merge: what each stretch of a sweep costs the merged data, measured
The sweep-quality diagnostic says a range is weak; it cannot say whether that
weakness costs anything. A 60 degree stretch of poor diffraction and a radiation
damage tail look alike in scale and correlation, and on one dataset they measure
-0.0758 +- 0.0005 and -0.0019: one is 150 sigma of real harm, the other is
nothing once the corrections have done their work.

So measure it, per batch of the sweep, as the change in CC1/2 when that batch is
left out - Assmann, Brehm & Diederichs (2016) Acta Cryst. D72, 1071-1081. In the
sigma-tau form, so no half-set is drawn and nothing depends on a seed; against the
observed scatter of each reflection's own observations rather than the error
model's sigmas, which would invert the sign and make a bad batch read as added
precision; and on the 10 degree batch the damage monitor already uses, because a
single frame is far below what the statistic can resolve - the precision goes as
one over the root of the reflection count, and 0.1 degrees of rotation does not
have the reflections.

Report only. Nothing is dropped, no observation is weighted differently, and every
existing key of every dataset tested is unchanged to the digit. The disposition
column says merged for all of them; acting on it needs a frame attribution this
code does not yet have, since a full is currently labelled with its peak frame
rather than with the frames its partials came from.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_011GxZqDiFP3KqriBhNdcR56
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