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This is an UNSTABLE release. It includes many experimental features, as well as many AI generated fixes. We recommend using rc.152 for production use. * jfjoch_broker: Add EXPERIMENTAL pixelrefine mode for image processing * jfjoch_broker: Allow to load user mask from 8-bit and 16-bit TIFF files * jfjoch_broker: Add ROI calculation in non-FPGA workflow * jfjoch_broker: Fixes to TCP image pusher * jfjoch_broker: Remove NUMA bindings * jfjoch_broker: Improvements to indexing * jfjoch_broker: For PSI EIGER, trimming energies are taken from the detector configuration (now compulsory) instead of hardcoded values * jfjoch_writer: Save ROI definitions and the per-pixel ROI bitmap in the master file; azimuthal ROIs support phi (angular) sectors * jfjoch_viewer: Major redesign with dockable panels and saved layouts, plus on-canvas creation/move/resize of box, circle and azimuthal ROIs * jfjoch_viewer: Run jfjoch_process reprocessing jobs from inside the GUI and overlay per-run results Reviewed-on: #63
117 lines
4.2 KiB
C++
117 lines
4.2 KiB
C++
// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#include "JFJochReceiverTest.h"
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#include "JFJochReceiverService.h"
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#include "../image_pusher/ZMQStream2Pusher.h"
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#include "../image_pusher/TestImagePusher.h"
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#define STORAGE_CELL_FOR_TEST 11
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static JFCalibration GeneratePedestalCalibration(const DiffractionExperiment &x) {
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JFCalibration ret(x);
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std::vector<float> pedestal_g0( RAW_MODULE_SIZE), pedestal_g1(RAW_MODULE_SIZE), pedestal_g2(RAW_MODULE_SIZE);
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for (int s = 0; s < x.GetStorageCellNumber(); s++) {
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for (int m = 0; m < x.GetModulesNum(); m++) {
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for (int i = 0; i < RAW_MODULE_SIZE; i++) {
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pedestal_g0[i] = 3000 + 100 * s + 10 * m + i % 50;
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if (x.IsFixedGainG1())
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pedestal_g1[i] = 2500 + 100 * s + 10 * m + i % 50;
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else
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pedestal_g1[i] = 15000 - 100 * s + 10 * m + i % 50;
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pedestal_g2[i] = 14000 - 100 * s + 10 * m + i % 50;
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}
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ret.Pedestal(m, 0, s).LoadPedestal(pedestal_g0);
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ret.Pedestal(m, 1, s).LoadPedestal(pedestal_g1);
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ret.Pedestal(m, 2, s).LoadPedestal(pedestal_g2);
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}
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}
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return ret;
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}
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bool JFJochReceiverTest(JFJochReceiverOutput &output, Logger &logger,
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AcquisitionDeviceGroup &aq_devices,
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const DiffractionExperiment &x,
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const PixelMask &pixel_mask,
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uint16_t nthreads,
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size_t send_buf_size_MiB,
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bool quick_integrate) {
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std::vector<uint16_t> raw_expected_image(RAW_MODULE_SIZE * x.GetModulesNum());
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for (int i = 0; i < raw_expected_image.size(); i++)
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raw_expected_image[i] = i % 65536;
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return JFJochReceiverTest(output, logger, aq_devices, x, pixel_mask, raw_expected_image, nthreads,
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send_buf_size_MiB, quick_integrate);
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}
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bool JFJochReceiverTest(JFJochReceiverOutput &output, Logger &logger,
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AcquisitionDeviceGroup &aq_devices,
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const DiffractionExperiment &x,
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const PixelMask &pixel_mask,
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const std::vector<uint16_t> &raw_expected_image,
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uint16_t nthreads,
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size_t send_buf_size_MiB,
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bool quick_integrate) {
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std::vector<uint16_t> raw_expected_image_with_mask = raw_expected_image;
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if (x.IsApplyPixelMask()) {
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for (int i = 0; i < raw_expected_image_with_mask.size(); i++)
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if (pixel_mask.GetMaskRaw().at(i) != 0)
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raw_expected_image_with_mask[i] = UINT16_MAX;
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}
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JFCalibration calib = GeneratePedestalCalibration(x);
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int64_t image_number = x.GetImageNum() - 1;
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if (x.GetStorageCellNumber() > 1)
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image_number = STORAGE_CELL_FOR_TEST;
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if (image_number < 0)
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image_number = 0;
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TestImagePusher pusher(image_number);
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JFJochReceiverService service(aq_devices, logger, pusher, send_buf_size_MiB);
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service.NumThreads(nthreads);
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service.LoadInternalGeneratorImage(x, raw_expected_image, 0);
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service.Indexing(x.GetIndexingSettings());
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SpotFindingSettings settings = DiffractionExperiment::DefaultDataProcessingSettings();
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settings.signal_to_noise_threshold = 2.5;
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settings.photon_count_threshold = 5;
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settings.min_pix_per_spot = 1;
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settings.max_pix_per_spot = 200;
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settings.quick_integration = quick_integrate;
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service.SetSpotFindingSettings(settings);
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service.Start(x, pixel_mask, &calib);
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output = service.Stop();
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bool no_errors = true;
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if (x.GetImageNum() > 0) {
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no_errors = pusher.CheckImage(x, raw_expected_image_with_mask, calib, logger);
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if (output.efficiency != 1.0) {
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logger.Error("Not all frames were received");
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no_errors = false;
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}
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if (!pusher.CheckSequence()) {
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logger.Error("Wrong sequence of operations for pusher");
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no_errors = false;
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}
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if (pusher.GetCounter() != x.GetImageNum()) {
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logger.Error("Wrong frame number from pusher");
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no_errors = false;
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}
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}
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return no_errors;
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} |