// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute // SPDX-License-Identifier: GPL-3.0-only #include #include #include #include "JFJochTIFF.h" #include "../common/JFJochException.h" void WriteTIFF(TIFF *tiff, const CompressedImage& image) { if (tiff == nullptr) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFStreamOpen error"); std::vector buffer; image.GetUncompressed(buffer); TIFFSetField(tiff, TIFFTAG_IMAGEWIDTH, image.GetWidth()); // set the width of the image TIFFSetField(tiff, TIFFTAG_IMAGELENGTH, image.GetHeight()); // set the height of the image switch (image.GetMode()) { case CompressedImageMode::RGB: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 8); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 3); TIFFSetField(tiff, TIFFTAG_PHOTOMETRIC, PHOTOMETRIC_RGB); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_UINT); break; case CompressedImageMode::Int8: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 8); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_INT); break; case CompressedImageMode::Int16: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 16); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_INT); break; case CompressedImageMode::Int32: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 32); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_INT); break; case CompressedImageMode::Uint8: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 8); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_UINT); break; case CompressedImageMode::Uint16: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 16); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_UINT); break; case CompressedImageMode::Uint32: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 32); TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_UINT); break; case CompressedImageMode::Float16: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 16); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_IEEEFP); // Float format TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); break; case CompressedImageMode::Float32: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 32); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_IEEEFP); // Float format TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); break; case CompressedImageMode::Float64: TIFFSetField(tiff, TIFFTAG_BITSPERSAMPLE, 64); TIFFSetField(tiff, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_IEEEFP); // Float format TIFFSetField(tiff, TIFFTAG_SAMPLESPERPIXEL, 1); break; } TIFFSetField(tiff, TIFFTAG_PLANARCONFIG, PLANARCONFIG_CONTIG); TIFFSetField(tiff, TIFFTAG_ORIENTATION, ORIENTATION_TOPLEFT); TIFFSetField(tiff, TIFFTAG_COMPRESSION, COMPRESSION_NONE); // set compression to LZW TIFFSetField(tiff, TIFFTAG_ROWSPERSTRIP, image.GetHeight()); if (TIFFWriteEncodedStrip(tiff, 0, buffer.data(), image.GetUncompressedSize()) < 0) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFWriteEncodedStrip error"); } std::string WriteTIFFToString(const CompressedImage& image) { std::stringstream os; TIFF *tiff = TIFFStreamOpen("x", (std::ostream *) &os); WriteTIFF(tiff, image); TIFFClose(tiff); return os.str(); } void WriteTIFFToFile(const std::string &filename, const CompressedImage& image) { TIFF *tiff = TIFFOpen(filename.c_str(), "w"); WriteTIFF(tiff, image); TIFFClose(tiff); } CompressedImage ReadTIFF(const std::string &s, std::vector &buffer) { if (s.empty()) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "No TIFF file provided"); uint32_t rows_per_string = 0; uint16_t elem_size = 0; uint16_t format = 0; uint32_t cols = 0; uint32_t lines = 0; std::istringstream input_TIFF_stream(s); TIFF* tiff = TIFFStreamOpen("MemTIFF", &input_TIFF_stream); if (tiff == nullptr) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError,"Not a proper TIFF file"); TIFFGetField(tiff, TIFFTAG_IMAGEWIDTH, &cols); // get the width of the image TIFFGetField(tiff, TIFFTAG_IMAGELENGTH, &lines); // get the height of the image TIFFGetField(tiff, TIFFTAG_BITSPERSAMPLE, &elem_size); // get the size of the channels TIFFGetField(tiff, TIFFTAG_ROWSPERSTRIP, &rows_per_string); TIFFGetField(tiff, TIFFTAG_SAMPLEFORMAT, &format); if (cols * lines * elem_size <= 0) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError,"Size wrong"); if (cols * elem_size != TIFFScanlineSize(tiff)) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFScanlineSize mismatch"); buffer.resize(cols * lines * elem_size); for (int i = 0; i < lines; i++) { if (TIFFReadScanline(tiff, buffer.data() + i * cols * elem_size, i, 0) < 0) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFReadScanline error"); } TIFFClose(tiff); CompressedImageMode mode = CalcImageMode(elem_size / 8, (format == SAMPLEFORMAT_IEEEFP), (format == SAMPLEFORMAT_INT)); return CompressedImage(buffer, cols, lines, mode); } std::vector ReadTIFFFromString32(const std::string &s, uint32_t &cols, uint32_t &lines) { if (s.empty()) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "No TIFF file provided"); uint32_t rows_per_string = 0; std::vector ret; uint16_t elem_size; std::istringstream input_TIFF_stream(s); TIFF* tiff = TIFFStreamOpen("MemTIFF", &input_TIFF_stream); if (tiff == nullptr) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError,"Not a proper TIFF file"); TIFFGetField(tiff, TIFFTAG_IMAGEWIDTH, &cols); // get the width of the image TIFFGetField(tiff, TIFFTAG_IMAGELENGTH, &lines); // get the height of the image TIFFGetField(tiff, TIFFTAG_BITSPERSAMPLE, &elem_size); // get the size of the channels TIFFGetField(tiff, TIFFTAG_ROWSPERSTRIP, &rows_per_string); if (elem_size != 32) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "Only 32-bit format supported"); ret.resize(cols * lines); if (cols * sizeof(uint32_t) != TIFFScanlineSize(tiff)) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFScanlineSize mismatch"); for (int i = 0; i < lines; i++) { if (TIFFReadScanline(tiff, ret.data() + i * cols, i, 0) < 0) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFReadScanline error"); } TIFFClose(tiff); return ret; } std::vector ReadTIFFFromString16(const std::string &s, uint32_t &cols, uint32_t &lines) { if (s.empty()) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "No TIFF file provided"); uint32_t rows_per_string = 0; std::vector ret; uint16_t elem_size; std::istringstream input_TIFF_stream(s); TIFF* tiff = TIFFStreamOpen("MemTIFF", &input_TIFF_stream); if (tiff == nullptr) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFF format error"); TIFFGetField(tiff, TIFFTAG_IMAGEWIDTH, &cols); // get the width of the image TIFFGetField(tiff, TIFFTAG_IMAGELENGTH, &lines); // get the height of the image TIFFGetField(tiff, TIFFTAG_BITSPERSAMPLE, &elem_size); // get the size of the channels TIFFGetField(tiff, TIFFTAG_ROWSPERSTRIP, &rows_per_string); if (elem_size != 16) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "Only 16-bit format supported"); ret.resize(cols * lines); if (cols * sizeof(uint16_t) != TIFFScanlineSize(tiff)) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFScanlineSize mismatch"); for (int i = 0; i < lines; i++) { if (TIFFReadScanline(tiff, ret.data() + i * cols, i, 0) < 0) throw JFJochException(JFJochExceptionCategory::TIFFGeneratorError, "TIFFReadScanline error"); } TIFFClose(tiff); return ret; } void SupressTIFFErrors() { TIFFSetErrorHandler(nullptr); }