// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute // SPDX-License-Identifier: GPL-3.0-only #include "HDF5DataFilePluginAzInt.h" HDF5DataFilePluginAzInt::HDF5DataFilePluginAzInt(const StartMessage &message) : az_int_bin_to_q(message.az_int_bin_to_q), az_int_bin_to_two_theta(message.az_int_bin_to_two_theta), az_int_bin_to_phi(message.az_int_bin_to_phi), azimuthal_bins(message.az_int_phi_bin_count.value_or(1)), q_bins(message.az_int_q_bin_count.value_or(1)){ } void HDF5DataFilePluginAzInt::OpenFile(HDF5File &data_file, const DataMessage &msg, size_t images_per_file) { if (az_int_bin_to_q.empty() || q_bins <= 0 || azimuthal_bins <= 0) return; std::vector dim = {azimuthal_bins, q_bins}; HDF5Group(data_file, "/entry/azint").NXClass("NXcollection"); data_file.SaveVector("/entry/azint/bin_to_q", az_int_bin_to_q, dim); if (!az_int_bin_to_two_theta.empty()) data_file.SaveVector("/entry/azint/bin_to_two_theta", az_int_bin_to_two_theta, dim); if (!az_int_bin_to_phi.empty()) data_file.SaveVector("/entry/azint/bin_to_phi", az_int_bin_to_phi, dim); az_int_image.reserve(images_per_file * azimuthal_bins * q_bins); if (!msg.az_int_profile_count.empty()) { save_profile_count = true; az_int_image_count.reserve(images_per_file * azimuthal_bins * q_bins); } if (!msg.az_int_profile_std.empty()) { save_profile_std = true; az_int_image_std.reserve(images_per_file * azimuthal_bins * q_bins); } } void HDF5DataFilePluginAzInt::Write(const DataMessage &msg, uint64_t image_number) { if (az_int_bin_to_q.empty() || q_bins <= 0 || azimuthal_bins <= 0) return; if (image_number >= max_image_number || (max_image_number == 0)) { max_image_number = image_number; az_int_image.resize((max_image_number + 1) * azimuthal_bins * q_bins, NAN); if (save_profile_count) az_int_image_count.resize((max_image_number + 1) * azimuthal_bins * q_bins, 0); if (save_profile_std) az_int_image_std.resize((max_image_number + 1) * azimuthal_bins * q_bins, NAN); } if (!msg.az_int_profile.empty() && (msg.az_int_profile.size() == azimuthal_bins * q_bins)) { for (int i = 0; i < azimuthal_bins * q_bins; i++) az_int_image[image_number * azimuthal_bins * q_bins + i] = msg.az_int_profile[i]; } if (save_profile_count && !msg.az_int_profile_count.empty() && (msg.az_int_profile_count.size() == azimuthal_bins * q_bins)) { for (int i = 0; i < azimuthal_bins * q_bins; i++) az_int_image_count[image_number * azimuthal_bins * q_bins + i] = msg.az_int_profile_count[i]; } if (save_profile_std && !msg.az_int_profile_std.empty() && (msg.az_int_profile_std.size() == azimuthal_bins * q_bins)) { for (int i = 0; i < azimuthal_bins * q_bins; i++) az_int_image_std[image_number * azimuthal_bins * q_bins + i] = msg.az_int_profile_std[i]; } } void HDF5DataFilePluginAzInt::WriteFinal(HDF5File &data_file) { if (!az_int_image.empty()) data_file.SaveVector("/entry/azint/image", az_int_image, {(hsize_t) (max_image_number + 1), azimuthal_bins, q_bins}); if (!az_int_image_std.empty()) data_file.SaveVector("/entry/azint/image_std", az_int_image_std, {(hsize_t) (max_image_number + 1), azimuthal_bins, q_bins}); if (!az_int_image_count.empty()) data_file.SaveVector("/entry/azint/image_count", az_int_image_count, {(hsize_t) (max_image_number + 1), azimuthal_bins, q_bins}); }