// SPDX-FileCopyrightText: 2026 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
// SPDX-License-Identifier: GPL-3.0-only

#include "GridScanAnalysisSettings.h"

GridScanAnalysisSettings &GridScanAnalysisSettings::ProteinScoreThreshold(float input) {
    protein_score_threshold = input;
    return *this;
}

GridScanAnalysisSettings &GridScanAnalysisSettings::GrowScoreThreshold(float input) {
    grow_score_threshold = input;
    return *this;
}

GridScanAnalysisSettings &GridScanAnalysisSettings::MinBlobCells(int64_t input) {
    min_blob_cells = input;
    return *this;
}

GridScanAnalysisSettings &GridScanAnalysisSettings::DecisiveSingleCellScore(float input) {
    decisive_single_cell_score = input;
    return *this;
}

GridScanAnalysisSettings &GridScanAnalysisSettings::MaxCrystals(std::optional<int64_t> input) {
    max_crystals = input;
    return *this;
}

GridScanAnalysisSettings &GridScanAnalysisSettings::Indexing(bool input) {
    indexing = input;
    return *this;
}

float GridScanAnalysisSettings::GetProteinScoreThreshold() const {
    return protein_score_threshold;
}

float GridScanAnalysisSettings::GetGrowScoreThreshold() const {
    return grow_score_threshold;
}

int64_t GridScanAnalysisSettings::GetMinBlobCells() const {
    return min_blob_cells;
}

float GridScanAnalysisSettings::GetDecisiveSingleCellScore() const {
    return decisive_single_cell_score;
}

std::optional<int64_t> GridScanAnalysisSettings::GetMaxCrystals() const {
    return max_crystals;
}

bool GridScanAnalysisSettings::IsIndexing() const {
    return indexing;
}