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* Enhancements for XFEL

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* Enhancements for EIGER
* Writer is more flexible and capable of handling DECTRIS data
This commit is contained in:
leonarski_f
2024-03-05 20:41:47 +01:00
parent 71d862b706
commit d315506633
165 changed files with 5440 additions and 2230 deletions
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16
tests/JFJochReceiverProcessingTest.cpp
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@@ -44,7 +44,9 @@ TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_spot_and_index", "[JFJochReceiver]
// Setup acquisition device
AcquisitionDeviceGroup aq_devices;
std::unique_ptr<HLSSimulatedDevice> test = std::make_unique<HLSSimulatedDevice>(0, 64);
test->SetInternalGeneratorFrame(image_raw_geom);
for (int m = 0; m < experiment.GetModulesNum(); m++)
test->SetInternalGeneratorFrame((uint16_t *) image_raw_geom.data() + m * RAW_MODULE_SIZE, m);
aq_devices.Add(std::move(test));
JFCalibration calib(experiment);
@@ -115,7 +117,8 @@ TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_spot_and_index_min_pix_2", "[JFJoc
// Setup acquisition device
AcquisitionDeviceGroup aq_devices;
std::unique_ptr<HLSSimulatedDevice> test = std::make_unique<HLSSimulatedDevice>(0, 64);
test->SetInternalGeneratorFrame(image_raw_geom);
for (int m = 0; m < experiment.GetModulesNum(); m++)
test->SetInternalGeneratorFrame((uint16_t *) image_raw_geom.data() + m * RAW_MODULE_SIZE, m);
aq_devices.Add(std::move(test));
JFCalibration calib(experiment);
@@ -160,8 +163,10 @@ TEST_CASE("GenerateResolutionMap") {
.DetectorDistance_mm(75).BeamY_pxl(1136).BeamX_pxl(1090).PhotonEnergy_keV(12.4)
.SetUnitCell(UnitCell{.a = 36.9, .b = 78.95, .c = 78.95, .alpha =90, .beta = 90, .gamma = 90});
auto spot_finder_resolution_map = CalcSpotFinderResolutionMap(experiment);
REQUIRE(spot_finder_resolution_map.size() == experiment.GetModulesNum() * RAW_MODULE_SIZE);
std::vector<float> spot_finder_resolution_map(experiment.GetModulesNum() * RAW_MODULE_SIZE, 1.0);
for (int m = 0; m < experiment.GetModulesNum(); m++)
CalcSpotFinderResolutionMap(spot_finder_resolution_map.data() + m * RAW_MODULE_SIZE, experiment, m);
std::vector<uint32_t> spot_finder_resolution_map_int(spot_finder_resolution_map.size());
for (int i = 0; i < spot_finder_resolution_map.size(); i++)
@@ -208,7 +213,8 @@ TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_resolution", "[JFJochReceiver]") {
// Setup acquisition device
AcquisitionDeviceGroup aq_devices;
std::unique_ptr<HLSSimulatedDevice> test = std::make_unique<HLSSimulatedDevice>(0, 64);
test->SetInternalGeneratorFrame(image_raw_geom);
for (int m = 0; m < experiment.GetModulesNum(); m++)
test->SetInternalGeneratorFrame((uint16_t *) image_raw_geom.data() + m * RAW_MODULE_SIZE, m);
aq_devices.Add(std::move(test));
JFCalibration calib(experiment);