v1.0.0-rc.178 (#88)
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* Rugnux: Processes serial crystallography data from XFELs - SACLA (MPCCD), PAL-XFEL and European XFEL (CXI), LCLS (XTC) and SwissFEL Alvra (JUNGFRAU with a CrystFEL module geometry) - with several files or Jungfraujoch master files merged in one run (`rugnux *_master.h5`).
* Rugnux: Stills processing takes a known unit cell and space group as a starting point, finds the beam centre (and, with a cell, the detector distance) from the images, detects the saturation level in other facilities' files and refines the placement of individual detector panels.
* Rugnux: The stills report gives R_split and CC1/2 from frame half-sets, comparable with CrystFEL.
* jfjoch_viewer: Opens the same XFEL file formats.
* Validation: A stills battery checks Rugnux against deposited structures from SACLA, PAL-XFEL, LCLS, European XFEL and SwissFEL.
* Rugnux: More reliable convergence of rotation scaling, and live molecular replacement starts as soon as the model is uploaded.
* jfjoch_broker: Initialize clears the previous dataset's bearer tokens, image buffer and live Rugnux status, and a slow CUDA JIT cache is reported at start.

Reviewed-on: #88
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
This commit was merged in pull request #88.
This commit is contained in:
leonarski_f authored and leonarski_f committed 2026-10-21 11:20:01 +02:00
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commit afbe844b20
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@@ -87,6 +87,7 @@ TEST_CASE("ResultReport_Render", "[Diagnostics]") {
result.used_distance_mm = 243.53f;
result.has_merge_statistics = true;
result.merge_statistics.sweep_quality = TestSweepQuality();
result.blank_end_frames = 3; // a shutter that closed early: information, not a warning (below)
const auto text = RenderResultReport("prefix", "in.h5", x, result);
@@ -133,6 +134,10 @@ TEST_CASE("ResultReport_Render", "[Diagnostics]") {
CHECK(text.find("\nROTATION_REJECTED_DEG= 5.0\n") != std::string::npos);
CHECK(text.find("600 frames / 60.0 deg; 450 merged (75.0%), 100 downgraded (16.7%)")
!= std::string::npos);
CHECK(text.find("\nFRAMES_BLANK_START= 0\n") != std::string::npos);
CHECK(text.find("\nFRAMES_BLANK_END= 3\n") != std::string::npos);
CHECK(text.find("Sweep ends: 0 frame(s) at the start and 3 at the end recorded no diffraction")
!= std::string::npos);
// One table row per range, with the reason code verbatim.
CHECK(text.find(" 100 149 50 5.0 crystal_out_of_beam ")