ImagePreprocessor: Separate azint from preprocessing (later put azint on GPU!)
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@@ -5,18 +5,12 @@
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#include "ImagePreprocessor.h"
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ImagePreprocessor::ImagePreprocessor(const DiffractionExperiment &experiment,
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const AzimuthalIntegration &integration,
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const PixelMask &mask,
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std::vector<int32_t> &processed_image)
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: npixels(experiment.GetPixelsNum()),
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experiment(experiment),
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integration(integration),
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azint_sum(integration.GetBinNumber(), 0.0),
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azint_sum2(integration.GetBinNumber(), 0.0),
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azint_count(integration.GetBinNumber(), 0),
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processed_image(processed_image),
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mask_1bit(npixels, false),
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azint_bins(integration.GetBinNumber()),
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saturation_limit(experiment.GetSaturationLimit()) {
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if (processed_image.size() != npixels)
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@@ -26,11 +20,6 @@ ImagePreprocessor::ImagePreprocessor(const DiffractionExperiment &experiment,
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mask_1bit[i] = (mask.GetMask().at(i) != 0);
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}
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void ImagePreprocessor::Update(AzimuthalIntegrationProfile &profile) const {
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profile.Clear(integration);
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profile.Add(azint_sum, azint_count);
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}
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ImageStatistics ImagePreprocessor::Analyze(const uint8_t *image_ptr, CompressedImageMode image_mode) {
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switch (image_mode) {
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case CompressedImageMode::Int8:
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@@ -54,20 +43,11 @@ template<class T>
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ImageStatistics ImagePreprocessor::Analyze(const uint8_t *input, T err_pixel_val, T sat_pixel_val) {
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auto image = reinterpret_cast<const T *>(input);
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for (int i = 0; i < azint_count.size(); i++) {
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azint_sum[i] = 0.0f;
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azint_sum2[i] = 0.0f;
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azint_count[i] = 0;
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}
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ImageStatistics ret{};
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if (sat_pixel_val > saturation_limit)
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sat_pixel_val = static_cast<T>(saturation_limit);
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auto &pixel_to_bin = integration.GetPixelToBin();
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auto &corrections = integration.Corrections();
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for (int i = 0; i < npixels; i++) {
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if (mask_1bit[i] != 0) {
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processed_image[i] = INT32_MIN;
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@@ -86,14 +66,34 @@ ImageStatistics ImagePreprocessor::Analyze(const uint8_t *input, T err_pixel_val
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ret.max_value = image[i];
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if (image[i] < ret.min_value)
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ret.min_value = image[i];
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const uint16_t bin = pixel_to_bin[i];
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if (bin < azint_bins) {
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float val = image[i] * corrections[i];
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azint_sum[bin] += val;
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++azint_count[bin];
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}
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}
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}
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return ret;
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}
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}
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void ImagePreprocessor::AzimIntegration(const AzimuthalIntegration &integration, AzimuthalIntegrationProfile &profile) {
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const auto azint_bins = integration.GetBinNumber();
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std::vector<float> azint_sum(azint_bins);
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std::vector<float> azint_sum2(azint_bins);
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std::vector<uint32_t> azint_count(azint_bins);
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for (int i = 0; i < azint_count.size(); i++) {
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azint_sum[i] = 0.0f;
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azint_sum2[i] = 0.0f;
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azint_count[i] = 0;
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}
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auto &pixel_to_bin = integration.GetPixelToBin();
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auto &corrections = integration.Corrections();
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for (int i = 0; i < npixels; i++) {
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const uint16_t bin = pixel_to_bin[i];
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if (bin < azint_bins) {
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float val = static_cast<float>(processed_image[i]) * corrections[i];
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azint_sum[bin] += val;
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++azint_count[bin];
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}
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}
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profile.Clear(integration);
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profile.Add(azint_sum, azint_count);
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}
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