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jfjoch_writer: Save integrated reflection count

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leonarski_f
2026-04-28 19:54:00 +02:00
parent 97a5899b73
commit 83fff25724
18 changed files with 35 additions and 6 deletions
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writer/HDF5DataFilePluginMX.cpp
+4
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@@ -93,6 +93,7 @@ void HDF5DataFilePluginMX::OpenFile(HDF5File &data_file, const DataMessage &msg,
spot_count_ice.reserve(images_per_file);
spot_count_indexed.reserve(images_per_file);
spot_count_low_res.reserve(images_per_file);
integrated_reflections.reserve(images_per_file);
}
void HDF5DataFilePluginMX::Write(const DataMessage &msg, uint64_t image_number) {
@@ -151,6 +152,7 @@ void HDF5DataFilePluginMX::Write(const DataMessage &msg, uint64_t image_number)
beam_corr_x[image_number] = msg.beam_corr_x.value_or(NAN);
beam_corr_y[image_number] = msg.beam_corr_y.value_or(NAN);
spot_count_indexed[image_number] = msg.spot_count_indexed.value_or(0);
integrated_reflections[image_number] = msg.integrated_reflections.value_or(0);
if (msg.indexing_lattice) {
auto tmp = msg.indexing_lattice->GetVector();
@@ -228,4 +230,6 @@ void HDF5DataFilePluginMX::WriteFinal(HDF5File &data_file) {
data_file.SaveVector("/entry/MX/bravais_lattice", bravais_lattice.vec());
if (!resolution_estimate.empty())
data_file.SaveVector("/entry/MX/resolutionEstimate", resolution_estimate.vec())->Units("Angstrom");
if (!integrated_reflections.empty())
data_file.SaveVector("/entry/MX/integratedReflections", integrated_reflections.vec());
}