Merge broker-rugnux-live into rc176: rugnux in jfjoch_broker as a live thread during a DECTRIS rotation collection (off by default), the rugnux library without file I/O (results in ProcessResult::outputs, the CLI writes them through JFJochRugnuxOutput), END carrying the merged table, map coefficients and placed model
Branch reviewed ate16db07ff(review: owner's decisions accepted - _maps.mtz instead of .ccp4 in the viewer, -o "" computes everything incl. MR/validation, Ctrl+C/error paths may leave fewer files, the writer links gemmi/zlib) and merged at55184eb09with its review fixes (END size guard, frame drop as in Lite, outputs released before re-runs, pool priority, docs, frontend gating). Conflicts: rugnux/Rugnux.h (kept rc176's host_memory_budget_bytes, output_prefix removed as on the branch), rugnux/RugnuxPipeline.h (MtzTable future + rc176's GPUMerge pointer), MolecularReplacement.h/.cpp (rc176's GPU cost model, packed transform and split functions with the branch's RugnuxModel signature; search_model with rc176's other_budgets, result.model_name). tests/RugnuxLargeTest.cpp: rc176's host-budget test writes its files through WriteRugnuxOutputs now that the library writes none. Generated code (broker/gen, frontend client, Python client docs, Redoc) regenerated from the merged jfjoch_api.yaml with update_version.sh (version unchanged). Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01PXc1zD1yxHqaR1DGdCTHL4
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@@ -126,6 +126,10 @@ Class | Method | HTTP request | Description
|
||||
*DefaultApi* | [**config_mask_tiff_get**](docs/DefaultApi.md#config_mask_tiff_get) | **GET** /config/mask.tiff | Get mask of the detector (TIFF)
|
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*DefaultApi* | [**config_roi_get**](docs/DefaultApi.md#config_roi_get) | **GET** /config/roi | Get ROI definitions
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*DefaultApi* | [**config_roi_put**](docs/DefaultApi.md#config_roi_put) | **PUT** /config/roi | Upload ROI definitions
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*DefaultApi* | [**config_rugnux_get**](docs/DefaultApi.md#config_rugnux_get) | **GET** /config/rugnux | Get rugnux live mode settings and model status
|
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*DefaultApi* | [**config_rugnux_model_delete**](docs/DefaultApi.md#config_rugnux_model_delete) | **DELETE** /config/rugnux/model | Remove the model used by rugnux live mode
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*DefaultApi* | [**config_rugnux_model_put**](docs/DefaultApi.md#config_rugnux_model_put) | **PUT** /config/rugnux/model | Upload the model used by rugnux live mode
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*DefaultApi* | [**config_rugnux_put**](docs/DefaultApi.md#config_rugnux_put) | **PUT** /config/rugnux | Change rugnux live mode settings
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*DefaultApi* | [**config_select_detector_get**](docs/DefaultApi.md#config_select_detector_get) | **GET** /config/select_detector | List available detectors
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*DefaultApi* | [**config_select_detector_put**](docs/DefaultApi.md#config_select_detector_put) | **PUT** /config/select_detector | Select detector
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*DefaultApi* | [**config_spot_finding_get**](docs/DefaultApi.md#config_spot_finding_get) | **GET** /config/spot_finding | Get data processing configuration
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@@ -155,6 +159,7 @@ Class | Method | HTTP request | Description
|
||||
*DefaultApi* | [**preview_plot_bin_get**](docs/DefaultApi.md#preview_plot_bin_get) | **GET** /preview/plot.bin | Generate 1D plot from Jungfraujoch and send in raw binary format. Data are provided as (32-bit) float binary array. This format doesn't transmit information about X-axis, only values, so it is of limited use for azimuthal integration.
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*DefaultApi* | [**preview_plot_get**](docs/DefaultApi.md#preview_plot_get) | **GET** /preview/plot | Generate 1D plot from Jungfraujoch
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*DefaultApi* | [**result_scan_get**](docs/DefaultApi.md#result_scan_get) | **GET** /result/scan | Get full scan result
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*DefaultApi* | [**rugnux_status_get**](docs/DefaultApi.md#rugnux_status_get) | **GET** /rugnux/status | Get live rugnux processing status of the last collection
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*DefaultApi* | [**start_post**](docs/DefaultApi.md#start_post) | **POST** /start | Start detector
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*DefaultApi* | [**statistics_calibration_get**](docs/DefaultApi.md#statistics_calibration_get) | **GET** /statistics/calibration | Get calibration statistics
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*DefaultApi* | [**statistics_data_collection_get**](docs/DefaultApi.md#statistics_data_collection_get) | **GET** /statistics/data_collection | Get data collection statistics
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@@ -224,6 +229,11 @@ Class | Method | HTTP request | Description
|
||||
- [RoiCircleList](docs/RoiCircleList.md)
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- [RoiDefinitions](docs/RoiDefinitions.md)
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- [RotationAxis](docs/RotationAxis.md)
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- [RugnuxLiveStatus](docs/RugnuxLiveStatus.md)
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- [RugnuxLiveStep](docs/RugnuxLiveStep.md)
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- [RugnuxSettings](docs/RugnuxSettings.md)
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- [RugnuxStatus](docs/RugnuxStatus.md)
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- [RugnuxSummaryRow](docs/RugnuxSummaryRow.md)
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- [ScanResult](docs/ScanResult.md)
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- [ScanResultImagesInner](docs/ScanResultImagesInner.md)
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- [SpotFindingSettings](docs/SpotFindingSettings.md)
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@@ -29,6 +29,10 @@ Method | HTTP request | Description
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[**config_mask_tiff_get**](DefaultApi.md#config_mask_tiff_get) | **GET** /config/mask.tiff | Get mask of the detector (TIFF)
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[**config_roi_get**](DefaultApi.md#config_roi_get) | **GET** /config/roi | Get ROI definitions
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[**config_roi_put**](DefaultApi.md#config_roi_put) | **PUT** /config/roi | Upload ROI definitions
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[**config_rugnux_get**](DefaultApi.md#config_rugnux_get) | **GET** /config/rugnux | Get rugnux live mode settings and model status
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[**config_rugnux_model_delete**](DefaultApi.md#config_rugnux_model_delete) | **DELETE** /config/rugnux/model | Remove the model used by rugnux live mode
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[**config_rugnux_model_put**](DefaultApi.md#config_rugnux_model_put) | **PUT** /config/rugnux/model | Upload the model used by rugnux live mode
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[**config_rugnux_put**](DefaultApi.md#config_rugnux_put) | **PUT** /config/rugnux | Change rugnux live mode settings
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[**config_select_detector_get**](DefaultApi.md#config_select_detector_get) | **GET** /config/select_detector | List available detectors
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[**config_select_detector_put**](DefaultApi.md#config_select_detector_put) | **PUT** /config/select_detector | Select detector
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[**config_spot_finding_get**](DefaultApi.md#config_spot_finding_get) | **GET** /config/spot_finding | Get data processing configuration
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@@ -58,6 +62,7 @@ Method | HTTP request | Description
|
||||
[**preview_plot_bin_get**](DefaultApi.md#preview_plot_bin_get) | **GET** /preview/plot.bin | Generate 1D plot from Jungfraujoch and send in raw binary format. Data are provided as (32-bit) float binary array. This format doesn't transmit information about X-axis, only values, so it is of limited use for azimuthal integration.
|
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[**preview_plot_get**](DefaultApi.md#preview_plot_get) | **GET** /preview/plot | Generate 1D plot from Jungfraujoch
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[**result_scan_get**](DefaultApi.md#result_scan_get) | **GET** /result/scan | Get full scan result
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[**rugnux_status_get**](DefaultApi.md#rugnux_status_get) | **GET** /rugnux/status | Get live rugnux processing status of the last collection
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[**start_post**](DefaultApi.md#start_post) | **POST** /start | Start detector
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[**statistics_calibration_get**](DefaultApi.md#statistics_calibration_get) | **GET** /statistics/calibration | Get calibration statistics
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[**statistics_data_collection_get**](DefaultApi.md#statistics_data_collection_get) | **GET** /statistics/data_collection | Get data collection statistics
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@@ -80,6 +85,11 @@ Command will inform FPGA network card to stop pedestal or data collection at the
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Any frame that is currently being processed by CPU will be finished and sent to writer.
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Given the command is making sure to gracefully stop data acquisition and detector, it might take some time to switch back after command finished to `Idle` state.
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With rugnux live mode (`/config/rugnux`) the command also cuts the rugnux analysis, during the collection
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or after its last image alike: the collection ends with what the analysis has established
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(see `cut` in `/rugnux/status`). After the last image the collection itself is complete and is not
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marked as cancelled.
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If data collection is not running, the command has no effect.
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@@ -1730,6 +1740,318 @@ No authorization required
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|
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[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
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# **config_rugnux_get**
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> RugnuxStatus config_rugnux_get()
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Get rugnux live mode settings and model status
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Can be done anytime
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### Example
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|
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* Bearer Authentication (bearerAuth):
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|
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```python
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import jfjoch_client
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from jfjoch_client.models.rugnux_status import RugnuxStatus
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from jfjoch_client.rest import ApiException
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from pprint import pprint
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# Defining the host is optional and defaults to http://localhost:5232
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# See configuration.py for a list of all supported configuration parameters.
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configuration = jfjoch_client.Configuration(
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host = "http://localhost:5232"
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)
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# The client must configure the authentication and authorization parameters
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# in accordance with the API server security policy.
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# Examples for each auth method are provided below, use the example that
|
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# satisfies your auth use case.
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|
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# Configure Bearer authorization: bearerAuth
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configuration = jfjoch_client.Configuration(
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access_token = os.environ["BEARER_TOKEN"]
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)
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|
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# Enter a context with an instance of the API client
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with jfjoch_client.ApiClient(configuration) as api_client:
|
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# Create an instance of the API class
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api_instance = jfjoch_client.DefaultApi(api_client)
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try:
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# Get rugnux live mode settings and model status
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api_response = api_instance.config_rugnux_get()
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print("The response of DefaultApi->config_rugnux_get:\n")
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pprint(api_response)
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except Exception as e:
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print("Exception when calling DefaultApi->config_rugnux_get: %s\n" % e)
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```
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|
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|
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|
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### Parameters
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|
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This endpoint does not need any parameter.
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|
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### Return type
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||||
|
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[**RugnuxStatus**](RugnuxStatus.md)
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|
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### Authorization
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|
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[bearerAuth](../README.md#bearerAuth)
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|
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### HTTP request headers
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|
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- **Content-Type**: Not defined
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- **Accept**: text/plain, application/json
|
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|
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### HTTP response details
|
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|
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| Status code | Description | Response headers |
|
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|-------------|-------------|------------------|
|
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**401** | The current dataset is protected and no valid bearer token was presented. | - |
|
||||
**200** | Everything OK | - |
|
||||
|
||||
[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
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|
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# **config_rugnux_model_delete**
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> config_rugnux_model_delete()
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Remove the model used by rugnux live mode
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|
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This can only be done when detector is `Idle`, `Error` or `Inactive` states.
|
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|
||||
|
||||
### Example
|
||||
|
||||
* Bearer Authentication (bearerAuth):
|
||||
|
||||
```python
|
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import jfjoch_client
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from jfjoch_client.rest import ApiException
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from pprint import pprint
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|
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# Defining the host is optional and defaults to http://localhost:5232
|
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# See configuration.py for a list of all supported configuration parameters.
|
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configuration = jfjoch_client.Configuration(
|
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host = "http://localhost:5232"
|
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)
|
||||
|
||||
# The client must configure the authentication and authorization parameters
|
||||
# in accordance with the API server security policy.
|
||||
# Examples for each auth method are provided below, use the example that
|
||||
# satisfies your auth use case.
|
||||
|
||||
# Configure Bearer authorization: bearerAuth
|
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configuration = jfjoch_client.Configuration(
|
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access_token = os.environ["BEARER_TOKEN"]
|
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)
|
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|
||||
# Enter a context with an instance of the API client
|
||||
with jfjoch_client.ApiClient(configuration) as api_client:
|
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# Create an instance of the API class
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api_instance = jfjoch_client.DefaultApi(api_client)
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try:
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# Remove the model used by rugnux live mode
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api_instance.config_rugnux_model_delete()
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except Exception as e:
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print("Exception when calling DefaultApi->config_rugnux_model_delete: %s\n" % e)
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```
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|
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### Parameters
|
||||
|
||||
This endpoint does not need any parameter.
|
||||
|
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### Return type
|
||||
|
||||
void (empty response body)
|
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|
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### Authorization
|
||||
|
||||
[bearerAuth](../README.md#bearerAuth)
|
||||
|
||||
### HTTP request headers
|
||||
|
||||
- **Content-Type**: Not defined
|
||||
- **Accept**: text/plain, application/json
|
||||
|
||||
### HTTP response details
|
||||
|
||||
| Status code | Description | Response headers |
|
||||
|-------------|-------------|------------------|
|
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**401** | The current dataset is protected and no valid bearer token was presented. | - |
|
||||
**200** | All good | - |
|
||||
**500** | Error within Jungfraujoch code - see output message. | - |
|
||||
|
||||
[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
|
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|
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# **config_rugnux_model_put**
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> config_rugnux_model_put(body=body)
|
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|
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Upload the model used by rugnux live mode
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|
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This can only be done when detector is `Idle`, `Error` or `Inactive` states.
|
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The model (PDB or mmCIF, optionally gzipped; at most 64 MiB) is used for molecular replacement
|
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and validation of every following rugnux live collection, until it is removed with
|
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`DELETE /config/rugnux/model` or replaced by another upload.
|
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|
||||
|
||||
### Example
|
||||
|
||||
* Bearer Authentication (bearerAuth):
|
||||
|
||||
```python
|
||||
import jfjoch_client
|
||||
from jfjoch_client.rest import ApiException
|
||||
from pprint import pprint
|
||||
|
||||
# Defining the host is optional and defaults to http://localhost:5232
|
||||
# See configuration.py for a list of all supported configuration parameters.
|
||||
configuration = jfjoch_client.Configuration(
|
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host = "http://localhost:5232"
|
||||
)
|
||||
|
||||
# The client must configure the authentication and authorization parameters
|
||||
# in accordance with the API server security policy.
|
||||
# Examples for each auth method are provided below, use the example that
|
||||
# satisfies your auth use case.
|
||||
|
||||
# Configure Bearer authorization: bearerAuth
|
||||
configuration = jfjoch_client.Configuration(
|
||||
access_token = os.environ["BEARER_TOKEN"]
|
||||
)
|
||||
|
||||
# Enter a context with an instance of the API client
|
||||
with jfjoch_client.ApiClient(configuration) as api_client:
|
||||
# Create an instance of the API class
|
||||
api_instance = jfjoch_client.DefaultApi(api_client)
|
||||
body = None # bytearray | (optional)
|
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|
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try:
|
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# Upload the model used by rugnux live mode
|
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api_instance.config_rugnux_model_put(body=body)
|
||||
except Exception as e:
|
||||
print("Exception when calling DefaultApi->config_rugnux_model_put: %s\n" % e)
|
||||
```
|
||||
|
||||
|
||||
|
||||
### Parameters
|
||||
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------- | ------------- | ------------- | -------------
|
||||
**body** | **bytearray**| | [optional]
|
||||
|
||||
### Return type
|
||||
|
||||
void (empty response body)
|
||||
|
||||
### Authorization
|
||||
|
||||
[bearerAuth](../README.md#bearerAuth)
|
||||
|
||||
### HTTP request headers
|
||||
|
||||
- **Content-Type**: application/octet-stream
|
||||
- **Accept**: text/plain, application/json
|
||||
|
||||
### HTTP response details
|
||||
|
||||
| Status code | Description | Response headers |
|
||||
|-------------|-------------|------------------|
|
||||
**401** | The current dataset is protected and no valid bearer token was presented. | - |
|
||||
**200** | All good | - |
|
||||
**400** | Empty body, or not a model that can be read (PDB or mmCIF, optionally gzipped) | - |
|
||||
**413** | Model larger than 64 MiB | - |
|
||||
**500** | Error within Jungfraujoch code - see output message. | - |
|
||||
|
||||
[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
|
||||
|
||||
# **config_rugnux_put**
|
||||
> config_rugnux_put(rugnux_settings=rugnux_settings)
|
||||
|
||||
Change rugnux live mode settings
|
||||
|
||||
This can only be done when detector is `Idle`, `Error` or `Inactive` states.
|
||||
|
||||
|
||||
### Example
|
||||
|
||||
* Bearer Authentication (bearerAuth):
|
||||
|
||||
```python
|
||||
import jfjoch_client
|
||||
from jfjoch_client.models.rugnux_settings import RugnuxSettings
|
||||
from jfjoch_client.rest import ApiException
|
||||
from pprint import pprint
|
||||
|
||||
# Defining the host is optional and defaults to http://localhost:5232
|
||||
# See configuration.py for a list of all supported configuration parameters.
|
||||
configuration = jfjoch_client.Configuration(
|
||||
host = "http://localhost:5232"
|
||||
)
|
||||
|
||||
# The client must configure the authentication and authorization parameters
|
||||
# in accordance with the API server security policy.
|
||||
# Examples for each auth method are provided below, use the example that
|
||||
# satisfies your auth use case.
|
||||
|
||||
# Configure Bearer authorization: bearerAuth
|
||||
configuration = jfjoch_client.Configuration(
|
||||
access_token = os.environ["BEARER_TOKEN"]
|
||||
)
|
||||
|
||||
# Enter a context with an instance of the API client
|
||||
with jfjoch_client.ApiClient(configuration) as api_client:
|
||||
# Create an instance of the API class
|
||||
api_instance = jfjoch_client.DefaultApi(api_client)
|
||||
rugnux_settings = jfjoch_client.RugnuxSettings() # RugnuxSettings | (optional)
|
||||
|
||||
try:
|
||||
# Change rugnux live mode settings
|
||||
api_instance.config_rugnux_put(rugnux_settings=rugnux_settings)
|
||||
except Exception as e:
|
||||
print("Exception when calling DefaultApi->config_rugnux_put: %s\n" % e)
|
||||
```
|
||||
|
||||
|
||||
|
||||
### Parameters
|
||||
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------- | ------------- | ------------- | -------------
|
||||
**rugnux_settings** | [**RugnuxSettings**](RugnuxSettings.md)| | [optional]
|
||||
|
||||
### Return type
|
||||
|
||||
void (empty response body)
|
||||
|
||||
### Authorization
|
||||
|
||||
[bearerAuth](../README.md#bearerAuth)
|
||||
|
||||
### HTTP request headers
|
||||
|
||||
- **Content-Type**: application/json
|
||||
- **Accept**: text/plain, application/json
|
||||
|
||||
### HTTP response details
|
||||
|
||||
| Status code | Description | Response headers |
|
||||
|-------------|-------------|------------------|
|
||||
**401** | The current dataset is protected and no valid bearer token was presented. | - |
|
||||
**200** | Everything OK | - |
|
||||
**400** | Input parsing or validation error | - |
|
||||
**500** | Error within Jungfraujoch code - see output message. | - |
|
||||
|
||||
[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
|
||||
|
||||
# **config_select_detector_get**
|
||||
> DetectorList config_select_detector_get()
|
||||
|
||||
@@ -3793,6 +4115,81 @@ This endpoint does not need any parameter.
|
||||
|
||||
[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
|
||||
|
||||
# **rugnux_status_get**
|
||||
> RugnuxLiveStatus rugnux_status_get()
|
||||
|
||||
Get live rugnux processing status of the last collection
|
||||
|
||||
Can be done anytime
|
||||
|
||||
### Example
|
||||
|
||||
* Bearer Authentication (bearerAuth):
|
||||
|
||||
```python
|
||||
import jfjoch_client
|
||||
from jfjoch_client.models.rugnux_live_status import RugnuxLiveStatus
|
||||
from jfjoch_client.rest import ApiException
|
||||
from pprint import pprint
|
||||
|
||||
# Defining the host is optional and defaults to http://localhost:5232
|
||||
# See configuration.py for a list of all supported configuration parameters.
|
||||
configuration = jfjoch_client.Configuration(
|
||||
host = "http://localhost:5232"
|
||||
)
|
||||
|
||||
# The client must configure the authentication and authorization parameters
|
||||
# in accordance with the API server security policy.
|
||||
# Examples for each auth method are provided below, use the example that
|
||||
# satisfies your auth use case.
|
||||
|
||||
# Configure Bearer authorization: bearerAuth
|
||||
configuration = jfjoch_client.Configuration(
|
||||
access_token = os.environ["BEARER_TOKEN"]
|
||||
)
|
||||
|
||||
# Enter a context with an instance of the API client
|
||||
with jfjoch_client.ApiClient(configuration) as api_client:
|
||||
# Create an instance of the API class
|
||||
api_instance = jfjoch_client.DefaultApi(api_client)
|
||||
|
||||
try:
|
||||
# Get live rugnux processing status of the last collection
|
||||
api_response = api_instance.rugnux_status_get()
|
||||
print("The response of DefaultApi->rugnux_status_get:\n")
|
||||
pprint(api_response)
|
||||
except Exception as e:
|
||||
print("Exception when calling DefaultApi->rugnux_status_get: %s\n" % e)
|
||||
```
|
||||
|
||||
|
||||
|
||||
### Parameters
|
||||
|
||||
This endpoint does not need any parameter.
|
||||
|
||||
### Return type
|
||||
|
||||
[**RugnuxLiveStatus**](RugnuxLiveStatus.md)
|
||||
|
||||
### Authorization
|
||||
|
||||
[bearerAuth](../README.md#bearerAuth)
|
||||
|
||||
### HTTP request headers
|
||||
|
||||
- **Content-Type**: Not defined
|
||||
- **Accept**: text/plain, application/json
|
||||
|
||||
### HTTP response details
|
||||
|
||||
| Status code | Description | Response headers |
|
||||
|-------------|-------------|------------------|
|
||||
**401** | The current dataset is protected and no valid bearer token was presented. | - |
|
||||
**200** | Everything OK | - |
|
||||
|
||||
[[Back to top]](#) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to Model list]](../README.md#documentation-for-models) [[Back to README]](../README.md)
|
||||
|
||||
# **start_post**
|
||||
> start_post(dataset_settings=dataset_settings)
|
||||
|
||||
|
||||
@@ -27,6 +27,7 @@ Name | Type | Description | Notes
|
||||
**zeromq_preview** | [**ZeromqPreviewSettings**](ZeromqPreviewSettings.md) | | [optional]
|
||||
**zeromq_metadata** | [**ZeromqMetadataSettings**](ZeromqMetadataSettings.md) | | [optional]
|
||||
**dark_mask** | [**DarkMaskSettings**](DarkMaskSettings.md) | | [optional]
|
||||
**rugnux** | [**RugnuxSettings**](RugnuxSettings.md) | | [optional]
|
||||
|
||||
## Example
|
||||
|
||||
|
||||
@@ -0,0 +1,46 @@
|
||||
# RugnuxLiveStatus
|
||||
|
||||
Live rugnux processing of the last collection; kept until the next collection starts
|
||||
|
||||
## Properties
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------ | ------------- | ------------- | -------------
|
||||
**state** | **str** | |
|
||||
**probe** | **str** | Answer of the early lattice probe on the first 60 degrees; empty until it answers |
|
||||
**probe_s** | **float** | When the probe answered, since the collection started | [optional]
|
||||
**message** | **str** | Why the run failed or was skipped |
|
||||
**images_expected** | **int** | |
|
||||
**images_received** | **int** | |
|
||||
**elapsed_s** | **float** | |
|
||||
**step_progress** | **float** | Fraction of the current pass's images | [optional]
|
||||
**steps** | [**List[RugnuxLiveStep]**](RugnuxLiveStep.md) | |
|
||||
**last_image_s** | **float** | When the last image arrived (and the cutoff timer started), since the collection started | [optional]
|
||||
**cut** | **str** | Empty, or why the analysis was cut: `deadline` (`deadline_s` after the last image) or `cancel` (`POST /cancel`). The end message then carried what was established at the cut. | [optional]
|
||||
**cut_s** | **float** | When the analysis was cut, since the collection started | [optional]
|
||||
**last_image_to_written_s** | **float** | From the last image received to all results written | [optional]
|
||||
**verdict** | **str** | OK, WARNINGS, UNUSABLE or FAILED; empty until the run is over |
|
||||
**verdict_text** | **str** | |
|
||||
**summary** | [**List[RugnuxSummaryRow]**](RugnuxSummaryRow.md) | |
|
||||
**warnings** | **List[str]** | |
|
||||
|
||||
## Example
|
||||
|
||||
```python
|
||||
from jfjoch_client.models.rugnux_live_status import RugnuxLiveStatus
|
||||
|
||||
# TODO update the JSON string below
|
||||
json = "{}"
|
||||
# create an instance of RugnuxLiveStatus from a JSON string
|
||||
rugnux_live_status_instance = RugnuxLiveStatus.from_json(json)
|
||||
# print the JSON string representation of the object
|
||||
print(RugnuxLiveStatus.to_json())
|
||||
|
||||
# convert the object into a dict
|
||||
rugnux_live_status_dict = rugnux_live_status_instance.to_dict()
|
||||
# create an instance of RugnuxLiveStatus from a dict
|
||||
rugnux_live_status_from_dict = RugnuxLiveStatus.from_dict(rugnux_live_status_dict)
|
||||
```
|
||||
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
|
||||
|
||||
|
||||
@@ -0,0 +1,32 @@
|
||||
# RugnuxLiveStep
|
||||
|
||||
|
||||
## Properties
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------ | ------------- | ------------- | -------------
|
||||
**title** | **str** | |
|
||||
**started_s** | **float** | Start of the step, since the collection started |
|
||||
**duration_s** | **float** | Set once the next step starts or the run ends | [optional]
|
||||
**notes** | **List[str]** | What the step found (e.g. lattice, space group) |
|
||||
|
||||
## Example
|
||||
|
||||
```python
|
||||
from jfjoch_client.models.rugnux_live_step import RugnuxLiveStep
|
||||
|
||||
# TODO update the JSON string below
|
||||
json = "{}"
|
||||
# create an instance of RugnuxLiveStep from a JSON string
|
||||
rugnux_live_step_instance = RugnuxLiveStep.from_json(json)
|
||||
# print the JSON string representation of the object
|
||||
print(RugnuxLiveStep.to_json())
|
||||
|
||||
# convert the object into a dict
|
||||
rugnux_live_step_dict = rugnux_live_step_instance.to_dict()
|
||||
# create an instance of RugnuxLiveStep from a dict
|
||||
rugnux_live_step_from_dict = RugnuxLiveStep.from_dict(rugnux_live_step_dict)
|
||||
```
|
||||
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
|
||||
|
||||
|
||||
@@ -0,0 +1,32 @@
|
||||
# RugnuxSettings
|
||||
|
||||
Rugnux live mode: rotation collections from a DECTRIS detector are processed by rugnux inside the broker while they arrive, and the merged result is sent to the writer.
|
||||
|
||||
## Properties
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------ | ------------- | ------------- | -------------
|
||||
**enable** | **bool** | Process DECTRIS rotation collections with rugnux live | [optional] [default to False]
|
||||
**reserved_cpus** | **int** | CPU threads left to the receiver and the image pusher while rugnux runs | [optional] [default to 4]
|
||||
**deadline_s** | **float** | Fixed cutoff: this long after the last image the analysis is cut, and the collection ends with what it has established (as `POST /cancel` after the last image does). 0 means no cutoff. | [optional] [default to 0.0]
|
||||
|
||||
## Example
|
||||
|
||||
```python
|
||||
from jfjoch_client.models.rugnux_settings import RugnuxSettings
|
||||
|
||||
# TODO update the JSON string below
|
||||
json = "{}"
|
||||
# create an instance of RugnuxSettings from a JSON string
|
||||
rugnux_settings_instance = RugnuxSettings.from_json(json)
|
||||
# print the JSON string representation of the object
|
||||
print(RugnuxSettings.to_json())
|
||||
|
||||
# convert the object into a dict
|
||||
rugnux_settings_dict = rugnux_settings_instance.to_dict()
|
||||
# create an instance of RugnuxSettings from a dict
|
||||
rugnux_settings_from_dict = RugnuxSettings.from_dict(rugnux_settings_dict)
|
||||
```
|
||||
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
|
||||
|
||||
|
||||
@@ -0,0 +1,33 @@
|
||||
# RugnuxStatus
|
||||
|
||||
|
||||
## Properties
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------ | ------------- | ------------- | -------------
|
||||
**enable** | **bool** | Rugnux live mode is enabled |
|
||||
**reserved_cpus** | **int** | CPU threads left to the receiver and the image pusher while rugnux runs |
|
||||
**deadline_s** | **float** | Seconds after the last image at which the analysis is cut; 0 means no cutoff | [optional]
|
||||
**model_loaded** | **bool** | A model was uploaded with `PUT /config/rugnux/model` |
|
||||
**model_size_bytes** | **int** | Size of the uploaded model file | [optional]
|
||||
|
||||
## Example
|
||||
|
||||
```python
|
||||
from jfjoch_client.models.rugnux_status import RugnuxStatus
|
||||
|
||||
# TODO update the JSON string below
|
||||
json = "{}"
|
||||
# create an instance of RugnuxStatus from a JSON string
|
||||
rugnux_status_instance = RugnuxStatus.from_json(json)
|
||||
# print the JSON string representation of the object
|
||||
print(RugnuxStatus.to_json())
|
||||
|
||||
# convert the object into a dict
|
||||
rugnux_status_dict = rugnux_status_instance.to_dict()
|
||||
# create an instance of RugnuxStatus from a dict
|
||||
rugnux_status_from_dict = RugnuxStatus.from_dict(rugnux_status_dict)
|
||||
```
|
||||
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
|
||||
|
||||
|
||||
@@ -0,0 +1,30 @@
|
||||
# RugnuxSummaryRow
|
||||
|
||||
|
||||
## Properties
|
||||
|
||||
Name | Type | Description | Notes
|
||||
------------ | ------------- | ------------- | -------------
|
||||
**label** | **str** | |
|
||||
**value** | **str** | |
|
||||
|
||||
## Example
|
||||
|
||||
```python
|
||||
from jfjoch_client.models.rugnux_summary_row import RugnuxSummaryRow
|
||||
|
||||
# TODO update the JSON string below
|
||||
json = "{}"
|
||||
# create an instance of RugnuxSummaryRow from a JSON string
|
||||
rugnux_summary_row_instance = RugnuxSummaryRow.from_json(json)
|
||||
# print the JSON string representation of the object
|
||||
print(RugnuxSummaryRow.to_json())
|
||||
|
||||
# convert the object into a dict
|
||||
rugnux_summary_row_dict = rugnux_summary_row_instance.to_dict()
|
||||
# create an instance of RugnuxSummaryRow from a dict
|
||||
rugnux_summary_row_from_dict = RugnuxSummaryRow.from_dict(rugnux_summary_row_dict)
|
||||
```
|
||||
[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
|
||||
|
||||
|
||||
Reference in new issue
Block a user