From 60bcaee351a6e94e021f139eb8955b55c8ee9360 Mon Sep 17 00:00:00 2001 From: leonarski_f Date: Tue, 28 Apr 2026 22:24:53 +0200 Subject: [PATCH] JFJochReceiverProcessingTest: Add test of receiver running without valid spots --- tests/JFJochReceiverProcessingTest.cpp | 78 ++++++++++++++++++++++++++ 1 file changed, 78 insertions(+) diff --git a/tests/JFJochReceiverProcessingTest.cpp b/tests/JFJochReceiverProcessingTest.cpp index 1715a4e7..dd623e40 100644 --- a/tests/JFJochReceiverProcessingTest.cpp +++ b/tests/JFJochReceiverProcessingTest.cpp @@ -375,6 +375,8 @@ TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_spot_index_and_integrate", "[JFJoc CHECK(receiver_out.status.images_sent == experiment.GetImageNum()); CHECK(!receiver_out.status.cancelled); + logger.Info("Processing time {}", receiver_out.processing_time.processing); + // No progress value at the end of measurement REQUIRE(!service.GetProgress().has_value()); auto b_factor = service.GetDataProcessingPlot( @@ -386,6 +388,82 @@ TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_spot_index_and_integrate", "[JFJoc REQUIRE_NOTHROW(writer_future.get()); } +TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_spot_index_and_integrate_no_spots", "[JFJochReceiver]") { + Logger logger(Catch::getResultCapture().getCurrentTestName()); + + RegisterHDF5Filter(); + + const uint16_t nthreads = 4; + + DiffractionExperiment experiment(DetJF4M()); + experiment.ImagesPerTrigger(5).NumTriggers(1).UseInternalPacketGenerator(true).ImagesPerFile(2) + .FilePrefix("lyso_test").JungfrauConvPhotonCnt(false).SetFileWriterFormat(FileWriterFormat::NXmxVDS).OverwriteExistingFiles(true) + .DetectorDistance_mm(75).BeamY_pxl(1136).BeamX_pxl(1090).IncidentEnergy_keV(12.4) + .SetUnitCell(UnitCell{.a = 36.9, .b = 78.95, .c = 78.95, .alpha =90, .beta = 90, .gamma = 90}); + PixelMask pixel_mask(experiment); + + // Load example image + HDF5ReadOnlyFile data("../../tests/test_data/compression_benchmark.h5"); + HDF5DataSet dataset(data, "/entry/data/data"); + HDF5DataSpace file_space(dataset); + + REQUIRE(file_space.GetDimensions()[2] == experiment.GetXPixelsNum()); + REQUIRE(file_space.GetDimensions()[1] == experiment.GetYPixelsNum()); + std::vector image_conv (file_space.GetDimensions()[1] * file_space.GetDimensions()[2]); + + std::vector start = {4,0,0}; + std::vector file_size = {1, file_space.GetDimensions()[1], file_space.GetDimensions()[2]}; + dataset.ReadVector(image_conv, start, file_size); + + std::vector image_raw_geom(experiment.GetModulesNum() * RAW_MODULE_SIZE); + ConvertedToRawGeometry(experiment, image_raw_geom.data(), image_conv.data()); + logger.Info("Loaded image"); + + // Setup acquisition device + AcquisitionDeviceGroup aq_devices; + std::unique_ptr test = std::make_unique(0, 64); + for (int m = 0; m < experiment.GetModulesNum(); m++) + test->SetInternalGeneratorFrame((uint16_t *) image_raw_geom.data() + m * RAW_MODULE_SIZE, m); + + aq_devices.Add(std::move(test)); + + ZMQStream2Pusher pusher({"ipc://*"}); + pusher.WriterNotificationSocket("ipc://*"); + + ZMQImagePuller puller(pusher.GetAddress()[0]); + StreamWriter writer(logger, puller); + auto writer_future = std::async(std::launch::async, &StreamWriter::Run, &writer); + + JFJochReceiverService service(aq_devices, logger, pusher); + service.NumThreads(nthreads); + service.Indexing(experiment.GetIndexingSettings()); + + // No progress value at the start of measurement + REQUIRE(!service.GetProgress().has_value()); + + SpotFindingSettings settings = DiffractionExperiment::DefaultDataProcessingSettings(); + settings.signal_to_noise_threshold = 20; // make sure there are zero spots possible + settings.photon_count_threshold = 10000; + settings.min_pix_per_spot = 5; + settings.max_pix_per_spot = 200; + settings.high_resolution_limit = 2.0; + settings.low_resolution_limit = 50.0; + settings.quick_integration = true; + service.SetSpotFindingSettings(settings); + + service.Start(experiment, pixel_mask, nullptr); + auto receiver_out = service.Stop(); + + CHECK(receiver_out.efficiency == 1.0); + REQUIRE(receiver_out.status.indexing_rate); + CHECK(receiver_out.status.indexing_rate.value() == 0.0); + CHECK(receiver_out.status.images_sent == experiment.GetImageNum()); + CHECK(!receiver_out.status.cancelled); + logger.Info("Processing time {}", receiver_out.processing_time.processing); + // No progress value at the end of measurement + REQUIRE(!service.GetProgress().has_value()); + REQUIRE_NOTHROW(writer_future.get()); +} TEST_CASE("JFJochIntegrationTest_ZMQ_lysozyme_azint_2d", "[JFJochReceiver]") { Logger logger(Catch::getResultCapture().getCurrentTestName());