From c7d53646ce15c2d85582a47b957ecc6928b44650 Mon Sep 17 00:00:00 2001
From: jungfrau <jungfrau@mx-spark-01>
Date: Fri, 2 Oct 2026 13:30:10 +0200
Subject: [PATCH] small cluster model re-gated on the Spark in one environment:
 gate_passed against v3; comparison after cycle 4

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
---
 .../gold_report.json                          | 177 +++++++---
 runs/2026-09-30_v3-s-640px/metrics.json       |  94 ++++-
 runs/2026-09-30_v3-s-640px/run.json           |  18 +-
 runs/README.md                                |   7 +-
 runs/clean_gold_comparison.json               | 332 +++++++++---------
 5 files changed, 382 insertions(+), 246 deletions(-)

diff --git a/models/registry/yolo26s-seg-v3-s-640px-2026-10-01/gold_report.json b/models/registry/yolo26s-seg-v3-s-640px-2026-10-01/gold_report.json
index 0cc3d83..53e3029 100644
--- a/models/registry/yolo26s-seg-v3-s-640px-2026-10-01/gold_report.json
+++ b/models/registry/yolo26s-seg-v3-s-640px-2026-10-01/gold_report.json
@@ -1,54 +1,54 @@
 {
   "per_class": {
     "loop_all": {
-      "tp": 185,
-      "fp": 18,
-      "fn": 7,
-      "precision": 0.9113300492610837,
-      "recall": 0.9635416666666666,
-      "f1": 0.9367088607594936,
-      "mean_mask_iou": 0.8785916632633505,
-      "n_matched": 185
+      "tp": 187,
+      "fp": 13,
+      "fn": 5,
+      "precision": 0.935,
+      "recall": 0.9739583333333334,
+      "f1": 0.9540816326530612,
+      "mean_mask_iou": 0.8972832445017794,
+      "n_matched": 187
     },
     "pin": {
-      "tp": 135,
-      "fp": 14,
-      "fn": 11,
-      "precision": 0.9060402684563759,
-      "recall": 0.9246575342465754,
-      "f1": 0.9152542372881356,
-      "mean_mask_iou": 0.9152912872176714,
-      "n_matched": 135
+      "tp": 137,
+      "fp": 9,
+      "fn": 9,
+      "precision": 0.9383561643835616,
+      "recall": 0.9383561643835616,
+      "f1": 0.9383561643835615,
+      "mean_mask_iou": 0.9256249811346701,
+      "n_matched": 137
     },
     "crystal": {
-      "tp": 37,
-      "fp": 15,
-      "fn": 29,
-      "precision": 0.7115384615384616,
-      "recall": 0.5606060606060606,
-      "f1": 0.6271186440677966,
-      "mean_mask_iou": 0.7501433709356009,
-      "n_matched": 37
+      "tp": 41,
+      "fp": 24,
+      "fn": 25,
+      "precision": 0.6307692307692307,
+      "recall": 0.6212121212121212,
+      "f1": 0.6259541984732825,
+      "mean_mask_iou": 0.7914623790036597,
+      "n_matched": 41
     },
     "loop_face": {
-      "tp": 143,
-      "fp": 26,
-      "fn": 29,
-      "precision": 0.8461538461538461,
-      "recall": 0.8313953488372093,
-      "f1": 0.8387096774193549,
-      "mean_mask_iou": 0.8332595270145433,
-      "n_matched": 143
+      "tp": 157,
+      "fp": 31,
+      "fn": 15,
+      "precision": 0.8351063829787234,
+      "recall": 0.9127906976744186,
+      "f1": 0.8722222222222221,
+      "mean_mask_iou": 0.8674352308419995,
+      "n_matched": 157
     },
     "ice": {
-      "tp": 3,
-      "fp": 5,
-      "fn": 37,
-      "precision": 0.375,
-      "recall": 0.075,
-      "f1": 0.12499999999999999,
-      "mean_mask_iou": 0.7736919879138792,
-      "n_matched": 3
+      "tp": 5,
+      "fp": 3,
+      "fn": 35,
+      "precision": 0.625,
+      "recall": 0.125,
+      "f1": 0.20833333333333334,
+      "mean_mask_iou": 0.7441614535204797,
+      "n_matched": 5
     },
     "needle": {
       "tp": 0,
@@ -62,14 +62,14 @@
     }
   },
   "overall": {
-    "tp": 503,
-    "fp": 78,
-    "fn": 114,
-    "precision": 0.8657487091222031,
-    "recall": 0.8152350081037277,
-    "f1": 0.8397328881469115,
-    "mean_mask_iou": 0.8654796710328908,
-    "n_matched": 503
+    "tp": 527,
+    "fp": 80,
+    "fn": 90,
+    "precision": 0.8682042833607908,
+    "recall": 0.8541329011345219,
+    "f1": 0.8611111111111112,
+    "mean_mask_iou": 0.8860734064254818,
+    "n_matched": 527
   },
   "dataset": {
     "gold_images": 203,
@@ -77,17 +77,82 @@
     "missing_predictions": 0,
     "iou_threshold": 0.5
   },
+  "environment": {
+    "host": "mx-spark-01",
+    "ultralytics": "8.4.160",
+    "torch": "2.14.0+cu130"
+  },
   "gate": {
-    "baseline": "/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
-    "f1_delta": 0.0024,
-    "mask_iou_delta": -0.0492,
-    "mask_score": 0.7056,
+    "baseline": "/home/jungfrau/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
+    "f1_delta": 0.0238,
+    "mask_iou_delta": 0.0021,
+    "mask_score": 0.7568,
     "mask_score_baseline": 0.7547,
-    "matched_only_iou_delta": -0.0215,
+    "matched_only_iou_delta": -0.0009,
     "class_f1_delta": {
-      "loop_all": -0.003,
-      "pin": -0.0104
+      "loop_all": 0.0144,
+      "pin": 0.0127
     },
-    "pass": false
+    "pass_point_rule": true,
+    "rule": "paired bootstrap",
+    "bootstrap": {
+      "frames": 203,
+      "draws": 2000,
+      "f1": {
+        "delta": 0.0238,
+        "lo": 0.0038,
+        "hi": 0.044,
+        "win": 0.987
+      },
+      "mask_score": {
+        "delta": 0.0021,
+        "lo": -0.0105,
+        "hi": 0.0142,
+        "win": 0.628
+      },
+      "per_class": {
+        "crystal": {
+          "f1": {
+            "delta": 0.0334,
+            "lo": -0.0377,
+            "hi": 0.1081,
+            "win": 0.821
+          },
+          "mask_score": {
+            "delta": 0.0047,
+            "lo": -0.0673,
+            "hi": 0.0765,
+            "win": 0.552
+          }
+        }
+      }
+    },
+    "pass": true,
+    "environment_note": "verdict computed on mx-spark-01 with candidate and baseline in one environment; the cluster's own verdict (pass=False, F1 0.8397) compared its measurement with a baseline measured on the Spark"
+  },
+  "cluster_report": {
+    "overall": {
+      "tp": 503,
+      "fp": 78,
+      "fn": 114,
+      "precision": 0.8657487091222031,
+      "recall": 0.8152350081037277,
+      "f1": 0.8397328881469115,
+      "mean_mask_iou": 0.8654796710328908,
+      "n_matched": 503
+    },
+    "gate": {
+      "baseline": "/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
+      "f1_delta": 0.0024,
+      "mask_iou_delta": -0.0492,
+      "mask_score": 0.7056,
+      "mask_score_baseline": 0.7547,
+      "matched_only_iou_delta": -0.0215,
+      "class_f1_delta": {
+        "loop_all": -0.003,
+        "pin": -0.0104
+      },
+      "pass": false
+    }
   }
 }
diff --git a/runs/2026-09-30_v3-s-640px/metrics.json b/runs/2026-09-30_v3-s-640px/metrics.json
index d1c02bf..850fd38 100644
--- a/runs/2026-09-30_v3-s-640px/metrics.json
+++ b/runs/2026-09-30_v3-s-640px/metrics.json
@@ -1,26 +1,61 @@
 {
   "overall": {
-    "tp": 503,
-    "fp": 78,
-    "fn": 114,
-    "precision": 0.8657487091222031,
-    "recall": 0.8152350081037277,
-    "f1": 0.8397328881469115,
-    "mean_mask_iou": 0.8654796710328908,
-    "n_matched": 503
+    "tp": 527,
+    "fp": 80,
+    "fn": 90,
+    "precision": 0.8682042833607908,
+    "recall": 0.8541329011345219,
+    "f1": 0.8611111111111112,
+    "mean_mask_iou": 0.8860734064254818,
+    "n_matched": 527
   },
   "gate": {
-    "baseline": "/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
-    "f1_delta": 0.0024,
-    "mask_iou_delta": -0.0492,
-    "mask_score": 0.7056,
+    "baseline": "/home/jungfrau/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
+    "f1_delta": 0.0238,
+    "mask_iou_delta": 0.0021,
+    "mask_score": 0.7568,
     "mask_score_baseline": 0.7547,
-    "matched_only_iou_delta": -0.0215,
+    "matched_only_iou_delta": -0.0009,
     "class_f1_delta": {
-      "loop_all": -0.003,
-      "pin": -0.0104
+      "loop_all": 0.0144,
+      "pin": 0.0127
     },
-    "pass": false
+    "pass_point_rule": true,
+    "rule": "paired bootstrap",
+    "bootstrap": {
+      "frames": 203,
+      "draws": 2000,
+      "f1": {
+        "delta": 0.0238,
+        "lo": 0.0038,
+        "hi": 0.044,
+        "win": 0.987
+      },
+      "mask_score": {
+        "delta": 0.0021,
+        "lo": -0.0105,
+        "hi": 0.0142,
+        "win": 0.628
+      },
+      "per_class": {
+        "crystal": {
+          "f1": {
+            "delta": 0.0334,
+            "lo": -0.0377,
+            "hi": 0.1081,
+            "win": 0.821
+          },
+          "mask_score": {
+            "delta": 0.0047,
+            "lo": -0.0673,
+            "hi": 0.0765,
+            "win": 0.552
+          }
+        }
+      }
+    },
+    "pass": true,
+    "environment_note": "verdict computed on mx-spark-01 with candidate and baseline in one environment; the cluster's own verdict (pass=False, F1 0.8397) compared its measurement with a baseline measured on the Spark"
   },
   "training": {
     "epochs_run": 228,
@@ -34,5 +69,30 @@
     "mAP50-95(M)": 0.4995
   },
   "version": "yolo26s-seg-v3-s-640px-2026-10-01",
-  "measured_at": "2026-10-01T04:18:50"
+  "measured_at": "2026-10-02T13:29:54",
+  "cluster": {
+    "overall": {
+      "tp": 503,
+      "fp": 78,
+      "fn": 114,
+      "precision": 0.8657487091222031,
+      "recall": 0.8152350081037277,
+      "f1": 0.8397328881469115,
+      "mean_mask_iou": 0.8654796710328908,
+      "n_matched": 503
+    },
+    "gate": {
+      "baseline": "/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
+      "f1_delta": 0.0024,
+      "mask_iou_delta": -0.0492,
+      "mask_score": 0.7056,
+      "mask_score_baseline": 0.7547,
+      "matched_only_iou_delta": -0.0215,
+      "class_f1_delta": {
+        "loop_all": -0.003,
+        "pin": -0.0104
+      },
+      "pass": false
+    }
+  }
 }
diff --git a/runs/2026-09-30_v3-s-640px/run.json b/runs/2026-09-30_v3-s-640px/run.json
index f1a1636..0c59ea5 100644
--- a/runs/2026-09-30_v3-s-640px/run.json
+++ b/runs/2026-09-30_v3-s-640px/run.json
@@ -2,7 +2,7 @@
   "id": "2026-09-30_v3-s-640px",
   "dataset": "dataset/2026-09-29_v3",
   "base_weights": "models/base/yolo26s-seg.pt",
-  "status": "gate_failed",
+  "status": "gate_passed",
   "created": "2026-09-30T07:17:45",
   "created_by": "jungfrau@mx-spark-01",
   "hyperparams": {
@@ -24,11 +24,11 @@
   },
   "version": "yolo26s-seg-v3-s-640px-2026-10-01",
   "metrics": {
-    "f1": 0.8397328881469115,
-    "mean_mask_iou": 0.8654796710328908,
-    "gate_pass": false,
-    "baseline": "/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
-    "measured_at": "2026-10-01T04:18:50"
+    "f1": 0.8611111111111112,
+    "mean_mask_iou": 0.8860734064254818,
+    "gate_pass": true,
+    "baseline": "/home/jungfrau/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json",
+    "measured_at": "2026-10-02T13:29:54"
   },
   "history": [
     {
@@ -60,6 +60,12 @@
       "at": "2026-10-01T04:18:50",
       "by": "duan_j@gpu102",
       "note": "{\"baseline\": \"/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json\", \"f1_delta\": 0.0024, \"mask_iou_delta\": -0.0492, \"mask_score\": 0.7056, \"mask_score_baseline\": 0.7547, \"matched_only_iou_delta\": -0.0215, \"class_f1_delta\": {\"loop_all\": -0.003, \"pin\": -0.0104}, \"pass\": false}"
+    },
+    {
+      "status": "gate_passed",
+      "at": "2026-10-02T13:29:54",
+      "by": "jungfrau@mx-spark-01",
+      "note": "re-gated on the Spark in one environment against yolo26n-seg-v3-noflip-mask1-2026-09-30 (the cluster verdict compared two environments); not promoted: four times the parameters, needs a latency check at a beamline"
     }
   ],
   "job": 232023,
diff --git a/runs/README.md b/runs/README.md
index 7e3c036..7b9dc8d 100644
--- a/runs/README.md
+++ b/runs/README.md
@@ -17,7 +17,7 @@ Generated by `python tools/ledger.py render`; do not edit by hand.
 | 2026-09-29_v3-recipeA | gate_passed | dataset/2026-09-29_v3 | models/base/yolo26n-seg.pt | yolo26n-seg-v3-recipeA-2026-09-29 | 0.831 | 0.881 | yes | 2026-09-29T23:42 |
 | 2026-09-30_v3-n-1024px | exported | dataset/2026-09-29_v3 | models/base/yolo26n-seg.pt | - | - | - | - | 2026-09-30T07:17 |
 | 2026-09-30_v3-s-1024px | exported | dataset/2026-09-29_v3 | models/base/yolo26s-seg.pt | - | - | - | - | 2026-09-30T07:17 |
-| 2026-09-30_v3-s-640px | exported | dataset/2026-09-29_v3 | models/base/yolo26s-seg.pt | - | - | - | - | 2026-09-30T07:17 |
+| 2026-09-30_v3-s-640px | gate_passed | dataset/2026-09-29_v3 | models/base/yolo26s-seg.pt | yolo26s-seg-v3-s-640px-2026-10-01 | 0.861 | 0.886 | yes | 2026-10-02T13:29 |
 | 2026-10-01_v4-noflip-mask1 | promoted | dataset/2026-10-01_v4 | models/base/yolo26n-seg.pt | yolo26n-seg-v4-noflip-mask1-2026-10-02 | 0.852 | 0.891 | yes | 2026-10-02T13:25 |
 | 2026-10-01_v4-recipeA | gate_failed | dataset/2026-10-01_v4 | models/base/yolo26n-seg.pt | yolo26n-seg-v4-recipeA-2026-10-02 | 0.832 | 0.884 | no | 2026-10-02T04:12 |
 
@@ -120,6 +120,11 @@ States: exported → queued → training → measured → gate_passed → gate_f
 ## 2026-09-30_v3-s-640px
 
 - 2026-09-30T07:17:45 · exported · jungfrau@mx-spark-01 — cluster: capacity lever, small model at 640 px, default recipe
+- 2026-10-01T01:30:13 · queued · duan_j@gpu102
+- 2026-10-01T01:30:13 · training · duan_j@gpu102 — train_run.py
+- 2026-10-01T04:18:50 · measured · duan_j@gpu102
+- 2026-10-01T04:18:50 · gate_failed · duan_j@gpu102 — {"baseline": "/data/user/duan_j/AareLC_train/models/registry/yolo26n-seg-v3-noflip-mask1-2026-09-30/gold_report.json", "f1_delta": 0.0024, "mask_iou_delta": -0.0492, "mask_score": 0.7056, "mask_score_baseline": 0.7547, "matched_only_iou_delta": -0.0215, "class_f1_delta": {"loop_all": -0.003, "pin": -0.0104}, "pass": false}
+- 2026-10-02T13:29:54 · gate_passed · jungfrau@mx-spark-01 — re-gated on the Spark in one environment against yolo26n-seg-v3-noflip-mask1-2026-09-30 (the cluster verdict compared two environments); not promoted: four times the parameters, needs a latency check at a beamline
 
 ## 2026-10-01_v4-noflip-mask1
 
diff --git a/runs/clean_gold_comparison.json b/runs/clean_gold_comparison.json
index c129dd1..8c1b80d 100644
--- a/runs/clean_gold_comparison.json
+++ b/runs/clean_gold_comparison.json
@@ -671,6 +671,73 @@
         "gold_images": 149
       }
     },
+    "2026-09-30_v3-s-640px": {
+      "per_class": {
+        "loop_all": {
+          "tp": 134,
+          "fp": 10,
+          "fn": 5,
+          "precision": 0.9305555555555556,
+          "recall": 0.9640287769784173,
+          "f1": 0.9469964664310955,
+          "mean_mask_iou": 0.8941931738466334,
+          "n_matched": 134
+        },
+        "pin": {
+          "tp": 108,
+          "fp": 6,
+          "fn": 8,
+          "precision": 0.9473684210526315,
+          "recall": 0.9310344827586207,
+          "f1": 0.9391304347826087,
+          "mean_mask_iou": 0.9198485953616634,
+          "n_matched": 108
+        },
+        "crystal": {
+          "tp": 21,
+          "fp": 14,
+          "fn": 19,
+          "precision": 0.6,
+          "recall": 0.525,
+          "f1": 0.56,
+          "mean_mask_iou": 0.7742300919117516,
+          "n_matched": 21
+        },
+        "loop_face": {
+          "tp": 110,
+          "fp": 26,
+          "fn": 10,
+          "precision": 0.8088235294117647,
+          "recall": 0.9166666666666666,
+          "f1": 0.859375,
+          "mean_mask_iou": 0.8632894169651606,
+          "n_matched": 110
+        },
+        "ice": {
+          "tp": 2,
+          "fp": 1,
+          "fn": 8,
+          "precision": 0.6666666666666666,
+          "recall": 0.2,
+          "f1": 0.30769230769230765,
+          "mean_mask_iou": 0.8091053257565746,
+          "n_matched": 2
+        }
+      },
+      "overall": {
+        "tp": 375,
+        "fp": 57,
+        "fn": 50,
+        "precision": 0.8680555555555556,
+        "recall": 0.8823529411764706,
+        "f1": 0.8751458576429405,
+        "mean_mask_iou": 0.8853450987795626,
+        "n_matched": 375
+      },
+      "dataset": {
+        "gold_images": 149
+      }
+    },
     "2026-10-01_v4-noflip-mask1": {
       "per_class": {
         "loop_all": {
@@ -804,73 +871,6 @@
       "dataset": {
         "gold_images": 149
       }
-    },
-    "yolo26s-seg-v3-s-640px-2026-10-01": {
-      "per_class": {
-        "loop_all": {
-          "tp": 134,
-          "fp": 10,
-          "fn": 5,
-          "precision": 0.9305555555555556,
-          "recall": 0.9640287769784173,
-          "f1": 0.9469964664310955,
-          "mean_mask_iou": 0.8941931738466334,
-          "n_matched": 134
-        },
-        "pin": {
-          "tp": 108,
-          "fp": 6,
-          "fn": 8,
-          "precision": 0.9473684210526315,
-          "recall": 0.9310344827586207,
-          "f1": 0.9391304347826087,
-          "mean_mask_iou": 0.9198485953616634,
-          "n_matched": 108
-        },
-        "crystal": {
-          "tp": 21,
-          "fp": 14,
-          "fn": 19,
-          "precision": 0.6,
-          "recall": 0.525,
-          "f1": 0.56,
-          "mean_mask_iou": 0.7742300919117516,
-          "n_matched": 21
-        },
-        "loop_face": {
-          "tp": 110,
-          "fp": 26,
-          "fn": 10,
-          "precision": 0.8088235294117647,
-          "recall": 0.9166666666666666,
-          "f1": 0.859375,
-          "mean_mask_iou": 0.8632894169651606,
-          "n_matched": 110
-        },
-        "ice": {
-          "tp": 2,
-          "fp": 1,
-          "fn": 8,
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@@ -1546,6 +1546,73 @@
         "gold_images": 149
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@@ -1679,73 +1746,6 @@
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   },
   "active": "yolo26n-seg-v4-noflip-mask1-2026-10-02",
@@ -2070,6 +2070,38 @@
         }
       }
     },
+    "2026-09-30_v3-s-640px": {
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+      "draws": 2000,
+      "f1": {
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     "2026-10-01_v4-recipeA": {
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       "draws": 2000,
@@ -2101,38 +2133,6 @@
           }
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   }
 }
\ No newline at end of file