diff --git a/daq/docs/conf.py b/daq/docs/conf.py
index 4081a2bd..6bda2eb3 100644
--- a/daq/docs/conf.py
+++ b/daq/docs/conf.py
@@ -11,8 +11,8 @@ import sys
 # Add project root to Python path so autodoc can import modules
 sys.path.insert(0, os.path.abspath('..'))
 sys.path.insert(0, os.path.abspath('../src'))  # <-- ensure 'src' is on path
-#sys.path.insert(0, os.path.abspath('../gui/src'))
-#sys.path.insert(0, os.path.abspath('../common/src'))
+sys.path.insert(0, os.path.abspath('../src/aaredaq'))
+sys.path.insert(0, os.path.abspath('../src/mxlibs3'))
 
 project = 'AareDAQ'
 copyright = '2025, Paul Scherrer Institute'
diff --git a/daq/docs/index.rst b/daq/docs/index.rst
index a206f065..40f6181d 100644
--- a/daq/docs/index.rst
+++ b/daq/docs/index.rst
@@ -18,9 +18,8 @@ Welcome to AareDAQ's documentation!
    :maxdepth: 4
    :caption: OpenAPI Python client
 
-   modules/daq.src
-   modules/gui.src
-   modules/common.src
+   modules/src.aaredaq
+   modules/src.mxlibs3
 
 Indices and tables
 ==================