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6f89d400917adabdd2326cdffc4546da6e6a510c
sicspsi/nxsans.c
cvs ae8ee2f28e - Fixes to NXscript 
- Added Pause and Continue commands
- Fixed simulation counter to deal properly with pause
- Fixed nxdict HDF5 problem
2004-01-09 14:45:38 +00:00

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22 KiB
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/*--------------------------------------------------------------------------
N X S A N S
a module of utility functions which serve to write Nexus
data files for SANS.
Mark Koennecke, August 1997 - November 1998
Updated to support the larger detector resolution and possible
TOF and stroboscopic modes, Mark Koennecke, February 2001
Added additional monitors for stroboscopic gummi mode,
Mark Koennecke, September 2002
Copyright:
Labor fuer Neutronenstreuung
Paul Scherrer Institut
CH-5423 Villigen-PSI
The authors hereby grant permission to use, copy, modify, distribute,
and license this software and its documentation for any purpose, provided
that existing copyright notices are retained in all copies and that this
notice is included verbatim in any distributions. No written agreement,
license, or royalty fee is required for any of the authorized uses.
Modifications to this software may be copyrighted by their authors
and need not follow the licensing terms described here, provided that
the new terms are clearly indicated on the first page of each file where
they apply.
IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY
FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES
ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY
DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES,
INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT. THIS SOFTWARE
IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE
NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR
MODIFICATIONS.
----------------------------------------------------------------------------*/
#include <string.h>
#include <stdlib.h>
#include <assert.h>
#include <time.h>
#include "fortify.h"
#include "sics.h"
#include "sicsvar.h"
#include "napi.h"
#include "nxdict.h"
#include "modriv.h"
#include "motor.h"
#include "nxutil.h"
#include "nxdata.h"
#include "countdriv.h"
#include "counter.h"
#include "danu.h"
#include "HistMem.h"
#include "velo.h"
#include "sps.h"
#include "udpquieck.h"
#include "mumo.h"
#include "sanswave.h"
#define HISTNAME "banana"
#define SAMPLETABLE "sampletable"
static int gummiFlag = 0; /* a flag indicating stroboscopic, or gummi mode */
/*-----------------------------------------------------------------------*/
static void SNError(void *pData, char *text)
{
SConnection *pCon;
assert(pData);
pCon = (SConnection *)pData;
SCWrite(pCon,text,eError);
}
/*-------------------------------------------------------------------------*/
NXhandle SNXStartSANS(SConnection *pCon, SicsInterp *pSics)
{
NXhandle pFile = NULL;
char *filename = NULL;
pSicsVariable pVar = NULL;
int iStat;
char pBueffel[512];
/* get a filename */
filename = SNXMakeFileName(pSics,pCon);
if(!filename)
{
return NULL;
}
/* create a Nexus file */
NXopen(filename,NXACC_CREATE,&pFile);
if(!pFile)
{
SCWrite(pCon,"ERROR: cannot create data file ",eError);
return NULL;
}
/* tell Uwe User what we are doing */
sprintf(pBueffel,"Writing %s ......",filename);
SCWrite(pCon,pBueffel,eWarning);
/* store global attributes */
iStat = NXputattr(pFile,"file_name",filename,
strlen(filename)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing file_name attribute to Nexus file",eError);
}
/* throw away filename, no longer needed */
free(filename);
/* write creation time */
SNXFormatTime(pBueffel,512);
iStat = NXputattr(pFile,"file_time",pBueffel,
strlen(pBueffel)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing date attribute to Nexus file",eError);
}
pVar = FindVariable(pSics,"instrument");
if(pVar)
{
iStat = NXputattr(pFile,"instrument",pVar->text,
strlen(pVar->text)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing instrument attribute to Nexus file",eError);
}
}
pVar = NULL;
pVar = FindVariable(pSics,"user");
if(pVar)
{
iStat = NXputattr(pFile,"owner",pVar->text,
strlen(pVar->text)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing owner attribute to Nexus file",eError);
}
}
pVar = NULL;
pVar = FindVariable(pSics,"adress");
if(pVar)
{
iStat = NXputattr(pFile,"owner_adress",pVar->text,
strlen(pVar->text)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing owner_adress attribute to Nexus file",eError);
}
}
pVar = NULL;
pVar = FindVariable(pSics,"phone");
if(pVar)
{
iStat = NXputattr(pFile,"owner_telephone_number",pVar->text,
strlen(pVar->text)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing owner_telephone_number attribute to Nexus file",eError);
}
}
pVar = NULL;
pVar = FindVariable(pSics,"fax");
if(pVar)
{
iStat = NXputattr(pFile,"owner_fax_number",pVar->text,
strlen(pVar->text)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing owner_fax_number attribute to Nexus file",eError);
}
}
pVar = NULL;
pVar = FindVariable(pSics,"email");
if(pVar)
{
iStat = NXputattr(pFile,"owner_email",pVar->text,
strlen(pVar->text)+1,NX_CHAR);
if(iStat == NX_ERROR)
{
SCWrite(pCon,"ERROR: writing owner_email attribute to Nexus file",eError);
}
}
pVar = NULL;
return pFile;
}
/*--------------------------------------------------------------------------*/
int SNMakeSANS(SConnection *pCon, SicsInterp *pSics, NXdict pDict)
{
NXhandle Nfil = NULL;
char pBueffel[512];
float fVal;
int iVal, iSet;
int iAxis[256];
int i, iRet;
long lVal;
HistInt *lData = NULL;
const float *fTime = NULL;
CommandList *pCom = NULL;
pHistMem self = NULL;
CounterMode eMode;
pVelSel pVelo = NULL;
pSPS pSiem = NULL;
const char *pNamPos = NULL;
float fRot, fTilt, fLambda;
pDummy pDum;
pIDrivable pDrive;
int iDim[MAXDIM], nDim, histSize,iStart;
/* start file */
Nfil = SNXStartSANS(pCon,pSics);
if(!Nfil)
{
return 0;
}
/*
during all this, no extensive error checking will be done,
just write the error and continue, save at all cost
*/
/* put all this global information */
SNXSPutVariable(pSics,pCon,Nfil,pDict,"etitle","title");
SNXSPutVariable(pSics,pCon,Nfil,pDict,"etime","starttime");
SNXFormatTime(pBueffel,511);
NXDputalias(Nfil,pDict,"endtime",pBueffel);
strcpy(pBueffel,"SANS at SINQ,PSI");
NXDputalias(Nfil,pDict,"iname",pBueffel);
strcpy(pBueffel,"SINQ at PSI,Villigen, Switzerland");
NXDputalias(Nfil,pDict,"sname",pBueffel);
strcpy(pBueffel,"Spallation");
NXDputalias(Nfil,pDict,"stype",pBueffel);
/* put the velocity selector data */
NXDputalias(Nfil,pDict,"vname","Dornier Velocity Selector");
fRot = 0.;
fTilt = 0.;
pCom = FindCommand(pSics,"nvs");
if(pCom)
{
pVelo = (pVelSel)pCom->pData;
if(!pVelo)
{
SCWrite(pCon,"WARNING: Velocity Selctor not found",eWarning);
}
iRet = VSGetRotation(pVelo,&fVal);
if(!iRet)
{
SCWrite(pCon,"WARNING: failed to read velocity selector speed",
eWarning);
}
else
{
fRot = fVal;
NXDputalias(Nfil,pDict,"vrot",&fVal);
}
iRet = VSGetTilt(pVelo,&fTilt);
if(!iRet)
{
SCWrite(pCon,"WARNING: failed to read velocity selector tilt angle",eWarning);
}
}
SNXSPutMotor(pSics,pCon,Nfil,pDict,"vtilt","tilt");
CalculateLambda(fRot, fTilt, &fLambda);
NXDputalias(Nfil,pDict,"vlambda",&fLambda);
/* monitor 1 */
pCom = FindCommand(pSics,HISTNAME);
if(!pCom)
{
sprintf(pBueffel,"ERROR: histogram memory %s not found",HISTNAME);
SCWrite(pCon,pBueffel,eError);
return 0;
}
self = (pHistMem)pCom->pData;
assert(self);
lVal = GetHistMonitor(self,0,pCon);
iVal = (int)lVal;
NXDputalias(Nfil,pDict,"m1counts",&iVal);
lVal = GetHistMonitor(self,4,pCon);
iVal = (int)lVal;
NXDputalias(Nfil,pDict,"pbcounts",&iVal);
/* the collimator */
pCom = FindCommand(pSics,"sps2");
if(!pCom)
{
SCWrite(pCon,"WARNING: sps-unit for reading collimator NOT found",
eWarning);
}
else
{
pSiem = (pSPS)pCom->pData;
if(!pSiem)
{
SCWrite(pCon,"WARNING: sps-unit for reading collimator NOT found",
eWarning);
}
else
{
iRet = SPSGetSANS(pSiem,&fVal);
if(iRet <= 0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
NXDputalias(Nfil,pDict,"colli",&fVal);
}
/* as we got the sps, get the attenuator as well */
iRet = SPSGetStatus(pSiem,38,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 0;
}
}
iRet = SPSGetStatus(pSiem,39,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 1;
}
}
iRet = SPSGetStatus(pSiem,40,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 2;
}
}
iRet = SPSGetStatus(pSiem,41,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 3;
}
}
iRet = SPSGetStatus(pSiem,42,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 4;
}
}
iRet = SPSGetStatus(pSiem,43,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 5;
}
}
NXDputalias(Nfil,pDict,"atti",&iVal);
}
}
/* the sample */
SNXSPutVariable(pSics,pCon,Nfil,pDict,"san","sample");
SNXSPutVariable(pSics,pCon,Nfil,pDict,"saenv","environment");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"sax","sax");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"say","say");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"saz","saz");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"saxn","sax");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"sayn","say");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"sazn","saz");
/* goniometer */
SNXSPutMotor(pSics,pCon,Nfil,pDict,"gphi","gphi");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"gtheta","gtheta");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"gphin","gphi");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"gthetan","gtheta");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"saom","som");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"saomn","som");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"sapos","spos");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"saposn","spos");
pCom = FindCommand(pSics,SAMPLETABLE);
if(pCom)
{
if(pCom->pData)
{
pNamPos = FindNamPos((pMulMot)pCom->pData,pCon);
if(pNamPos)
{
NXDputalias(Nfil,pDict,"sanampos",(char *)pNamPos);
}
}
}
/* write sample environment here */
pCom = FindCommand(pSics,"temperature");
if(pCom)
{
pDum = (pDummy)pCom->pData;
pDrive = pDum->pDescriptor->GetInterface(pDum,DRIVEID);
if(pDrive) /* a proper environment device */
{
fVal = pDrive->GetValue(pDum,pCon);
NXDputalias(Nfil,pDict,"satemp",&fVal);
}
}
pCom = FindCommand(pSics,"magnet");
if(pCom)
{
pDum = (pDummy)pCom->pData;
pDrive = pDum->pDescriptor->GetInterface(pDum,DRIVEID);
if(pDrive) /* a proper environment device */
{
fVal = pDrive->GetValue(pDum,pCon);
NXDputalias(Nfil,pDict,"samag",&fVal);
}
}
/* magnet motors. This instrument has motorized magnets crawling
through the hall */
pCom = FindCommand(pSics,"mom");
if(pCom)
{
SNXSPutMotor(pSics,pCon,Nfil,pDict,"mom","mom");
}
pCom = FindCommand(pSics,"mz");
if(pCom)
{
SNXSPutMotor(pSics,pCon,Nfil,pDict,"mz","mz");
}
/* put Beam Stop */
/* read beamstop number */
iVal = 1;
pCom = FindCommand(pSics,"sps1");
if(!pCom)
{
SCWrite(pCon,"WARNING: sps-unit for reading beamstop NOT found",eWarning);
}
else
{
pSiem = (pSPS)pCom->pData;
if(!pSiem)
{
SCWrite(pCon,"WARNING: sps-unit for reading beamstop NOT found",eWarning);
}
else
{
iRet = SPSGetStatus(pSiem,8,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 2;
}
}
iRet = SPSGetStatus(pSiem,9,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 3;
}
}
iRet = SPSGetStatus(pSiem,10,&iSet);
if(iRet <0)
{
SCWrite(pCon,"WARNING: Failed to read SPS",eWarning);
}
else
{
if(iSet)
{
iVal = 4;
}
}
}
}
NXDputalias(Nfil,pDict,"bst",&iVal);
SNXSPutMotor(pSics,pCon,Nfil,pDict,"vsx","BeamStopX");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"vsy","BeamStopY");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"vsxnull","BeamStopX");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"vsynull","BeamStopY");
/* what this is all about: the detector */
SNXSPutMotor(pSics,pCon,Nfil,pDict,"ddx","DetectorX");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"ddy","DetectorY");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"ddxn","DetectorX");
SNXSPutMotorNull(pSics,pCon,Nfil,pDict,"ddyn","DetectorY");
SNXSPutMotor(pSics,pCon,Nfil,pDict,"ddchi","DetectorRotation");
pCom = FindCommand(pSics,HISTNAME);
if(!pCom)
{
sprintf(pBueffel,"ERROR: histogram memory %s not found",HISTNAME);
SCWrite(pCon,pBueffel,eError);
return 0;
}
self = (pHistMem)pCom->pData;
assert(self);
eMode = GetHistCountMode(self);
if(eMode == eTimer)
{
strcpy(pBueffel,"Timer");
}
else
{
strcpy(pBueffel,"Monitor");
}
NXDputalias(Nfil,pDict,"ddm",pBueffel);
fVal = GetHistPreset(self);
NXDputalias(Nfil,pDict,"ddp",&fVal);
lVal = GetHistMonitor(self,1,pCon);
iVal = (int)lVal;
NXDputalias(Nfil,pDict,"ddmo",&iVal);
fVal = GetHistCountTime(self,pCon);
NXDputalias(Nfil,pDict,"ddtime",&fVal);
/*
Deal with actual histogram. Due to stroboscopic modes and the
new detector electronics we need to find out about the size
ourselves now. And possibly write time binning information.
*/
GetHistDim(self, iDim,&nDim);
/*
handle time binning
*/
fTime = GetHistTimeBin(self,&iVal);
if(iVal > 2)
{
NXDputalias(Nfil,pDict,"ddtb",(void *)fTime);
nDim = 3;
iDim[2] = iVal;
}
histSize = 1;
for(i = 0; i < nDim; i++)
{
histSize *= iDim[i];
}
lData = (HistInt *)malloc(histSize*sizeof(HistInt));
if(!lData)
{
SCWrite(pCon,"ERROR: out of memory, FAILED to store data, file corrupt",
eError);
NXclose(&Nfil);
return 0;
}
GetHistogram(self,pCon,0,0,histSize,lData,histSize*sizeof(HistInt));
sprintf(pBueffel," %d ",iDim[0]);
NXDupdate(pDict,"dim1",pBueffel);
sprintf(pBueffel," %d ",iDim[1]);
NXDupdate(pDict,"dim2",pBueffel);
if(nDim == 2)
{
sprintf(pBueffel," -rank 2 -dim {%d,%d} ", iDim[0], iDim[1]);
NXDupdate(pDict,"countdim",pBueffel);
}
else if (nDim == 3)
{
sprintf(pBueffel," -rank 3 -dim {%d,%d,%d} ", iDim[0], iDim[1],
iDim[2]);
NXDupdate(pDict,"countdim",pBueffel);
sprintf(pBueffel," %d ",iDim[2]);
NXDupdate(pDict,"timedim",pBueffel);
}
NXDputalias(Nfil,pDict,"ddcounts",lData);
free(lData);
/* write x and y axis */
for(i = 0; i < iDim[0]; i++)
{
iAxis[i] = i;
}
NXDputalias(Nfil,pDict,"ddcx",iAxis);
for(i = 0; i < iDim[1]; i++)
{
iAxis[i] = i;
}
NXDputalias(Nfil,pDict,"ddcy",iAxis);
/*
write gummi monitors when apropriate
*/
if(nDim == 3 && gummiFlag != 0)
{
histSize = 3*iDim[2];
lData = (HistInt *)malloc(histSize*sizeof(HistInt));
if(lData == NULL)
{
SCWrite(pCon,"WARNING: failed to allocate memory for monitors",
eWarning);
} else {
memset(lData,0,histSize*sizeof(HistInt));
iStart = iDim[0]*iDim[1]*iDim[2];
GetHistogramDirect(self,pCon,0,iStart,iStart+histSize,
lData,histSize*sizeof(HistInt));
NXDputalias(Nfil,pDict,"gummimon1",lData);
NXDputalias(Nfil,pDict,"gummimon2",lData+iDim[2]);
NXDputalias(Nfil,pDict,"gummimon3",lData+2*iDim[2]);
free(lData);
}
}
/*
write detector temperature. It is a hot one............
*/
if(pSiem)
{
iRet = SPSGetADC(pSiem,1,&iVal);
if(iRet)
{
fVal = iVal/269.9;
NXDputalias(Nfil,pDict,"ddtemp",&fVal);
}
}
/* do the linking in th data vgroup */
NXDaliaslink(Nfil,pDict,"dan","ddcounts");
NXDaliaslink(Nfil,pDict,"dan","ddcx");
NXDaliaslink(Nfil,pDict,"dan","ddcy");
NXDaliaslink(Nfil,pDict,"dan","ddmo");
NXDaliaslink(Nfil,pDict,"dan","vlambda");
if(nDim == 3)
{
NXDaliaslink(Nfil,pDict,"dan","ddtb");
}
/* send quieck message for automatic copying*/
i = 131;
iVal = NX_CHAR;
NXgetattr(Nfil,"file_name",pBueffel,&i,&iVal);
SendQuieck(QUIECK,pBueffel);
/* close this and go ............. */
NXclose(&Nfil);
return 1;
}
/*------------------- The Mechanics for setting Up ------------------------*/
typedef struct {
pObjectDescriptor pDes;
NXdict pDict;
} DictStruct, *pDictStruct;
/*-------------------------------------------------------------------------*/
static pDictStruct MakeDictStruct(char *pFile)
{
pDictStruct pNew = NULL;
int iRet;
pNew = (pDictStruct)malloc(sizeof(DictStruct));
if(!pNew)
{
return NULL;
}
memset(pNew,0,sizeof(DictStruct));
pNew->pDes = CreateDescriptor("StoreData");
if(!pNew->pDes)
{
free(pNew);
return NULL;
}
iRet = NXDinitfromfile(pFile,&(pNew->pDict));
if(iRet != NX_OK)
{
DeleteDescriptor(pNew->pDes);
free(pNew);
return NULL;
}
return pNew;
}
/*--------------------------------------------------------------------------*/
static void KillDictStruct(void *pData)
{
pDictStruct self = NULL;
self = (pDictStruct)pData;
assert(self);
if(self->pDes)
{
DeleteDescriptor(self->pDes);
}
if(self->pDict)
{
NXDclose(self->pDict,NULL);
}
free(self);
}
/*--------------------------------------------------------------------------*/
int SNStoreSANS(SConnection *pCon, SicsInterp *pSics, void *pData, int argc,
char *argv[])
{
char pBueffel[80];
pDictStruct self = NULL;
self = (pDictStruct)pData;
assert(self);
assert(pCon);
assert(pSics);
if(argc > 1){
strtolower(argv[1]);
if(strcmp(argv[1],"gummi") == 0){
if(argc > 2){
if(!SCMatchRights(pCon,usMugger)){
return 0;
}
gummiFlag = atoi(argv[2]);
SCSendOK(pCon);
return 1;
} else
{
sprintf(pBueffel,"%s.gummi = %d",argv[0], gummiFlag);
SCWrite(pCon,pBueffel,eValue);
return 1;
}
}
}
return SNMakeSANS(pCon,pSics,self->pDict);
}
/*--------------------------------------------------------------------------*/
int InitSANS(SConnection *pCon, SicsInterp *pSics, void *pData,
int argc, char *argv[])
{
pDictStruct pNew = NULL;
char pBueffel[512];
if(argc < 2)
{
SCWrite(pCon,"ERROR: not enough arguments for IniSANS",eError);
return 0;
}
pNew = MakeDictStruct(argv[1]);
if(!pNew)
{
sprintf(pBueffel,"ERROR: failed to initialise NXDDL from file %s",
argv[1]);
SCWrite(pCon,pBueffel,eError);
return 0;
}
AddCommand(pSics,"StoreData",SNStoreSANS,KillDictStruct,pNew);
return 1;
}
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