Initial revision
This commit is contained in:
123
doc/user/mesure.htm
Normal file
123
doc/user/mesure.htm
Normal file
@ -0,0 +1,123 @@
|
||||
<HTML>
|
||||
<HEAD>
|
||||
<TITLE>Four Circle Diffractometer Measurements in Single Counter Mode</TITLE>
|
||||
</HEAD>
|
||||
<BODY>
|
||||
<H1>Reflection List Processor</H1>
|
||||
<P>
|
||||
This section describes the means for doing a standard single counter four
|
||||
circle diffractometer measurement with SICS. A prerequisite for that is a
|
||||
file with a list of reflections to measure. This is a simple file with
|
||||
three floating point values per line giving the HKL of the reflection to
|
||||
measure. Do not forget to put standard reflections into that file any now
|
||||
and then. Another prerequisite is, that the UB-matrix had been determined
|
||||
beforehand and that SICS has the updated values. Also check the value of
|
||||
lambda in the hkl-object.
|
||||
</P>
|
||||
<p>
|
||||
The measurement procedure is rather simple: If a reflection is accessible
|
||||
the diffractometer is positioned on that reflection. Then a scan is done for
|
||||
the reflection and data written to file. The scans all run with a fixed scan
|
||||
widths, counter preset and countmode. There is a choice of omega scan or
|
||||
omega two theta scan. It is known that there are more sophisticated
|
||||
measurement schemes for four circle diffraction, but as TRICS is only
|
||||
temporarily operated with a single counter not much optimisation seemed
|
||||
necessary.
|
||||
</p>
|
||||
<p>
|
||||
Three files will be written starting from a root such as tricsnumberyear.
|
||||
For instance trics05601998 means file number 560 in 1998. The file ending in
|
||||
.log will contain the console log. This is extremely verbose. Another file
|
||||
ending with .col will contain the reflection, diffractometer settings and
|
||||
the measured profile. The third file, ending with .rfl will contain for each
|
||||
refelction, the HKL, the diffractometer settings and the intensity and sigma
|
||||
intensity as calculated by the SICS internal integration routine. It does
|
||||
a Grant Gabe integration (see J.Appl. Cryst (1978), 11, 114-120).
|
||||
</p>
|
||||
<p>
|
||||
For the purpose of the command description it is assumed, that this facility
|
||||
is accessible as object mess within SICS.
|
||||
Interaction with this object happens through the following commands:
|
||||
<dl>
|
||||
<DT>mess start
|
||||
<DD>Creates a new set of files and writes some header info.
|
||||
<DT>mess measure filename iSkip
|
||||
<DD>Starts a measurement. Reads reflections from the file filename. iSkip is
|
||||
an optional parameter which allows to skip iSkip lines in the file. This
|
||||
is for recovery in cases of accidental or purposeful interruption
|
||||
of the measurement.
|
||||
<DT>mess genlist filename iSkip
|
||||
<DD>Mesures reflection from filename. The file is expected to have been
|
||||
created by hklgen and to include all the angle settings. The optional
|
||||
parameter iSkip determines the number of lines to skip in the file. This
|
||||
feature allows to continue measurement on not fully processed files.
|
||||
<DT>mess reopen filename
|
||||
<DD>Reopens an already existing file set for appending. Only the file root
|
||||
without directory info or endings needs to be given.
|
||||
<DT>mess close
|
||||
<DD>Closes the current data file set.
|
||||
<DT>mess file
|
||||
<DD>Prints the current data file name.
|
||||
</dl>
|
||||
Then there are a few parameter commands. They follow the general scheme:
|
||||
<dl>
|
||||
<DT>mess parameter
|
||||
<DD>Prints the current value of the parameter
|
||||
<DT>mess parameter value
|
||||
<DD>Sets the parameter to the new value.
|
||||
</dl>
|
||||
This object knows about the following parameters:
|
||||
<dl>
|
||||
<DT>countmode
|
||||
<DD>The counting mode to use. Possible values are timer or monitor.
|
||||
<DT>preset
|
||||
<DD>The preset to use for counting
|
||||
<DT>mode
|
||||
<DD>The measurement mode. Posssible values are omega for omega scans and
|
||||
omega2theta for omega two theta scans.
|
||||
<DT>np
|
||||
<DD>number of points to collect for each profile.
|
||||
<DT>step
|
||||
<DD>The step width in omega to use for scanning.
|
||||
<DT>compact
|
||||
<DD>Determines if the scan data output to the SICS is in normal
|
||||
(compact = 0) or condensed (compact = 1) form. The default is 1.
|
||||
</dl>
|
||||
</p>
|
||||
<p>
|
||||
mess supports two geometries: the first is the usual bisecting geometry. The
|
||||
second is the normal beam geometry where the detector is moved out of plane.
|
||||
This si accounted for by two switches:
|
||||
<dl>
|
||||
<dt>mess bi
|
||||
<dd>switches into bissectiong mode. This is the default.
|
||||
<dt>mess nb
|
||||
<dd>switches into normal beam mode.
|
||||
</dl>
|
||||
</p>
|
||||
<p>
|
||||
This object supports some file management functionality. It caters
|
||||
for the problem that experiments may need to be continued. Thus reopening
|
||||
files and continuation of reflection processing at a point way down the
|
||||
reflection file is supported. Consequently the start of a new experiment
|
||||
requires the following steps:
|
||||
<ul>
|
||||
<li>Create a new set of files with <b>mess start</b>.
|
||||
<li>Configure the scans with the parameter commands.
|
||||
<li>Start processing a reflection file with either the <b>mess genlist</b>
|
||||
or <b>mess measure</b> commands.
|
||||
</ul>
|
||||
If you need to continue reflection file processing after an abort or after
|
||||
solving a problem the following steps are required:
|
||||
<ul>
|
||||
<li>Determine the file number you were working at and the line number in the
|
||||
reflection file where you wish to continue processing.
|
||||
<li>Set the file root with the <b>mess reopen</b> command.
|
||||
<li>Configure the scan parameters again.
|
||||
<li>Restart the measurement with either <b> mess genlist</b> or <b> mess
|
||||
measure</b> but specify the iSkip parameter according to the position in
|
||||
the reflection file where processing should continue.
|
||||
</ul>
|
||||
</p>
|
||||
</BODY>
|
||||
</HTML>
|
Reference in New Issue
Block a user