add cleanup.bash

compress_logger/compress.py

@@ -87,6 +87,13 @@ def treat(action, instrument='', years='past', vars=None):
             yrs.remove(time.strftime("%Y"))
         except ValueError:
             pass
+    elif years == 'auto':
+        os.chdir(gzbase)
+        yrs = []
+        for year in glob('20*'):
+            if not os.path.exists(f'../logger/{year}.tar.lz4'):
+                yrs.append(year)
+        os.chdir(logbase)
     else:
         yrs = years
     for year in yrs:
@@ -95,7 +102,11 @@ def treat(action, instrument='', years='past', vars=None):
         if action == COMPRESS:
             os.chdir(logdir)
         else:
-            os.chdir(gzdir)
+            try:
+                os.chdir(gzdir)
+            except Exception as e:
+                print(e)
+                continue
         if not vars:
             varlist = list(glob('*'))
         else:
@@ -145,8 +156,8 @@ if __name__ == '__main__':
         else:
             addto.append(opt)
     if len(years) == 0:
-        years = 'past'
-    if years not in ('past', 'all'):
+        years = 'auto'
+    if years not in ('past', 'all', 'auto'):
         for year in years:
             assert(2007 <= int(year) <= 2030)
     if len(instruments) == 0: