frappy/frappy_mlz/seop.py
Markus Zolliker aa7910c28c update to gerrit version
Change-Id: Ifdaa28dd961a529cd9197c4c3639744f108b0a6a
2023-10-16 17:49:19 +02:00

235 lines
8.2 KiB
Python

# -*- coding: utf-8 -*-
# *****************************************************************************
#
# This program is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later
# version.
#
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program; if not, write to the Free Software Foundation, Inc.,
# 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
# Module authors:
# Georg Brandl <g.brandl@fz-juelich.de>
# Alexander Zaft <a.zaft@fz-juelich.de>
#
# *****************************************************************************
"""Adapter to the existing SEOP 3He spin filter system daemon."""
from os import path
# eventually he3control
from he3d import he3cell # pylint: disable=import-error
from frappy.core import Attached
from frappy.datatypes import ArrayOf, FloatRange, IntRange, StatusType, \
StringType, TupleOf
from frappy.errors import CommandRunningError
from frappy.modules import Command, Drivable, Module, Parameter, Property, \
Readable
from frappy.rwhandler import CommonReadHandler
integral = IntRange()
floating = FloatRange()
string = StringType()
# Configuration is kept in YAML files to stay compatible to the
# traditional 3He daemon, for now.
class Cell(Module):
""" Dummy module for creating He3Cell object in order for other modules to talk to the hardware.
Only deals with the config, and rotating the paramlog.
"""
config_directory = Property(
'Directory for the YAML config files', datatype=string)
def initModule(self):
super().initModule()
self.cell = he3cell.He3_cell(
path.join(self.config_directory, 'cell.yml'))
# Commands
@Command(result=string)
def raw_config_file(self):
"""return unparsed contents of yaml file"""
with open(self.cell._He3_cell__cfg_filename, 'r', encoding='utf-8') as f:
return str(f.read())
@Command(string, result=string)
def cfg_get(self, identifier):
"""Get a configuration value."""
return str(self.cell.cfg_get(identifier))
@Command((string, string), result=string)
def cfg_set(self, identifier, value):
"""Set a configuration value."""
try:
value = int(value)
except ValueError:
try:
value = float(value)
except ValueError:
pass
# The type is lost during transmission.
# Check type so the value to be set has the same type and
# is not eg. a string where an int would be needed in the config key.
oldty = type(self.cell.cfg_get(identifier))
if oldty is not type(value):
raise ValueError('Type of value to be set does not match the '
'value in the configuration!')
return str(self.cell.cfg_set(identifier, value))
@Command()
def nmr_paramlog_rotate(self):
"""resets fitting and switches to a new logfile"""
self.cell.nmr_paramlog_rotate()
class Afp(Readable):
"""Polarisation state of the SEOP waveplates"""
value = Parameter('Current polarisation state of the SEOP waveplates', IntRange(0, 1))
cell = Attached(Cell)
def read_value(self):
return self.cell.cell.afp_state_get()
# Commands
@Command(description='Flip polarization of SEOP waveplates')
def afp_flip(self):
self.cell.cell.afp_flip_do()
self.read_value()
class Nmr(Readable):
Status = Drivable.Status
status = Parameter(datatype=StatusType(Drivable.Status))
value = Parameter('Timestamp of last NMR', string)
cell = Attached(Cell)
def initModule(self):
super().initModule()
self.interval = 0
def read_value(self):
return str(self.cell.cell.nmr_timestamp_get())
def read_status(self):
cellstate = self.cell.cell.nmr_state_get()
if self.cell.cell.nmr_background_check():
status = self.Status.BUSY, 'running every %d seconds' % self.interval
else:
status = self.Status.IDLE, 'not running'
# TODO: what do we do here with None and -1?
# -> None basically indicates that the fit for the parameters did not converge
if cellstate is None:
return self.Status.IDLE, f'returned None, {status[1]}'
if cellstate in (0, 1):
return status[0], f'nmr cellstate {cellstate}, {status[1]}'
if cellstate == -1:
return self.Status.WARN, f'got error from cell, {status[1]}'
return self.Status.ERROR, 'Unrecognized cellstate!'
# Commands
@Command()
def nmr_do(self):
"""Triggers the NMR to run"""
self.cell.cell.nmr_do()
self.read_status()
@Command()
def bgstart(self):
"""Start background NMR"""
if self.isBusy():
raise CommandRunningError('backgroundNMR is already running')
interval = self.cell.cell.cfg_get('tasks/nmr/background/interval')
self.interval = interval
self.cell.cell.nmr_background_start(interval)
self.read_status()
@Command()
def bgstop(self):
"""Stop background NMR"""
self.cell.cell.nmr_background_stop()
self.read_status()
# Commands to get large datasets we do not want directly in the NICOS cache
@Command(result=TupleOf(ArrayOf(floating, maxlen=100000),
ArrayOf(floating, maxlen=100000)))
def get_processed_nmr(self):
"""Get data for processed signal."""
val= self.cell.cell.nmr_processed_get()
return (val['xval'], val['yval'])
@Command(result=TupleOf(ArrayOf(floating, maxlen=100000),
ArrayOf(floating, maxlen=100000)))
def get_raw_nmr(self):
"""Get raw signal data."""
val = self.cell.cell.nmr_raw_get()
return (val['xval'], val['yval'])
@Command(result=TupleOf(ArrayOf(floating, maxlen=100000),
ArrayOf(floating, maxlen=100000)))
def get_raw_spectrum(self):
"""Get the raw spectrum."""
val = self.cell.cell.nmr_raw_spectrum_get()
y = val['yval'][:len(val['xval'])]
return (val['xval'], y)
@Command(result=TupleOf(ArrayOf(floating, maxlen=100000),
ArrayOf(floating, maxlen=100000)))
def get_processed_spectrum(self):
"""Get the processed spectrum."""
val = self.cell.cell.nmr_processed_spectrum_get()
x = val['xval'][:len(val['yval'])]
return (x, val['yval'])
@Command(result=TupleOf(ArrayOf(string, maxlen=100),
ArrayOf(floating, maxlen=100)))
def get_amplitude(self):
"""Last 20 amplitude datapoints."""
rv = self.cell.cell.nmr_paramlog_get('amplitude', 20)
x = [ str(timestamp) for timestamp in rv['xval']]
return (x,rv['yval'])
@Command(result=TupleOf(ArrayOf(string, maxlen=100),
ArrayOf(floating, maxlen=100)))
def get_phase(self):
"""Last 20 phase datapoints."""
val = self.cell.cell.nmr_paramlog_get('phase', 20)
return ([str(timestamp) for timestamp in val['xval']], val['yval'])
class FitParam(Readable):
value = Parameter('fitted value', unit='$', default=0.0)
sigma = Parameter('variance of the fitted value', FloatRange(), default=0.0)
param = Property('the parameter that should be accesssed',
StringType(), export=False)
cell = Attached(Cell)
@CommonReadHandler(['value', 'sigma'])
def read_amplitude(self):
ret = self.cell.cell.nmr_param_get(self.param)
self.value = ret['value']
self.sigma = ret['sigma']
# Commands
@Command(integral, result=TupleOf(ArrayOf(string),
ArrayOf(floating)))
def nmr_paramlog_get(self, n):
"""returns the log of the last 'n' values for this parameter"""
val = self.cell.cell.nmr_paramlog_get(self.param, n)
return ([str(timestamp) for timestamp in val['xval']], val['yval'])