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ultrasound
Author | SHA1 | Date | |
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![]() |
a1fa9f1cbb |
126
cfg/PEUS.cfg
Normal file
126
cfg/PEUS.cfg
Normal file
@ -0,0 +1,126 @@
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[NODE]
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id = ultrasound.psi.ch
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description = ultrasound settings
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[INTERFACE]
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uri = tcp://5000
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[f]
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class = secop_psi.ultrasound.Frequency
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description = ultrasound frequency and acquisition loop
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uri = serial:///dev/ttyS1
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pars = pars
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pollinterval = 0.1
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# this is the start time:
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time = 900
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size = 5000
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freq = 1.17568e+06
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basefreq = 4.14902e+07
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control = True
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amp = 5.0
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nr = 1000 #500 #300 #100 #50 #30 #10 #5 #3 #1 #1000 #500 #300 #100 #50 #30 #10 #5 #3 #1 #500
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sr = 32768 #16384
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plot = True
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maxstep = 100000
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bw = 10E6 #butter worth filter bandwidth
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# y scale for plot:
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maxy = 0.7
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# module to transmit curves:
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curves = curves
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[curves]
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class = secop_psi.ultrasound.Curves
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description = t, I, Q and pulse arrays for plot
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[roi0]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region in the control loop.
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# this is the center of roi:
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time = 2450
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size = 300
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main = f
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[roi1]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 1
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time = 5950
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size = 300
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main = f
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[roi2]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 2
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# enable = False
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time = 9475
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size = 300
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main = f
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[roi3]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 3
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#enable = False
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time = 12900
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size = 300
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main = f
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[roi4]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 4
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enable = True
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time = 16100
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size = 300
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main = f
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[roi5]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 5
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enable = False
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time = 4000
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size = 30
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main = f
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[roi6]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 6
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enable = False
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time = 4000
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size = 200
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main = f
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[roi7]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 7
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enable = False
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time = 4000
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size = 200
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main = f
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[roi8]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 8
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enable = False
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time = 4000
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size = 200
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main = f
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[roi9]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 9
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enable = False
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time = 4000
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size = 200
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main = f
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[delay]
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class = secop_psi.dg645.Delay
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description = delay line with 2 channels
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#uri = dil4-ts.psi.ch:3008
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uri = serial:///dev/ttyS2
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on1 = 1e-9
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on2 = 1E-9
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off1 = 400e-9
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off2 = 600e-9
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[pars]
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class = secop_psi.ultrasound.Pars
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description = SEA parameters
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63
cfg/RUS.cfg
Normal file
63
cfg/RUS.cfg
Normal file
@ -0,0 +1,63 @@
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[NODE]
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id = ultrasound.psi.ch
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description = resonant ultra sound setup
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[INTERFACE]
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uri = tcp://5000
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[f]
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class = secop_psi.ultrasound.Frequency
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description = ultrasound frequency and acquisition loop
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uri = serial:///dev/ttyS1
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pars = pars
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pollinterval = 0.1
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# this is the start time:
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time = 900
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size = 5000
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freq = 1.e+03
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basefreq = 1.E+3
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control = False
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rusmode = False
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amp = 2.5
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nr = 1 #500 #300 #100 #50 #30 #10 #5 #3 #1 #1000 #500 #300 #100 #50 #30 #10 #5 #3 #1 #500
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sr = 1E8 #16384
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plot = True
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maxstep = 100000
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bw = 10E6 #butter worth filter bandwidth
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# y scale for plot:
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maxy = 0.7
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# module to transmit curves:
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curves = curves
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[curves]
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class = secop_psi.ultrasound.Curves
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description = t, I, Q and pulse arrays for plot
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[roi0]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region in the control loop.
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# this is the center of roi:
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time = 300
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size = 5000
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main = f
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[roi1]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 1
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time = 100
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size = 300
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main = f
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[delay]
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class = secop_psi.dg645.Delay
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description = delay line with 2 channels
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#uri = dil4-ts.psi.ch:3008
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uri = serial:///dev/ttyS2
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on1 = 1e-9
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on2 = 1E-9
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off1 = 400e-9
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off2 = 600e-9
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[pars]
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class = secop_psi.ultrasound.Pars
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description = SEA parameters
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17
cfg/dg.cfg
Normal file
17
cfg/dg.cfg
Normal file
@ -0,0 +1,17 @@
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[node ultrasound.psi.ch]
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description = ultrasound settings
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[interface tcp]
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type = tcp
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bindto = 0.0.0.0
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bindport = 5000
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[module delay]
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class = secop_psi.dg645.Delay
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description = delay line with 2 channels
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#uri = dil4-ts.psi.ch:3008
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uri = serial:///dev/ttyS2
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on1 = 10e-9
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on2 = 1E-9
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off1 = 250e-9
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off2 = 550e-9
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126
cfg/ultrasound.cfg
Normal file
126
cfg/ultrasound.cfg
Normal file
@ -0,0 +1,126 @@
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[NODE]
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id = ultrasound.psi.ch
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description = ultrasound settings
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||||||
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||||||
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[INTERFACE]
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||||||
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uri = tcp://5000
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[f]
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class = secop_psi.ultrasound.Frequency
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description = ultrasound frequency and acquisition loop
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uri = serial:///dev/ttyS1
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pars = pars
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pollinterval = 0.1
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||||||
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# this is the start time:
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||||||
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time = 900
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||||||
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size = 5000
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freq = 1.17568e+06
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basefreq = 4.14902e+07
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control = True
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amp = 5.0
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nr = 1000 #500 #300 #100 #50 #30 #10 #5 #3 #1 #1000 #500 #300 #100 #50 #30 #10 #5 #3 #1 #500
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sr = 32768 #16384
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plot = True
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maxstep = 100000
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bw = 10E6 #butter worth filter bandwidth
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# y scale for plot:
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||||||
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maxy = 0.7
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||||||
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# module to transmit curves:
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||||||
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curves = curves
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[curves]
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class = secop_psi.ultrasound.Curves
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description = t, I, Q and pulse arrays for plot
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||||||
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||||||
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[roi0]
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||||||
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class = secop_psi.ultrasound.Roi
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||||||
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description = I/Q of region in the control loop.
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||||||
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# this is the center of roi:
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||||||
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time = 2450
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size = 300
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main = f
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[roi1]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 1
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time = 5950
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size = 300
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main = f
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[roi2]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 2
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# enable = False
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time = 9475
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size = 300
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main = f
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[roi3]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 3
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#enable = False
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time = 12900
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size = 300
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main = f
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[roi4]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 4
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enable = True
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time = 16100
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size = 300
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main = f
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[roi5]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 5
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enable = False
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time = 4000
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size = 30
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main = f
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[roi6]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 6
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enable = False
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time = 4000
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size = 200
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main = f
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[roi7]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 7
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enable = False
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time = 4000
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size = 200
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main = f
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[roi8]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 8
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enable = False
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time = 4000
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size = 200
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main = f
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[roi9]
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class = secop_psi.ultrasound.Roi
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description = I/Q of region 9
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enable = False
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time = 4000
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size = 200
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main = f
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[delay]
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class = secop_psi.dg645.Delay
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description = delay line with 2 channels
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#uri = dil4-ts.psi.ch:3008
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uri = serial:///dev/ttyS2
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on1 = 1e-9
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on2 = 1E-9
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off1 = 400e-9
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off2 = 600e-9
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[pars]
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class = secop_psi.ultrasound.Pars
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description = SEA parameters
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127
ftune.py
Normal file
127
ftune.py
Normal file
@ -0,0 +1,127 @@
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import PySimpleGUI as sg
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import time
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import sys
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sys.path.append(r'/Users/bartkowiak/Programs/frappy/frappy')
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from secop.client import SecopClient
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from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg
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import matplotlib.pyplot as plt
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from numpy.random import rand
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import numpy as np
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def draw_figure(canvas, figure):
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figure_canvas_agg = FigureCanvasTkAgg(figure, canvas)
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figure_canvas_agg.draw()
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figure_canvas_agg.get_tk_widget().pack(side='top', fill='both', expand=1)
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return figure_canvas_agg
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def upd_flim(inp):
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return int(inp)
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def connection_handler(sec,status,IP,port, cstate):
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if cstate == -1 and status == False:
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try :
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cstate = 1
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#sock.connect((IP,int(port)))
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sec = SecopClient(IP+':'+port)
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sec.connect()
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sec.setParameter('f','control',False)
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status = False
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except :
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cstate = -1
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status = True
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elif status == True and cstate == 1 :
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status = False
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sec.disconnect()
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#sock.close()
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cstate = -1
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return cstate, status,sec
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def new_xy(sec, cstate):
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xn = 0
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yn = 0
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if cstate == 1:
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try:
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xn = sec.getParameter('roi0','i')[0]
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yn = sec.getParameter('roi0','q')[0]
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except:
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pass
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return xn, yn
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def send_new_f(sec, cstate, freq):
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if cstate == 1:
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freq = sec.setParameter('f','basefreq',freq)
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return freq
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|
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|
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# THIS IS THE MAIN LOOP
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def main(): # define the main loop
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freq = '10000000'
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f_start = 39000000
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f_end = 42000000
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new_f = f_start
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down = True
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down2 = True
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cstate = -1
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tstart = time.time()
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x = np.array([])
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y = np.array([])
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IP = 'pc13252'
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port = '5000'
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sec = SecopClient(IP+':'+port)
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layout = [ [sg.Text('Frequency Tuner)')],
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[sg.Text('IP\t\t:',font= ("Helvetica",22)),sg.InputText(key='_IP_',default_text=IP,font= ("Helvetica",22),size=(15,1))],
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||||||
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[sg.Text('PORT\t\t:',font= ("Helvetica",22)),sg.InputText(key='_PORT_',default_text=port,font= ("Helvetica",22),size=(15,1)),sg.T(' ' * 41), sg.Button('connect',key='connect',font= ("Helvetica",22))],
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[sg.Text('Start Frequency\t:',font= ("Helvetica",22)),sg.InputText(key='_f_start_', default_text='39000000',font= ("Helvetica",22),size=(15,1))],
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[sg.Text('Stop Frequency\t:',font= ("Helvetica",22)),sg.InputText(key='_f_end_',default_text='45000000',font= ("Helvetica",22),size=(15,1))],
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||||||
|
[sg.Slider(range=(f_start, f_end),key='_SLtune_', orientation='h',font= ("Helvetica",22), size=(35, 20), default_value=f_start),sg.T(' ' * 2),sg.Button('sweep',key='sweep',font= ("Helvetica",22))],
|
||||||
|
[sg.Canvas(size=(640, 480), key='-CANVAS-')],
|
||||||
|
[sg.Button('Exit',font= ("Helvetica",22)),sg.T(' ' * 150),sg.Button('Clear Plot',key='clp',font= ("Helvetica",22))] ] # a couple of buttons
|
||||||
|
|
||||||
|
window = sg.Window('Frequency tuner', layout, finalize=True)
|
||||||
|
canvas_elem = window['-CANVAS-']
|
||||||
|
canvas = canvas_elem.TKCanvas
|
||||||
|
# draw the intitial scatter plot
|
||||||
|
fig, ax = plt.subplots()
|
||||||
|
ax.grid(True)
|
||||||
|
fig_agg = draw_figure(canvas, fig)
|
||||||
|
|
||||||
|
while True:
|
||||||
|
# Event Loop
|
||||||
|
event, values = window.Read(timeout=0.5)
|
||||||
|
if event in (None, 'Exit'): # checks if user wants to exit
|
||||||
|
if cstate == 1:
|
||||||
|
connection_handler(sec,True,values['_IP_'],values['_PORT_'],cstate)
|
||||||
|
break
|
||||||
|
|
||||||
|
if event == 'connect':
|
||||||
|
down = not down
|
||||||
|
window['connect'].Update(('disconnect','connect')[down])
|
||||||
|
cstate, down, sec = connection_handler(sec,down,values['_IP_'],values['_PORT_'],cstate)
|
||||||
|
if event == 'sweep':
|
||||||
|
down2 = not down2
|
||||||
|
window['sweep'].Update(('sweeping','sweep')[down2])
|
||||||
|
#if event in ('_SL8_','_SL6_','_SL4_','_SL2_'): # the two lines of code needed to get button and run command
|
||||||
|
#freq = update_freq(inp=[values['_SL8_'],values['_SL6_'],values['_SL4_'],values['_SL2_']])
|
||||||
|
if down2 == False:
|
||||||
|
if time.time() - tstart > 1.:
|
||||||
|
tstart = time.time()
|
||||||
|
new_f = int(int(values['_SLtune_']) + (int(values['_f_end_'])-int(values['_f_start_']))/200)
|
||||||
|
send_new_f(sec,cstate,new_f)
|
||||||
|
window['_SLtune_'].Update(value=new_f)
|
||||||
|
if event == 'clp':
|
||||||
|
x = np.array([])
|
||||||
|
y = np.array([])
|
||||||
|
window['_SLtune_'].Update(range=(int(values['_f_start_']),int(values['_f_end_'])))
|
||||||
|
xn,yn = new_xy(sec,cstate)
|
||||||
|
ax.cla()
|
||||||
|
ax.grid(True)
|
||||||
|
x = np.append(x,xn)
|
||||||
|
y = np.append(y,yn)
|
||||||
|
ax.plot(x, y)
|
||||||
|
fig_agg.draw()
|
||||||
|
|
||||||
|
window.Close()
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == '__main__':
|
||||||
|
main()
|
@ -44,3 +44,4 @@ ERROR = Drivable.Status.ERROR
|
|||||||
WARN = Drivable.Status.WARN
|
WARN = Drivable.Status.WARN
|
||||||
BUSY = Drivable.Status.BUSY
|
BUSY = Drivable.Status.BUSY
|
||||||
IDLE = Drivable.Status.IDLE
|
IDLE = Drivable.Status.IDLE
|
||||||
|
DISABLED = Drivable.Status.DISABLED
|
||||||
|
@ -760,7 +760,7 @@ class ArrayOf(DataType):
|
|||||||
|
|
||||||
def __call__(self, value):
|
def __call__(self, value):
|
||||||
"""validate an external representation to an internal one"""
|
"""validate an external representation to an internal one"""
|
||||||
if isinstance(value, (tuple, list)):
|
try:
|
||||||
# check number of elements
|
# check number of elements
|
||||||
if self.minlen is not None and len(value) < self.minlen:
|
if self.minlen is not None and len(value) < self.minlen:
|
||||||
raise BadValueError(
|
raise BadValueError(
|
||||||
@ -768,11 +768,12 @@ class ArrayOf(DataType):
|
|||||||
self.minlen)
|
self.minlen)
|
||||||
if self.maxlen is not None and len(value) > self.maxlen:
|
if self.maxlen is not None and len(value) > self.maxlen:
|
||||||
raise BadValueError(
|
raise BadValueError(
|
||||||
'Array too big, holds at most %d elements!' % self.minlen)
|
'Array too big, holds at most %d elements!' % self.maxlen)
|
||||||
# apply subtype valiation to all elements and return as list
|
# apply subtype valdiation to all elements and return as list
|
||||||
return tuple(self.members(elem) for elem in value)
|
return tuple(self.members(elem) for elem in value)
|
||||||
raise BadValueError(
|
except TypeError:
|
||||||
'Can not convert %s to ArrayOf DataType!' % repr(value))
|
raise BadValueError('%s can not be converted to ArrayOf DataType!'
|
||||||
|
% type(value).__name__) from None
|
||||||
|
|
||||||
def export_value(self, value):
|
def export_value(self, value):
|
||||||
"""returns a python object fit for serialisation"""
|
"""returns a python object fit for serialisation"""
|
||||||
@ -842,6 +843,7 @@ class TupleOf(DataType):
|
|||||||
return tuple(sub(elem)
|
return tuple(sub(elem)
|
||||||
for sub, elem in zip(self.members, value))
|
for sub, elem in zip(self.members, value))
|
||||||
except Exception as exc:
|
except Exception as exc:
|
||||||
|
print(value)
|
||||||
raise BadValueError('Can not validate:', str(exc)) from None
|
raise BadValueError('Can not validate:', str(exc)) from None
|
||||||
|
|
||||||
def export_value(self, value):
|
def export_value(self, value):
|
||||||
|
@ -47,7 +47,7 @@ class SilentError(CommunicationFailedError):
|
|||||||
|
|
||||||
class HasIO(Module):
|
class HasIO(Module):
|
||||||
"""Mixin for modules using a communicator"""
|
"""Mixin for modules using a communicator"""
|
||||||
io = Attached()
|
io = Attached(mandatory=False)
|
||||||
uri = Property('uri for automatic creation of the attached communication module',
|
uri = Property('uri for automatic creation of the attached communication module',
|
||||||
StringType(), default='')
|
StringType(), default='')
|
||||||
|
|
||||||
|
@ -500,10 +500,11 @@ class Module(HasAccessibles):
|
|||||||
# TODO: remove readerror 'property' and replace value with exception
|
# TODO: remove readerror 'property' and replace value with exception
|
||||||
pobj = self.parameters[pname]
|
pobj = self.parameters[pname]
|
||||||
timestamp = timestamp or time.time()
|
timestamp = timestamp or time.time()
|
||||||
changed = pobj.value != value
|
|
||||||
try:
|
try:
|
||||||
|
value = pobj.datatype(value)
|
||||||
|
changed = pobj.value != value
|
||||||
# store the value even in case of error
|
# store the value even in case of error
|
||||||
pobj.value = pobj.datatype(value)
|
pobj.value = value
|
||||||
except Exception as e:
|
except Exception as e:
|
||||||
if isinstance(e, DiscouragedConversion):
|
if isinstance(e, DiscouragedConversion):
|
||||||
if DiscouragedConversion.log_message:
|
if DiscouragedConversion.log_message:
|
||||||
|
@ -149,6 +149,9 @@ class Parameter(Accessible):
|
|||||||
|
|
||||||
default None: write if given in config''', NoneOr(BoolType()),
|
default None: write if given in config''', NoneOr(BoolType()),
|
||||||
export=False, default=None, settable=False)
|
export=False, default=None, settable=False)
|
||||||
|
# used in NICOS only ...
|
||||||
|
nicos_category = Property(
|
||||||
|
'''NICOS parameter category''', StringType(), export=True, default='')
|
||||||
|
|
||||||
# used on the instance copy only
|
# used on the instance copy only
|
||||||
value = None
|
value = None
|
||||||
|
@ -6,15 +6,17 @@ Created on Tue Nov 26 15:42:43 2019
|
|||||||
"""
|
"""
|
||||||
|
|
||||||
|
|
||||||
|
import sys
|
||||||
|
import atexit
|
||||||
|
import signal
|
||||||
|
import time
|
||||||
import numpy as np
|
import numpy as np
|
||||||
import ctypes as ct
|
import ctypes as ct
|
||||||
import time
|
|
||||||
from numpy import sqrt, arctan2, sin, cos
|
from numpy import sqrt, arctan2, sin, cos
|
||||||
|
import scipy.signal
|
||||||
|
|
||||||
#from pylab import *
|
#from pylab import *
|
||||||
|
|
||||||
from scipy import signal
|
|
||||||
|
|
||||||
#ADQAPI = ct.cdll.LoadLibrary("ADQAPI.dll")
|
#ADQAPI = ct.cdll.LoadLibrary("ADQAPI.dll")
|
||||||
ADQAPI = ct.cdll.LoadLibrary("libadq.so.0")
|
ADQAPI = ct.cdll.LoadLibrary("libadq.so.0")
|
||||||
|
|
||||||
@ -37,7 +39,7 @@ ADQ_CHANNELS_MASK = 0x3
|
|||||||
def butter_lowpass(cutoff, sr, order=5):
|
def butter_lowpass(cutoff, sr, order=5):
|
||||||
nyq = 0.5 * sr
|
nyq = 0.5 * sr
|
||||||
normal_cutoff = cutoff / nyq
|
normal_cutoff = cutoff / nyq
|
||||||
b, a = signal.butter(order, normal_cutoff, btype = 'low', analog = False)
|
b, a = scipy.signal.butter(order, normal_cutoff, btype = 'low', analog = False)
|
||||||
return b, a
|
return b, a
|
||||||
|
|
||||||
|
|
||||||
@ -125,6 +127,8 @@ class Adq(object):
|
|||||||
# print('SetTriggerThresholdVoltage failed.')
|
# print('SetTriggerThresholdVoltage failed.')
|
||||||
print("CHANNEL:"+str(ct.c_int(ADQAPI.ADQ_GetLvlTrigChannel(self.adq_cu, self.adq_num))))
|
print("CHANNEL:"+str(ct.c_int(ADQAPI.ADQ_GetLvlTrigChannel(self.adq_cu, self.adq_num))))
|
||||||
self.setup_target_buffers()
|
self.setup_target_buffers()
|
||||||
|
atexit.register(self.deletecu)
|
||||||
|
signal.signal(signal.SIGTERM, lambda *_: sys.exit(0))
|
||||||
|
|
||||||
def setup_target_buffers(self):
|
def setup_target_buffers(self):
|
||||||
# Setup target buffers for data
|
# Setup target buffers for data
|
||||||
@ -139,9 +143,10 @@ class Adq(object):
|
|||||||
ADQAPI.ADQ_MultiRecordClose(self.adq_cu, self.adq_num);
|
ADQAPI.ADQ_MultiRecordClose(self.adq_cu, self.adq_num);
|
||||||
# Delete ADQControlunit
|
# Delete ADQControlunit
|
||||||
ADQAPI.DeleteADQControlUnit(self.adq_cu)
|
ADQAPI.DeleteADQControlUnit(self.adq_cu)
|
||||||
|
print('ADQ closed')
|
||||||
|
|
||||||
def start(self):
|
def start(self):
|
||||||
"""start datat acquisition"""
|
"""start data acquisition"""
|
||||||
# samples_per_records = samples_per_record/number_of_records
|
# samples_per_records = samples_per_record/number_of_records
|
||||||
# Change number of pulses to be acquired acording to how many records are taken
|
# Change number of pulses to be acquired acording to how many records are taken
|
||||||
# Start acquisition
|
# Start acquisition
|
||||||
@ -177,52 +182,7 @@ class Adq(object):
|
|||||||
def acquire(self):
|
def acquire(self):
|
||||||
self.start()
|
self.start()
|
||||||
return self.getdata()
|
return self.getdata()
|
||||||
'''
|
|
||||||
def average(self, data):
|
|
||||||
#Average over records
|
|
||||||
return [data[ch].sum(axis=0) / self.number_of_records for ch in range(2)]
|
|
||||||
|
|
||||||
def iq(self, channel, f_LO):
|
|
||||||
newx = np.linspace(0, self.samples_per_record /2, self.samples_per_record)
|
|
||||||
s0 = channel /((2**16)/2)*0.5*np.exp(1j*2*np.pi*f_LO/(1e3)*newx)
|
|
||||||
I0 = s0.real
|
|
||||||
Q0 = s0.imag
|
|
||||||
return I0, Q0
|
|
||||||
|
|
||||||
|
|
||||||
def fitting(self, data, f_LO, ti, tf):
|
|
||||||
# As long as data[0] is the pulse
|
|
||||||
si = 2*ti #Those are for fitting the pulse
|
|
||||||
sf = 2*tf
|
|
||||||
phase = np.zeros(self.number_of_records)
|
|
||||||
amplitude = np.zeros(self.number_of_records)
|
|
||||||
offset = np.zeros(self.number_of_records)
|
|
||||||
|
|
||||||
for i in range(self.number_of_records):
|
|
||||||
phase[i], amplitude[i] = sineW(data[0][i][si:sf],f_LO*1e-9,ti,tf)
|
|
||||||
offset[i] = np.average(data[0][i][si:sf])
|
|
||||||
return phase, amplitude, offset
|
|
||||||
|
|
||||||
|
|
||||||
def waveIQ(self, channel,ti,f_LO):
|
|
||||||
#channel is not the sample data
|
|
||||||
t = np.linspace(0, self.samples_per_record /2, self.samples_per_record + 1)[:-1]
|
|
||||||
si = 2*ti # Again that is where the wave pulse starts
|
|
||||||
cwi = np.zeros((self.number_of_records,self.samples_per_record))
|
|
||||||
cwq = np.zeros((self.number_of_records,self.samples_per_record))
|
|
||||||
iq = np.zeros((self.number_of_records,self.samples_per_record))
|
|
||||||
q = np.zeros((self.number_of_records,self.samples_per_record))
|
|
||||||
for i in range(self.number_of_records):
|
|
||||||
cwi[i] = np.zeros(self.samples_per_record)
|
|
||||||
cwq[i] = np.zeros(self.samples_per_record)
|
|
||||||
cwi[i] = amplitude[i]*sin(t[si:]*f_LO*1e-9*2*np.pi+phase[i]*np.pi/180)+bias[i]
|
|
||||||
cwq[i] = amplitude[i]*sin(t[si:]*f_LO*1e-9*(2*np.pi+(phase[i]+90)*np.pi/180))+bias[i]
|
|
||||||
|
|
||||||
iq[i] = channel[i]*cwi[i]
|
|
||||||
q[i] = channel[i]*cwq[i]
|
|
||||||
|
|
||||||
return iq,q
|
|
||||||
'''
|
|
||||||
def sinW(self,sig,freq,ti,tf):
|
def sinW(self,sig,freq,ti,tf):
|
||||||
# sig: signal array
|
# sig: signal array
|
||||||
# freq
|
# freq
|
||||||
@ -262,9 +222,9 @@ class Adq(object):
|
|||||||
def filtro(self, iorq, cutoff):
|
def filtro(self, iorq, cutoff):
|
||||||
b, a = butter_lowpass(cutoff, self.samp_freq*1e9)
|
b, a = butter_lowpass(cutoff, self.samp_freq*1e9)
|
||||||
|
|
||||||
#ifi = np.array(signal.filtfilt(b,a,iorq[0]))
|
#ifi = np.array(scipy.signal.filtfilt(b,a,iorq[0]))
|
||||||
#qf = np.array(signal.filtfilt(b,a,iorq[1]))
|
#qf = np.array(scipy.signal.filtfilt(b,a,iorq[1]))
|
||||||
iqf = [signal.filtfilt(b,a,iorq[i]) for i in np.arange(len(iorq))]
|
iqf = [scipy.signal.filtfilt(b,a,iorq[i]) for i in np.arange(len(iorq))]
|
||||||
|
|
||||||
return iqf
|
return iqf
|
||||||
|
|
||||||
@ -276,12 +236,15 @@ class Adq(object):
|
|||||||
|
|
||||||
def gates_and_curves(self, data, freq, pulse, roi):
|
def gates_and_curves(self, data, freq, pulse, roi):
|
||||||
"""return iq values of rois and prepare plottable curves for iq"""
|
"""return iq values of rois and prepare plottable curves for iq"""
|
||||||
|
self.ndecimate = int(round(2E9/freq))
|
||||||
times = []
|
times = []
|
||||||
times.append(('aviq', time.time()))
|
times.append(('aviq', time.time()))
|
||||||
iq = self.averageiq(data,freq*1e-9,*pulse)
|
iq = self.averageiq(data,freq*1e-9,*pulse)
|
||||||
times.append(('filtro', time.time()))
|
times.append(('filtro', time.time()))
|
||||||
iqf = self.filtro(iq,self.bw_cutoff)
|
iqf = self.filtro(iq,self.bw_cutoff)
|
||||||
m = len(iqf[0]) // self.ndecimate
|
m = len(iqf[0]) // self.ndecimate
|
||||||
|
ll = m * self.ndecimate
|
||||||
|
iqf = [iqfx[0:ll] for iqfx in iqf]
|
||||||
times.append(('iqdec', time.time()))
|
times.append(('iqdec', time.time()))
|
||||||
iqd = np.average(np.resize(iqf, (2, m, self.ndecimate)), axis=2)
|
iqd = np.average(np.resize(iqf, (2, m, self.ndecimate)), axis=2)
|
||||||
t_axis = np.arange(m) * self.ndecimate / self.samp_freq
|
t_axis = np.arange(m) * self.ndecimate / self.samp_freq
|
||||||
|
@ -30,7 +30,8 @@ import numpy as np
|
|||||||
import secop_psi.iqplot as iqplot
|
import secop_psi.iqplot as iqplot
|
||||||
from secop_psi.adq_mr import Adq
|
from secop_psi.adq_mr import Adq
|
||||||
from secop.core import Attached, BoolType, Done, FloatRange, HasIO, \
|
from secop.core import Attached, BoolType, Done, FloatRange, HasIO, \
|
||||||
IntRange, Module, Parameter, Readable, StringIO, StringType
|
IntRange, Module, Parameter, Readable, StringIO, StringType, \
|
||||||
|
IDLE, DISABLED, TupleOf, ArrayOf
|
||||||
from secop.properties import Property
|
from secop.properties import Property
|
||||||
|
|
||||||
|
|
||||||
@ -54,7 +55,6 @@ class Roi(Readable):
|
|||||||
time = Parameter('start time', FloatRange(unit='nsec'), readonly=False)
|
time = Parameter('start time', FloatRange(unit='nsec'), readonly=False)
|
||||||
size = Parameter('interval (symmetric around time)', FloatRange(unit='nsec'), readonly=False)
|
size = Parameter('interval (symmetric around time)', FloatRange(unit='nsec'), readonly=False)
|
||||||
enable = Parameter('calculate this roi', BoolType(), readonly=False, default=True)
|
enable = Parameter('calculate this roi', BoolType(), readonly=False, default=True)
|
||||||
#status = Parameter(export=False)
|
|
||||||
pollinterval = Parameter(export=False)
|
pollinterval = Parameter(export=False)
|
||||||
|
|
||||||
interval = (0,0)
|
interval = (0,0)
|
||||||
@ -67,6 +67,9 @@ class Roi(Readable):
|
|||||||
def calc_interval(self):
|
def calc_interval(self):
|
||||||
self.interval = (self.time - 0.5 * self.size, self.time + 0.5 * self.size)
|
self.interval = (self.time - 0.5 * self.size, self.time + 0.5 * self.size)
|
||||||
|
|
||||||
|
def read_status(self):
|
||||||
|
return (IDLE, '') if self.enable else (DISABLED, 'disabled')
|
||||||
|
|
||||||
def write_time(self, value):
|
def write_time(self, value):
|
||||||
self.time = value
|
self.time = value
|
||||||
self.calc_interval()
|
self.calc_interval()
|
||||||
@ -84,7 +87,7 @@ class Pars(Module):
|
|||||||
timestamp = Parameter('unix timestamp', StringType(), default='0', readonly=False)
|
timestamp = Parameter('unix timestamp', StringType(), default='0', readonly=False)
|
||||||
temperature = Parameter('T', FloatRange(unit='K'), default=0, readonly=False)
|
temperature = Parameter('T', FloatRange(unit='K'), default=0, readonly=False)
|
||||||
mf = Parameter('field', FloatRange(unit='T'), default=0, readonly=False)
|
mf = Parameter('field', FloatRange(unit='T'), default=0, readonly=False)
|
||||||
sr = Parameter('rotaion angle', FloatRange(unit='deg'), default=0, readonly=False)
|
sr = Parameter('rotation angle', FloatRange(unit='deg'), default=0, readonly=False)
|
||||||
|
|
||||||
|
|
||||||
class FreqStringIO(StringIO):
|
class FreqStringIO(StringIO):
|
||||||
@ -93,16 +96,19 @@ class FreqStringIO(StringIO):
|
|||||||
|
|
||||||
class Frequency(HasIO, Readable):
|
class Frequency(HasIO, Readable):
|
||||||
pars = Attached()
|
pars = Attached()
|
||||||
sr = Property('samples per record', datatype=IntRange(), default=16384)
|
curves = Attached(mandatory=False)
|
||||||
|
# sr = Property('samples per record', datatype=IntRange(), default=16384)
|
||||||
maxy = Property('plot y scale', datatype=FloatRange(), default=0.5)
|
maxy = Property('plot y scale', datatype=FloatRange(), default=0.5)
|
||||||
|
|
||||||
value = Parameter('frequency@I,q', datatype=FloatRange(unit='Hz'), default=0)
|
value = Parameter('frequency@I,q', datatype=FloatRange(unit='Hz'), default=0)
|
||||||
basefreq = Parameter('base frequency', FloatRange(unit='Hz'), readonly=False)
|
basefreq = Parameter('base frequency', FloatRange(unit='Hz'), readonly=False)
|
||||||
nr = Parameter('number of records', datatype=IntRange(1,10000), default=500)
|
nr = Parameter('number of records', datatype=IntRange(1,10000), default=500)
|
||||||
|
sr = Parameter('samples per record', datatype=IntRange(1,1E9), default=16384)
|
||||||
freq = Parameter('target frequency', FloatRange(unit='Hz'), readonly=False)
|
freq = Parameter('target frequency', FloatRange(unit='Hz'), readonly=False)
|
||||||
bw = Parameter('bandwidth lowpassfilter', datatype=FloatRange(unit='Hz'),default=10E6)
|
bw = Parameter('bandwidth lowpassfilter', datatype=FloatRange(unit='Hz'),default=10E6)
|
||||||
amp = Parameter('amplitude', FloatRange(unit='dBm'), readonly=False)
|
amp = Parameter('amplitude', FloatRange(unit='dBm'), readonly=False)
|
||||||
control = Parameter('control loop on?', BoolType(), readonly=False, default=True)
|
control = Parameter('control loop on?', BoolType(), readonly=False, default=True)
|
||||||
|
rusmode = Parameter('RUS mode on?', BoolType(), readonly=False, default=False)
|
||||||
time = Parameter('pulse start time', FloatRange(unit='nsec'),
|
time = Parameter('pulse start time', FloatRange(unit='nsec'),
|
||||||
readonly=False)
|
readonly=False)
|
||||||
size = Parameter('pulse length (starting from time)', FloatRange(unit='nsec'),
|
size = Parameter('pulse length (starting from time)', FloatRange(unit='nsec'),
|
||||||
@ -130,6 +136,7 @@ class Frequency(HasIO, Readable):
|
|||||||
self.adq = Adq(self.nr, self.sr, self.bw)
|
self.adq = Adq(self.nr, self.sr, self.bw)
|
||||||
self.roilist = []
|
self.roilist = []
|
||||||
self.write_nr(self.nr)
|
self.write_nr(self.nr)
|
||||||
|
self.write_sr(self.sr)
|
||||||
self.skipctrl = 0
|
self.skipctrl = 0
|
||||||
self.plotter = iqplot.Plot(self.maxy)
|
self.plotter = iqplot.Plot(self.maxy)
|
||||||
self.calc_interval()
|
self.calc_interval()
|
||||||
@ -151,6 +158,9 @@ class Frequency(HasIO, Readable):
|
|||||||
# self.pollinterval = value * 0.0001
|
# self.pollinterval = value * 0.0001
|
||||||
return value
|
return value
|
||||||
|
|
||||||
|
def write_sr(self, value):
|
||||||
|
return value
|
||||||
|
|
||||||
def register_roi(self, roi):
|
def register_roi(self, roi):
|
||||||
self.roilist.append(roi)
|
self.roilist.append(roi)
|
||||||
|
|
||||||
@ -176,7 +186,11 @@ class Frequency(HasIO, Readable):
|
|||||||
"""main poll loop body"""
|
"""main poll loop body"""
|
||||||
if self.lastfreq is None:
|
if self.lastfreq is None:
|
||||||
self.lastfreq = self.set_freq()
|
self.lastfreq = self.set_freq()
|
||||||
|
if self.rusmode:
|
||||||
|
self.sr = int(12e9/self.lastfreq) #picking up 12 period at the ith frequency in the time scale
|
||||||
|
# self.adq.samples_per_record = self.sr
|
||||||
self.adq.start()
|
self.adq.start()
|
||||||
|
|
||||||
if self.starttime is None:
|
if self.starttime is None:
|
||||||
self.starttime = time.time()
|
self.starttime = time.time()
|
||||||
times = []
|
times = []
|
||||||
@ -200,6 +214,8 @@ class Frequency(HasIO, Readable):
|
|||||||
|
|
||||||
gates = self.adq.gates_and_curves(data, freq, self.interval,
|
gates = self.adq.gates_and_curves(data, freq, self.interval,
|
||||||
[r.interval for r in roilist])
|
[r.interval for r in roilist])
|
||||||
|
if self.curves: # if attached Curves module is defined, update it
|
||||||
|
self.curves.value = self.adq.curves
|
||||||
if self.save:
|
if self.save:
|
||||||
times.append(('save',time.time()))
|
times.append(('save',time.time()))
|
||||||
tdata, idata, qdata, pdata = self.adq.curves
|
tdata, idata, qdata, pdata = self.adq.curves
|
||||||
@ -259,3 +275,9 @@ class Frequency(HasIO, Readable):
|
|||||||
self.freq = sorted((self.freq - self.maxstep, newfreq, self.freq + self.maxstep))[1]
|
self.freq = sorted((self.freq - self.maxstep, newfreq, self.freq + self.maxstep))[1]
|
||||||
#print(times)
|
#print(times)
|
||||||
return Done
|
return Done
|
||||||
|
|
||||||
|
|
||||||
|
class Curves(Readable):
|
||||||
|
value = Parameter("t, i, q, pulse curves",
|
||||||
|
TupleOf(*[ArrayOf(FloatRange(), 0, 16283) for _ in range(4)]), default=[[]] * 4)
|
||||||
|
|
||||||
|
Loading…
x
Reference in New Issue
Block a user