diff --git a/pom.xml b/pom.xml
index 894cd90..170cfb9 100644
--- a/pom.xml
+++ b/pom.xml
@@ -3,7 +3,7 @@
4.0.0
ch.psi
imagej.hdf5
- 0.11.0
+ 0.12.0
diff --git a/src/main/java/ch/psi/imagej/hdf5/HDF5Reader.java b/src/main/java/ch/psi/imagej/hdf5/HDF5Reader.java
index 85cefd2..0f90ae4 100644
--- a/src/main/java/ch/psi/imagej/hdf5/HDF5Reader.java
+++ b/src/main/java/ch/psi/imagej/hdf5/HDF5Reader.java
@@ -46,7 +46,12 @@ public class HDF5Reader implements PlugIn {
* dataset=/your/path/to/dataset
*
*/
+
public ImageStack open(String arg, boolean interactive, String filename, String nameOfDataset, boolean virtualstack) {
+ return open(arg, interactive, filename, nameOfDataset, virtualstack, true);
+ }
+
+ public ImageStack open(String arg, boolean interactive, String filename, String nameOfDataset, boolean virtualstack, boolean showImage) {
// Map arguments = HDF5Reader.parseArguments(arg);
@@ -118,7 +123,9 @@ public class HDF5Reader implements PlugIn {
ImagePlus imp = new ImagePlus(filename, stack);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
stacks.add(stack);
return stack; // TODO should return stacks instead of stack
@@ -166,7 +173,9 @@ public class HDF5Reader implements PlugIn {
imp = new CompositeImage(imp, CompositeImage.COMPOSITE);
imp.setOpenAsHyperStack(true);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
} else if (numberOfDimensions == 4 && dimensions[3] == 3) {
logger.info("3D RGB Image");
@@ -194,7 +203,9 @@ public class HDF5Reader implements PlugIn {
imp = new CompositeImage(imp, CompositeImage.COMPOSITE);
imp.setOpenAsHyperStack(true);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
} else if (numberOfDimensions == 4) {
logger.info("4D Image (HyperVolume)");
@@ -224,7 +235,9 @@ public class HDF5Reader implements PlugIn {
imp.setDimensions(1, (int) dimensions[1], (int) dimensions[0]);
imp.setOpenAsHyperStack(true);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
} else if (numberOfDimensions == 3 && dimensions[2] == 3) {
logger.info("2D RGB Image");
@@ -247,7 +260,9 @@ public class HDF5Reader implements PlugIn {
imp = new CompositeImage(imp, CompositeImage.COMPOSITE);
imp.setOpenAsHyperStack(true);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
} else if (numberOfDimensions == 3) {
logger.info("3D Image");
@@ -322,7 +337,9 @@ public class HDF5Reader implements PlugIn {
stacks.add(stack);
ImagePlus imp = new ImagePlusHDF5(filename + " " + datasetName, stack);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
} else if (numberOfDimensions == 2) {
logger.info("2D Image");
@@ -335,7 +352,9 @@ public class HDF5Reader implements PlugIn {
ImagePlus imp = new ImagePlus(filename + " " + datasetName, stack);
imp.resetDisplayRange();
- imp.show();
+ if(showImage) {
+ imp.show();
+ }
} else {
IJ.showStatus("Variable Dimension " + numberOfDimensions + " not supported");